Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G357600.1 | Wheat | plastid | 93.94 | 93.84 |
| TraesCS5D01G366700.1 | Wheat | plastid | 93.42 | 93.03 |
| HORVU5Hr1G088420.21 | Barley | plastid | 87.82 | 86.79 |
| Os09t0556700-01 | Rice | nucleus | 18.55 | 67.93 |
| KXG36166 | Sorghum | nucleus, plastid | 55.39 | 56.12 |
| Zm00001d006323_P069 | Maize | nucleus | 55.18 | 54.36 |
| VIT_04s0008g06180.t01 | Wine grape | nucleus | 17.88 | 30.45 |
| GSMUA_Achr7P17070_001 | Banana | nucleus | 25.54 | 24.32 |
| KRH15817 | Soybean | nucleus | 23.58 | 22.66 |
| KRH05241 | Soybean | nucleus | 23.58 | 22.39 |
| TraesCS7B01G354300.1 | Wheat | nucleus | 3.42 | 19.41 |
| TraesCS5B01G177800.2 | Wheat | nucleus | 3.58 | 19.06 |
| TraesCS3B01G265800.1 | Wheat | nucleus | 7.56 | 14.2 |
| TraesCS3B01G161800.3 | Wheat | plastid | 7.05 | 13.67 |
| TraesCS2B01G317900.1 | Wheat | nucleus | 3.47 | 12.67 |
| TraesCS6B01G249100.1 | Wheat | nucleus | 4.61 | 11.93 |
| TraesCS5B01G163000.1 | Wheat | nucleus, plastid | 6.68 | 11.88 |
| TraesCS7B01G028200.2 | Wheat | nucleus | 5.28 | 11.5 |
| TraesCS7B01G028500.2 | Wheat | nucleus | 4.56 | 10.97 |
| TraesCS5B01G046300.1 | Wheat | nucleus, plastid | 7.36 | 10.97 |
| TraesCS4B01G181400.3 | Wheat | nucleus, plastid | 4.97 | 10.79 |
| TraesCS2B01G015500.1 | Wheat | nucleus | 7.15 | 7.69 |
| TraesCS5A01G357700.1 | Wheat | mitochondrion | 0.1 | 2.5 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:2.170.270.10 | Gene3D:3.30.40.10 | MapMan:35.1 | ncoils:Coil | InterPro:EPHD |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR013083 |
| InterPro:IPR019787 | InterPro:IPR034732 | InterPro:Jas | PFAM:PF00856 | PFAM:PF13831 | PFAM:PF13832 |
| PFAM:PF16135 | PFscan:PS50016 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51805 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF454 | InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00249 | SMART:SM00317 | SUPFAM:SSF57903 |
| SUPFAM:SSF82199 | EnsemblPlantsGene:TraesCS5B01G360200 | EnsemblPlants:TraesCS5B01G360200.1 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | TIGR:cd15571 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:+:539919905..539931224
Molecular Weight (calculated)
211641.0 Da
IEP (calculated)
8.757
GRAVY (calculated)
-0.599
Length
