Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G005000.1 | Wheat | nucleus | 89.58 | 88.84 |
| TraesCS2D01G007100.1 | Wheat | nucleus | 89.97 | 88.16 |
| HORVU2Hr1G000940.11 | Barley | nucleus | 86.57 | 85.76 |
| OQU85110 | Sorghum | nucleus | 51.09 | 48.16 |
| Zm00001d016804_P002 | Maize | nucleus | 44.85 | 44.85 |
| VIT_18s0001g01700.t01 | Wine grape | nucleus | 19.89 | 34.26 |
| TraesCS7B01G354300.1 | Wheat | nucleus | 5.63 | 29.71 |
| Solyc04g057880.2.1 | Tomato | nucleus | 22.62 | 29.08 |
| TraesCS5B01G177800.2 | Wheat | nucleus | 5.63 | 27.9 |
| Solyc06g059960.2.1 | Tomato | nucleus | 23.96 | 25.83 |
| CDX87527 | Canola | nucleus | 23.62 | 25.59 |
| Bra015678.1-P | Field mustard | nucleus | 23.62 | 25.59 |
| GSMUA_Achr9P08570_001 | Banana | nucleus | 28.86 | 25.57 |
| CDX88357 | Canola | nucleus | 23.51 | 25.47 |
| AT1G77300.1 | Thale cress | nucleus | 23.45 | 23.32 |
| KRH53306 | Soybean | nucleus | 26.18 | 23.04 |
| KRH64610 | Soybean | nucleus | 26.63 | 22.94 |
| TraesCS2B01G317900.1 | Wheat | nucleus | 6.69 | 22.68 |
| TraesCS6B01G249100.1 | Wheat | nucleus | 7.52 | 18.1 |
| TraesCS7B01G028200.2 | Wheat | nucleus | 5.46 | 11.05 |
| TraesCS4B01G181400.3 | Wheat | nucleus, plastid | 5.07 | 10.22 |
| TraesCS7B01G028500.2 | Wheat | nucleus | 4.4 | 9.85 |
| TraesCS3B01G161800.3 | Wheat | plastid | 4.96 | 8.94 |
| TraesCS3B01G265800.1 | Wheat | nucleus | 4.9 | 8.56 |
| TraesCS5B01G163000.1 | Wheat | nucleus, plastid | 5.13 | 8.47 |
| TraesCS5B01G046300.1 | Wheat | nucleus, plastid | 6.02 | 8.34 |
| TraesCS5B01G360200.1 | Wheat | plastid | 7.69 | 7.15 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | Gene3D:3.30.40.100 | InterPro:AWS_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | InterPro:IPR001214 | InterPro:IPR003616 |
| InterPro:IPR006560 | InterPro:IPR011124 | PFAM:PF00856 | PFAM:PF07496 | PFscan:PS50280 | PFscan:PS50868 |
| PFscan:PS51050 | PFscan:PS51215 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF466 | InterPro:Post-SET_dom | InterPro:SET_dom |
| SMART:SM00317 | SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 | EnsemblPlantsGene:TraesCS2B01G015500 | EnsemblPlants:TraesCS2B01G015500.1 |
| InterPro:Znf_CW | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:7428456..7443325
