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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G366700.1 Wheat plastid 87.86 88.54
TraesCS5A01G357600.1 Wheat plastid 87.35 88.3
TraesCS5B01G360200.1 Wheat plastid 86.79 87.82
Os09t0556700-01 Rice nucleus 18.54 68.69
KXG36166 Sorghum nucleus, plastid 54.58 55.96
Zm00001d006323_P069 Maize nucleus 54.22 54.06
VIT_04s0008g06180.t01 Wine grape nucleus 17.46 30.1
HORVU3Hr1G083480.1 Barley nucleus, peroxisome 3.48 28.69
GSMUA_Achr7P17070_001 Banana nucleus 25.76 24.82
KRH15817 Soybean nucleus 23.71 23.06
KRH05241 Soybean nucleus 23.86 22.93
HORVU5Hr1G054880.2 Barley mitochondrion 3.58 18.28
HORVU7Hr1G103420.7 Barley nucleus 3.58 16.95
HORVU3Hr1G059080.11 Barley cytosol, mitochondrion, nucleus, plastid 7.63 14.54
HORVU3Hr1G027580.1 Barley plastid 6.86 13.44
HORVU2Hr1G074910.11 Barley cytosol, nucleus 3.28 12.7
HORVU7Hr1G026910.29 Barley cytosol, nucleus 4.81 11.94
HORVU5Hr1G051100.8 Barley nucleus 6.91 11.75
HORVU7Hr1G026840.1 Barley cytosol, mitochondrion, nucleus 5.33 11.32
HORVU4Hr1G053740.8 Barley cytosol, mitochondrion, nucleus 5.07 10.86
HORVU0Hr1G020960.1 Barley nucleus 1.84 8.41
HORVU2Hr1G000940.11 Barley nucleus 7.12 7.67
TraesCS5A01G357700.1 Wheat mitochondrion 0.1 2.5
Protein Annotations
KEGG:00310+2.1.1.43Gene3D:2.170.270.10Gene3D:3.30.40.10MapMan:35.1UniProt:A0A287S6H0ncoils:Coil
InterPro:EPHDGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740GO:GO:0032259GO:GO:0046872EnsemblPlantsGene:HORVU5Hr1G088420EnsemblPlants:HORVU5Hr1G088420.21InterPro:IPR001214
InterPro:IPR003616InterPro:IPR013083InterPro:IPR019787InterPro:IPR034732InterPro:JasPFAM:PF00856
PFAM:PF13831PFAM:PF13832PFAM:PF16135PFscan:PS50016PFscan:PS50280PFscan:PS50868
PFscan:PS51805PANTHER:PTHR22884PANTHER:PTHR22884:SF454InterPro:Post-SET_domInterPro:SET_domSMART:SM00249
SMART:SM00317SUPFAM:SSF57903SUPFAM:SSF82199UniParc:UPI000B47A732InterPro:Znf_FYVE_PHDInterPro:Znf_PHD
InterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg:::
Description
No Description!
Coordinates
chrchr5H:-:581763305..581775201
Molecular Weight (calculated)
213946.0 Da
IEP (calculated)
8.665
GRAVY (calculated)
-0.633
Length
1953 amino acids
Sequence
(BLAST)
0001: ASRPGQSPPG PAAVPERFAL NTAAMPDRLL PNPSPWSQPA RSGTGSNPLL AQTPPGSYYS YPHLSRAPDP KSLLHTPSMS NAAAGAVDLA RAYTPLGAEL
0101: AKYPRYGLSA GGGAEQSSLG ALFLNKSSSN AQVNLPGEGS TSTIDGMSHG AMQFQDSSAA QMMQRLPSKP TPCHQPAPLT DRIRVSCLRT GGELFVGDAG
0201: PFGVLCSCHQ LRMSVAKFCE HAGGPAEKAG EIVLMENGMS IAHWFKYCVG VGSYVTDTKC DRPEWACIDS SPEGHRLKNL LARNTSMEKV GLFNGYGKST
0301: GPINGTVYSN DLRKSTGPMS GTVYSNDLHN KGRGSTTVEK LGNKRDETYY RSADVHASFA RNFTLLQNSE TNLGLAKDHT VNAANLNQIR RPSGSPYFTA
0401: SMGAHHNGNH SSHKYADLVE NNFDASFCHP APRSAGVFSN DTRSGRYIFP NKILQDSLSS ASNTELKLGQ SSYHQSLTAL FPSAQSTLID FQRPRSHLPS
0501: VTQNHCPRQT VKVSKNIGEH TEPPFGRGTS EQSNGVANAI NRSEGGKVTD DAAKNSFISI FLSHLERNSE AIDDILKSSE HSLPKGLDGA YSSYLSKIAS
0601: RQVEPRANEN YSKLASTSIH TNRISDDRAL SVALTGSSEV APLANNQDAL IHSDCRPHLL HRQTNAGGSK VCGDAYSSYH SKIANRQVEP RTNGNHSNVV