1930 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPDRLLPTAT PWSQPARSGP SSNPLLAQTP PGSYYSYPHL SRAPDLNSLL HTPSASNASN AAAGAIDLAR AYTPLGCALP KYPRHGLSAG SGPDQSSLGA
0101: FFSNKSSSSN VQVNLPGEGS TSTIDGMPHG AVQFQDSSAA QMMQKLASKP APRHQPAPLT DRMHVSCLNV GGELFVGDAG PFGVLCSCHQ LRMSVAKFCE
0201: HAGGPAEKAG EIVLMENGMS IAHWFKYCVG VGSYVTDTKC DRPEWACIDP SPEGYRLKNL LARNTSMEKV GLFNGYGKGT GPINGTVYSN DLRKSTGPIS
0301: GTVYSNDLHN EGRGHTTVEK LGNKRDETYY RSADVHTSFA RNFALLQNSE TNLGLAKNHT VNTANLNQIS RLSGSPYITA STSAHHNGNH SSHNYADLLE
0401: NNSGASFRNP APRSPVVFSN DTRAGRYNFH NKILQDSLSS ASNTELKLGQ SSYHQSLTAL FPSAQSTLID FQRPQSHLPS VTQNHCPRQT VKVSKNIGEH
0501: NGPPVGRGTS EQSNGVANAI NRSEGGKVTD ASAKNSFISI FLSHLERNSE AIDDILKSSE HSLPRGLDGA YSSYHSKIAS RQVEPRANDN PSKLASTSIH
0601: TERISYDRAL SVALSGSSKV VPLANSQNSL IHSDCRSHLL PRQPNAGSSK VCDGAYSSYY SKSANRQVEP RANDNHSNSV STSIHTKMIS DGIALSVALS
0701: GYPSKVVPLA NSHEPLIHSD CQSHLLHRQP NAGSSKICAG VPCPANCRTG NHAGDVSHQA PCMYDKTANG HNTFECVDDS CTHRSSRVAK IICHCRNSCS
0801: SSREFLPSFG QHDQSALEKS IHRCCYRVQE DVSRLGFGAG HLCRTQFSND GAPIHKLGLH ELCTCSTFIP RPSLCSEDYI LQPSCHVCSP DGFHYRSSMG
0901: HATNSLTKCP LLDAPNNKKK SGPCWDGRCC CSVVPKCLTG CGFAKHCDDR IDQSGSSLQK CKHDMQLPIR CVGESEKLRC HCSSSAQTPL LKAVSNKMTN
1001: QLFAPISERL KNVSEESVAN ASSPYIAVKE KNGSCRGSGV CKERLNPGFS SGSSSAVVTK FPASPEFNNT SSCVDKYGVE HKKLMFDEGS RTEKSLSSSY
1101: DVPVNTGCEK SLNSSSTFHL DSSKVKRKHY QISDGITLKD NGKQQCSETR RKSRRLKCSE EQSVSDDCTR KITLQSENGD PQPQNEVSSY SCSVSKIKRK
1201: HTTMQRNKPV KRPHIHQEIL KGGEQSDGEG IMVGELNSSE EKKQVEDMST LVRTKHQQEG SRVFARKPPK YVSLNCILKE PKSENICSEV PLLDSSLIAT
1301: GITDDNRKFR KIAPLSLVLK KAKRCNAVKT PCNTENIHSC EEKSAVRPVG KYSFGNQNYS SKAEDGIQSS KKSRYSPNAL MLRPNIERDC KRPCIDIGEG
1401: QPIGPTDAET SQLSVQTSRK GFRNRRSSVS VNRIKRCEES ANRSARGPCD DKQNVVQACE VNVGRYKERL SSADSCCVCR IPYLEPCNKL MECSKCFVKA
1501: HQACYGVLKV PRGQWFCRPC KTQANAQDTV CVLCGYGGGA MTRALNAQKI LTSLRKGLRV TSQADKHVKH DPSYASRSTS LENISRVDKQ TLVDTAHEEN
1601: TISSSWTVNH SSSLLVPQML RWVHVVCGLW TPGTKCPNPT TMSAFDLSGA LPAKSDYACS MCDRAGGSFM MCRDVNCSVT FHAWCAHQRG LLQSDPEGEH
1701: NEYIGFYGRC LNHATNRKEC LRSNEWTCAR TEGFKGRKGE GCSGSNYKKP QVKSSECSVS QEQINAWLRI NGSKPCIRRQ SKGWKHLVVY KSGIHGLGLY
1801: TSEFIPRGSM VIEYVGEIVG QRVADKREIE YHSGKRQQYK SVCYFFKIDK EHIIDATRKG GIARFINHSC MPNCVAKIIS VKNEKKVVFF SERHIDPGEE
1901: ITYDYHFNQE DEGERIPCFC RSFSCRRYLN