Molecular Weight (calculated)
198585.0 Da
IEP (calculated)
7.172
GRAVY (calculated)
-0.721
Length
1795 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVDKAAEVSQ RDVAAEGVVL WDEALVKTTT PEDLQMRCKE LRCYNDVPVM CLKKDVNCEL ENDGLLPKLE AEVSRPARQD SVPLTFGRNL AVSLDAKAGQ
0101: IGEVSEHRTG MERVACGSQG GGMLSFDRGF WKGAVGDKNQ FFRMEGCHEN GGLSDLGRHG TEKFPRGADG LSFINANHEL GSDCFLANID EEVSFPVDEA
0201: SAPSFYKSHT DVIVEDSKSH IENLTQDSVE GDMLSFESEA SFRTEVSGKE NQHHRMAVSK GQISSVCKDE NNASLNACGL FPEIEVPLQQ ADKKYKFFEL
0301: PPEIYLARPS YNPSCSDGLG CSGKESSAVY VGHQDSSGIK LRCPDRLVQE LNAYNSFVVK PCSADFVGNA NEQESQNQIS ESLNASNRRN PRRAASSRNR
0401: APVEHDQINK GSSSTCKSKK VESSCSLVES TLIKFPNKTT KVRIYINRPV NSTAWGSLEK LADGFGQNCE PSTSNSHLIS LENGGRSNKR SGKKEQPIVR
0501: KARSSRCPKN KFPAFSVTRY APDELNGEPT FSVMDGAYGY PEGYRGNFPK LAPHAFLNVS DDARRTVQHT SIQTDMQQLD RCVESVAQET CPAYMCGDFA
0601: KSISEPSLNN AGVGFSPDSV LEVASVTCEN NASASHDVKL RGNPSYPAAL TGSDLHASDL CTSDFGKNHA SSSTDFEQQP KTVRGDETDD NTRSEEINQS
0701: HAIIGYVGEG KVQGLEKSNA VRKTKMLEKQ KERKKDGIKG NNIRDGSSTK ISSSEASKYR AFSDDPSSLV SSGPLKFSSC FEVVTSATQG ISMHEHGWVQ
0801: GPSVIGKEKT SALNNVKSPR CKKSDGLRGK KDMVRDPHVK QKSKKKNIAD DIFIDYGSST LPYHLTTDLA TSHTNEQGYH SPAIEFTLQN PAAISTELLG
0901: NAACLTDGAS VPQPKRAAWA CCDDCQKWRC IPSELADVIG ENRWTCKDND DKAFADCSIP QAKTNAEINA ELELSDASAD EADKDGSNSK ASRAPSWTNL
1001: RSNTYLHRNR RNQSIDESMV CNCKPPQDGR MGCRDGCLNR MLNIECAKRT CPCEEQCSNQ QFQRRNYAKI AWFHSGKKGY GLQLLEEVPE GRFLIEYVGE
1101: VLDITTYESR QRDYACKSKK HFYFMALDGG EVIDACTKGN LGRFINHSCS PNCRTEKWMV NGEVCIGIFA MRNIKKGEEL TFDYNYVRVS GAAPQKCFCG
1201: TAKCRGYIGG DISGSGISIQ HVAEAEHFEP MVTYKDAEEM LGNACSHGAN PSVAELQHET SIQQEDSNSC PPVTPDSEPH QTSPILFDDS ELENSWEMWS
1301: PQDAEDPTRT PVHVPRTIDS TLQQLPVHDT EPLELLPKAP NTMDGSNAPN VNQSAGSSDL GLNLVVPGFH AKKKNNLKDQ RDVKSSSCSI NNENTLGVEG
1401: RLNNLLDRDG GISRRKDSAN EYLKLLIFVI PAAHDNTTAE QENSVTAVEC DNARGTSKSA RDLSLILDAL LKTKSRSVLL DIINMNGLQM LHNILKQNRN
1501: TFLRRPIIRK LLKVLEFLAL KGILRAEKIN EEAPREKMER FRDSMLKLTR HNDKQVQTIA RQFCEKWIHP YMDGPVSTSK WYTESHYRRK RKSRWDYQPE
1601: SHYKMVGSQV RKVYGELGLQ SGLTRNKSQP VTGSSSTGTD DDVPPGFEPQ QGRYVAPGFC LPNSNISYGI PIARVEHLGT PEVEGGGNCG QKWKVAPGVP
1701: FIPFPQLQRG SPCPSTSTQM PRHDAMRQNN SSGYRGRGFD RGGRVQRNGR NGARSRYPYD HHQGRRFPSN HHRSERWQPW PQEQHDGGSG SRGRQ