0701: STSIHMEKVS DGRAPSKYAS KVVHLANSHE PIIHRDCQSH LLHSQPDAGS SKICAGVPCP ANCRNGNHAG DISHKVAHSE TAAPYLHDKT AKGHNTFECV
0801: DVPCTHSSSR VAKIICHCRN SCSSSRECLP SFGQYDQSTL GKSIHRCCYR VQEDVSRLGF RAGHLCRTQF SNDGAPVHKL GLHELCTCST FIPRSSLCSG
0901: DYILQPSCHE CSPDRYHYRS STGHGTNSLT KCPPLDAPNK KESGPCWDGR CCCSVVPKCL TGCGFAKHCD DGIDQSDSSL QKCKHDVQLP ARCCTLGDSE
1001: KLRCSSNAQT PFLKAVSNKM TNQLFAPISE RLKNVSEESV AASSPYIAVT EKKGTCRGSG VCKERPKSGF SSGSSSAVVT KFSAPPEFNN TPPSVDKYGV
1101: ERNKLMIDEG SRTEKCSSSS YVPISTGCEK SLNGSSTFHL DTSKVKRKYY QISDGSTLKH NGKQPHSETQ IKSRRLSCSE EHSESDDCTR KNTLQSSENG
1201: EPQPQNEDSS YSCTVSKIKR KHTTVQRNKP VKRPHIHQEI LEGDEQSDDE GIMVGESNSS DEKKQVEDMG TLIRAKHQQE GRRMFVRKPP KYVSLNCILN
1301: EPNSENVCSE VPLLHSSLIA TGITDDNRKS PKIAPLSLVL KKAKRCNAVK TPGNTENIHS CEEKSAVRPV GKYSFGNRDY SSKAEDGIHS SKKSRYSPNA
1401: LRLRPHIEPD CKRPCIDLGE GEPIGPTDVE TSQLLVQTSR TGFKNRKSSL SLNRIRRCEE SANGSARGPC GDKQNVVQAL NVGRYKERLS LADSCCVCRI
1501: PYLEPCNQLM ECSKCFVKAH QACYGVLKVP RGQWFCRPCK TKANAQDTVC VLCGYGGGAM TRALNAQKIL TSLRKGLRVI SRADKHVKHD PSYASRSTSL
1601: ESISRVDKQR SVDNPHEENT VSSSWTANHS SSLLVPQTSR WVHVVCGLWT PGTKCPNPTT MSAFDLSGAL AAKSDYACSM CDRAGGSFMM CRDVNCSVTF
1701: HAWCAHQRGL LQSDPEGEHN EYIGFYGRCL NHATNRVNPE KECLRSNEWT CARTEGFKGR RGEGSSGSNY KKPQVKSSEC SVSQEQINAW LRINGSKPCI
1801: RRQSKGWKHL VVYKSGIHGL GLYTSEFIPR GSMVIEYVGE IVGQRVADKR EIDYHSGKRQ QYKSVCYFFK IDKEHIIDAT RKGGIARFIN HSCMPNCVAK
1901: IISVKNEKKV VFFSERHIDP GEEITYDYHF NQEDEGERIP CFCRSFSCRR YLN
Best Arabidopsis Sequence Match ( AT1G05830.1 )
(BLAST)
0001: MISMSCVPKE EEGEDTQIKT ELHDHAADNP VRYASLESVY SVSSSSSSLC CKTAAGSHKK VNALKLPMSD SFELQPHRRP EIVHVYCRRK RRRRRRRESF
0101: LELAILQNEG VERDDRIVKI ESAELDDEKE EENKKKKQKK RRIGNGELMK LGVDSTTLSV SATPPLRGCR IKAVCSGNKQ DGSSRSKRNT VKNQEKVVTA
0201: SATAKKWVRL SYDGVDPKHF IGLQCKVFWP LDAVWYPGSI VGYNVETKHH IVKYGDGDGE ELALRREKIK FLISRDDMEL LNMKFGTNDV VVDGQDYDEL
0301: VILAASFEEC QDFEPRDIIW AKLTGHAMWP AIIVDESVIV KRKGLNNKIS GGRSVLVQFF GTHDFARIQV KQAVSFLKGL LSRSPLKCKQ PRFEEAMEEA
0401: KMYLKEYKLP GRMDQLQKVA DTDCSERINS GEEDSSNSGD DYTKDGEVWL RPTELGDCLH RIGDLQIINL GRIVTDSEFF KDSKHTWPEG YTATRKFISL
0501: KDPNASAMYK MEVLRDAESK TRPVFRVTTN SGEQFKGDTP SACWNKIYNR IKKIQIASDN PDVLGEGLHE SGTDMFGFSN PEVDKLIQGL LQSRPPSKVS
0601: QRKYSSGKYQ DHPTGYRPVR VEWKDLDKCN VCHMDEEYEN NLFLQCDKCR MMVHTRCYGQ LEPHNGILWL CNLCRPVALD IPPRCCLCPV VGGAMKPTTD
0701: GRWAHLACAI WIPETCLLDV KKMEPIDGVK KVSKDRWKLL CSICGVSYGA CIQCSNNTCR VAYHPLCARA AGLCVELADE DRLFLLSMDD DEADQCIRLL
0801: SFCKRHRQTS NYHLETEYMI KPAHNIAEYL PPPNPSGCAR TEPYNYLGRR GRKEPEALAG ASSKRLFVEN QPYIVGGYSR HEFSTYERIY GSKMSQITTP
0901: SNILSMAEKY TFMKETYRKR LAFGKSGIHG FGIFAKLPHR AGDMVIEYTG ELVRPPIADK REHLIYNSMV GAGTYMFRID NERVIDATRT GSIAHLINHS
1001: CEPNCYSRVI SVNGDEHIII FAKRDVAKWE ELTYDYRFFS IDERLACYCG FPRCRGVVND TEAEERQANI HASRCELKEW TES
Arabidopsis Description
ATX2Histone-lysine N-methyltransferase ATX2 [Source:UniProtKB/Swiss-Prot;Acc:P0CB22]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.