0101: FFSNKSSSSN VQVNLPGEGS TSTIDGMPHG AVQFQDSSAA QMMQKLASKP APRHQPAPLT DRMHVSCLNV GGELFVGDAG PFGVLCSCHQ LRMSVAKFCE
0201: HAGGPAEKAG EIVLMENGMS IAHWFKYCVG VGSYVTDTKC DRPEWACIDP SPEGYRLKNL LARNTSMEKV GLFNGYGKGT GPINGTVYSN DLRKSTGPIS
0301: GTVYSNDLHN EGRGHTTVEK LGNKRDETYY RSADVHTSFA RNFALLQNSE TNLGLAKNHT VNTANLNQIS RLSGSPYITA STSAHHNGNH SSHNYADLLE
0401: NNSGASFRNP APRSPVVFSN DTRAGRYNFH NKILQDSLSS ASNTELKLGQ SSYHQSLTAL FPSAQSTLID FQRPQSHLPS VTQNHCPRQT VKVSKNIGEH
0501: NGPPVGRGTS EQSNGVANAI NRSEGGKVTD ASAKNSFISI FLSHLERNSE AIDDILKSSE HSLPRGLDGA YSSYHSKIAS RQVEPRANDN PSKLASTSIH
0601: TERISYDRAL SVALSGSSKV VPLANSQNSL IHSDCRSHLL PRQPNAGSSK VCDGAYSSYY SKSANRQVEP RANDNHSNSV STSIHTKMIS DGIALSVALS
0701: GYPSKVVPLA NSHEPLIHSD CQSHLLHRQP NAGSSKICAG VPCPANCRTG NHAGDVSHQA PCMYDKTANG HNTFECVDDS CTHRSSRVAK IICHCRNSCS
0801: SSREFLPSFG QHDQSALEKS IHRCCYRVQE DVSRLGFGAG HLCRTQFSND GAPIHKLGLH ELCTCSTFIP RPSLCSEDYI LQPSCHVCSP DGFHYRSSMG
0901: HATNSLTKCP LLDAPNNKKK SGPCWDGRCC CSVVPKCLTG CGFAKHCDDR IDQSGSSLQK CKHDMQLPIR CVGESEKLRC HCSSSAQTPL LKAVSNKMTN
1001: QLFAPISERL KNVSEESVAN ASSPYIAVKE KNGSCRGSGV CKERLNPGFS SGSSSAVVTK FPASPEFNNT SSCVDKYGVE HKKLMFDEGS RTEKSLSSSY
1101: DVPVNTGCEK SLNSSSTFHL DSSKVKRKHY QISDGITLKD NGKQQCSETR RKSRRLKCSE EQSVSDDCTR KITLQSENGD PQPQNEVSSY SCSVSKIKRK
1201: HTTMQRNKPV KRPHIHQEIL KGGEQSDGEG IMVGELNSSE EKKQVEDMST LVRTKHQQEG SRVFARKPPK YVSLNCILKE PKSENICSEV PLLDSSLIAT
1301: GITDDNRKFR KIAPLSLVLK KAKRCNAVKT PCNTENIHSC EEKSAVRPVG KYSFGNQNYS SKAEDGIQSS KKSRYSPNAL MLRPNIERDC KRPCIDIGEG
1401: QPIGPTDAET SQLSVQTSRK GFRNRRSSVS VNRIKRCEES ANRSARGPCD DKQNVVQACE VNVGRYKERL SSADSCCVCR IPYLEPCNKL MECSKCFVKA
1501: HQACYGVLKV PRGQWFCRPC KTQANAQDTV CVLCGYGGGA MTRALNAQKI LTSLRKGLRV TSQADKHVKH DPSYASRSTS LENISRVDKQ TLVDTAHEEN
1601: TISSSWTVNH SSSLLVPQML RWVHVVCGLW TPGTKCPNPT TMSAFDLSGA LPAKSDYACS MCDRAGGSFM MCRDVNCSVT FHAWCAHQRG LLQSDPEGEH
1701: NEYIGFYGRC LNHATNRKEC LRSNEWTCAR TEGFKGRKGE GCSGSNYKKP QVKSSECSVS QEQINAWLRI NGSKPCIRRQ SKGWKHLVVY KSGIHGLGLY
1801: TSEFIPRGSM VIEYVGEIVG QRVADKREIE YHSGKRQQYK SVCYFFKIDK EHIIDATRKG GIARFINHSC MPNCVAKIIS VKNEKKVVFF SERHIDPGEE
1901: ITYDYHFNQE DEGERIPCFC RSFSCRRYLN
0001: MACFSNETQI EIDVHDLVEA PIRYDSIESI YSIPSSALCC VNAVGSHSLM SKKVKAQKLP MIEQFEIEGS GVSASDDCCR SDDYKLRIQR PEIVRVYYRR
0101: RKRPLRECLL DQAVAVKTES VELDEIDCFE EKKRRKIGNC ELVKSGMESI GLRRCKENNA FSGNKQNGSS RRKGSSSKNQ DKATLASRSA KKWVRLSYDG