0101: IGEVSEHRTG MERVACGSQG GGMLSFDRGF WKGAVGDKNQ FFRMEGCHEN GGLSDLGRHG TEKFPRGADG LSFINANHEL GSDCFLANID EEVSFPVDEA
0201: SAPSFYKSHT DVIVEDSKSH IENLTQDSVE GDMLSFESEA SFRTEVSGKE NQHHRMAVSK GQISSVCKDE NNASLNACGL FPEIEVPLQQ ADKKYKFFEL
0301: PPEIYLARPS YNPSCSDGLG CSGKESSAVY VGHQDSSGIK LRCPDRLVQE LNAYNSFVVK PCSADFVGNA NEQESQNQIS ESLNASNRRN PRRAASSRNR
0401: APVEHDQINK GSSSTCKSKK VESSCSLVES TLIKFPNKTT KVRIYINRPV NSTAWGSLEK LADGFGQNCE PSTSNSHLIS LENGGRSNKR SGKKEQPIVR
0501: KARSSRCPKN KFPAFSVTRY APDELNGEPT FSVMDGAYGY PEGYRGNFPK LAPHAFLNVS DDARRTVQHT SIQTDMQQLD RCVESVAQET CPAYMCGDFA
0601: KSISEPSLNN AGVGFSPDSV LEVASVTCEN NASASHDVKL RGNPSYPAAL TGSDLHASDL CTSDFGKNHA SSSTDFEQQP KTVRGDETDD NTRSEEINQS
0701: HAIIGYVGEG KVQGLEKSNA VRKTKMLEKQ KERKKDGIKG NNIRDGSSTK ISSSEASKYR AFSDDPSSLV SSGPLKFSSC FEVVTSATQG ISMHEHGWVQ
0801: GPSVIGKEKT SALNNVKSPR CKKSDGLRGK KDMVRDPHVK QKSKKKNIAD DIFIDYGSST LPYHLTTDLA TSHTNEQGYH SPAIEFTLQN PAAISTELLG
0901: NAACLTDGAS VPQPKRAAWA CCDDCQKWRC IPSELADVIG ENRWTCKDND DKAFADCSIP QAKTNAEINA ELELSDASAD EADKDGSNSK ASRAPSWTNL
1001: RSNTYLHRNR RNQSIDESMV CNCKPPQDGR MGCRDGCLNR MLNIECAKRT CPCEEQCSNQ QFQRRNYAKI AWFHSGKKGY GLQLLEEVPE GRFLIEYVGE
1101: VLDITTYESR QRDYACKSKK HFYFMALDGG EVIDACTKGN LGRFINHSCS PNCRTEKWMV NGEVCIGIFA MRNIKKGEEL TFDYNYVRVS GAAPQKCFCG
1201: TAKCRGYIGG DISGSGISIQ HVAEAEHFEP MVTYKDAEEM LGNACSHGAN PSVAELQHET SIQQEDSNSC PPVTPDSEPH QTSPILFDDS ELENSWEMWS
1301: PQDAEDPTRT PVHVPRTIDS TLQQLPVHDT EPLELLPKAP NTMDGSNAPN VNQSAGSSDL GLNLVVPGFH AKKKNNLKDQ RDVKSSSCSI NNENTLGVEG
1401: RLNNLLDRDG GISRRKDSAN EYLKLLIFVI PAAHDNTTAE QENSVTAVEC DNARGTSKSA RDLSLILDAL LKTKSRSVLL DIINMNGLQM LHNILKQNRN
1501: TFLRRPIIRK LLKVLEFLAL KGILRAEKIN EEAPREKMER FRDSMLKLTR HNDKQVQTIA RQFCEKWIHP YMDGPVSTSK WYTESHYRRK RKSRWDYQPE
1601: SHYKMVGSQV RKVYGELGLQ SGLTRNKSQP VTGSSSTGTD DDVPPGFEPQ QGRYVAPGFC LPNSNISYGI PIARVEHLGT PEVEGGGNCG QKWKVAPGVP
1701: FIPFPQLQRG SPCPSTSTQM PRHDAMRQNN SSGYRGRGFD RGGRVQRNGR NGARSRYPYD HHQGRRFPSN HHRSERWQPW PQEQHDGGSG SRGRQ
0001: MDCKENGVGD ASGCNIDANS LASNLAMNTN EDFYEKLSSR GQNLDSVSSL EIPQTASSVN HTIEGQRKCF TEIEQMGYGN SNSQEDAGNT DDDLYVCYNA
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
Arabidopsis Description
EFShistone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) [Source:TAIR;Acc:AT1G77300]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.