0201: VDPTSFIGLQ CKVFWPLDAL WYEGSIVGYS AERKRYTVKY RDGCDEDIVF DREMIKFLVS REEMELLHLK FCTSNVTVDG RDYDEMVVLA ATLDECQDFE
0301: PGDIVWAKLA GHAMWPAVIV DESIIGERKG LNNKVSGGGS LLVQFFGTHD FARIKVKQAI SFIKGLLSPS HLKCKQPRFE EGMQEAKMYL KAHRLPERMS
0401: QLQKGADSVD SDMANSTEEG NSGGDLLNDG EVWLRPTEHV DFRHIIGDLL IINLGKVVTD SQFFKDENHI WPEGYTAMRK FTSLTDHSAS ALYKMEVLRD
0501: AETKTHPLFI VTADSGEQFK GPTPSACWNK IYNRIKKVQN SDSPNILGEE LNGSGTDMFG LSNPEVIKLV QDLSKSRPSS HVSMCKNSLG RHQNQPTGYR
0601: PVRVDWKDLD KCNVCHMDEE YENNLFLQCD KCRMMVHAKC YGELEPCDGA LWLCNLCRPG APDMPPRCCL CPVVGGAMKP TTDGRWAHLA CAIWIPETCL
0701: SDVKKMEPID GVNKVSKDRW KLMCTICGVS YGACIQCSNN SCRVAYHPLC ARAAGLCVEL ENDMSVEGEE ADQCIRMLSF CKRHRQTSTA CLGSEDRIKS
0801: ATHKTSEYLP PPNPSGCART EPYNCFGRRG RKEPEALAAA SSKRLFVENQ PYVIGGYSRL EFSTYKSIHG SKVSQMNTPS NILSMAEKYR YMRETYRKRL
0901: AFGKSGIHGF GIFAKLPHRA GDMMIEYTGE LVRPSIADKR EQLIYNSMVG AGTYMFRIDD ERVIDATRTG SIAHLINHSC VPNCYSRVIT VNGDEHIIIF
1001: AKRHIPKWEE LTYDYRFFSI GERLSCSCGF PGCRGVVNDT EAEEQHAKIC VPRCDLIDWT AE
0101: RKRPLRECLL DQAVAVKTES VELDEIDCFE EKKRRKIGNC ELVKSGMESI GLRRCKENNA FSGNKQNGSS RRKGSSSKNQ DKATLASRSA KKWVRLSYDG
0201: VDPTSFIGLQ CKVFWPLDAL WYEGSIVGYS AERKRYTVKY RDGCDEDIVF DREMIKFLVS REEMELLHLK FCTSNVTVDG RDYDEMVVLA ATLDECQDFE
0301: PGDIVWAKLA GHAMWPAVIV DESIIGERKG LNNKVSGGGS LLVQFFGTHD FARIKVKQAI SFIKGLLSPS HLKCKQPRFE EGMQEAKMYL KAHRLPERMS
0401: QLQKGADSVD SDMANSTEEG NSGGDLLNDG EVWLRPTEHV DFRHIIGDLL IINLGKVVTD SQFFKDENHI WPEGYTAMRK FTSLTDHSAS ALYKMEVLRD
0501: AETKTHPLFI VTADSGEQFK GPTPSACWNK IYNRIKKVQN SDSPNILGEE LNGSGTDMFG LSNPEVIKLV QDLSKSRPSS HVSMCKNSLG RHQNQPTGYR
0601: PVRVDWKDLD KCNVCHMDEE YENNLFLQCD KCRMMVHAKC YGELEPCDGA LWLCNLCRPG APDMPPRCCL CPVVGGAMKP TTDGRWAHLA CAIWIPETCL
0701: SDVKKMEPID GVNKVSKDRW KLMCTICGVS YGACIQCSNN SCRVAYHPLC ARAAGLCVEL ENDMSVEGEE ADQCIRMLSF CKRHRQTSTA CLGSEDRIKS
0801: ATHKTSEYLP PPNPSGCART EPYNCFGRRG RKEPEALAAA SSKRLFVENQ PYVIGGYSRL EFSTYKSIHG SKVSQMNTPS NILSMAEKYR YMRETYRKRL
0901: AFGKSGIHGF GIFAKLPHRA GDMMIEYTGE LVRPSIADKR EQLIYNSMVG AGTYMFRIDD ERVIDATRTG SIAHLINHSC VPNCYSRVIT VNGDEHIIIF
1001: AKRHIPKWEE LTYDYRFFSI GERLSCSCGF PGCRGVVNDT EAEEQHAKIC VPRCDLIDWT AE
Arabidopsis Description
ATX1Histone-lysine N-methyltransferase ATX1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.