Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G163000.1 | Wheat | nucleus, plastid | 91.38 | 96.69 |
| TraesCS5A01G165200.1 | Wheat | plastid | 90.6 | 95.86 |
| TraesCS5D01G170100.5 | Wheat | nucleus, plastid | 92.86 | 94.42 |
| Os09t0134500-02 | Rice | nucleus | 73.89 | 83.07 |
| EER96448 | Sorghum | nucleus | 71.19 | 80.2 |
| Zm00001d019907_P003 | Maize | nucleus | 70.84 | 77.45 |
| GSMUA_Achr1P18360_001 | Banana | nucleus | 57.88 | 64.75 |
| Bra021721.1-P | Field mustard | nucleus | 43.26 | 51.66 |
| CDY19078 | Canola | nucleus | 45.69 | 50.97 |
| CDY15398 | Canola | nucleus | 45.69 | 50.77 |
| VIT_05s0124g00250.t01 | Wine grape | nucleus | 47.35 | 50.18 |
| KRH01524 | Soybean | nucleus | 47.52 | 50.18 |
| KRH45215 | Soybean | nucleus | 47.35 | 50.0 |
| AT2G31650.1 | Thale cress | nucleus | 46.13 | 49.91 |
| CDY06182 | Canola | nucleus | 46.04 | 49.81 |
| AT1G05830.3 | Thale cress | nucleus | 46.91 | 49.77 |
| CDY10007 | Canola | nucleus | 45.43 | 46.9 |
| HORVU3Hr1G083480.1 | Barley | nucleus, peroxisome | 4.44 | 21.52 |
| HORVU3Hr1G059080.11 | Barley | cytosol, mitochondrion, nucleus, plastid | 18.97 | 21.27 |
| HORVU3Hr1G027580.1 | Barley | plastid | 17.41 | 20.06 |
| HORVU5Hr1G054880.2 | Barley | mitochondrion | 5.4 | 16.19 |
| HORVU7Hr1G103420.7 | Barley | nucleus | 5.57 | 15.5 |
| HORVU2Hr1G074910.11 | Barley | cytosol, nucleus | 4.96 | 11.31 |
| HORVU7Hr1G026910.29 | Barley | cytosol, nucleus | 7.05 | 10.29 |
| HORVU7Hr1G026840.1 | Barley | cytosol, mitochondrion, nucleus | 7.83 | 9.79 |
| HORVU4Hr1G053740.8 | Barley | cytosol, mitochondrion, nucleus | 7.57 | 9.54 |
| HORVU0Hr1G020960.1 | Barley | nucleus | 2.7 | 7.24 |
| HORVU5Hr1G088420.21 | Barley | plastid | 11.75 | 6.91 |
| HORVU2Hr1G000940.11 | Barley | nucleus | 8.18 | 5.19 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.5 | Gene3D:2.170.270.10 | Gene3D:2.30.30.140 | Gene3D:3.30.160.360 | Gene3D:3.30.40.10 |
| UniProt:A0A287R716 | InterPro:EPHD | InterPro:FYrich_C | InterPro:FYrich_N | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016571 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 |
| GO:GO:0035556 | GO:GO:0042054 | GO:GO:0046872 | GO:GO:0048578 | EnsemblPlantsGene:HORVU5Hr1G051100 | EnsemblPlants:HORVU5Hr1G051100.8 |
| InterPro:IPR000313 | InterPro:IPR001214 | InterPro:IPR002219 | InterPro:IPR002999 | InterPro:IPR003616 | InterPro:IPR003888 |
| InterPro:IPR003889 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:IPR034732 | InterPro:PE/DAG-bd | PFAM:PF00855 |
| PFAM:PF00856 | PFAM:PF05964 | PFAM:PF05965 | PFAM:PF13831 | PFAM:PF13832 | ScanProsite:PS01359 |
| PFscan:PS50016 | PFscan:PS50081 | PFscan:PS50280 | PFscan:PS50812 | PFscan:PS50868 | PFscan:PS51542 |
| PFscan:PS51543 | PFscan:PS51805 | PANTHER:PTHR13793 | PANTHER:PTHR13793:SF126 | InterPro:PWWP_dom | InterPro:Post-SET_dom |
| InterPro:SET_dom | SMART:SM00249 | SMART:SM00293 | SMART:SM00317 | SMART:SM00333 | SMART:SM00508 |
| SMART:SM00541 | SMART:SM00542 | SUPFAM:SSF57903 | SUPFAM:SSF63748 | SUPFAM:SSF82199 | InterPro:Tudor |
| UniParc:UPI000B46E66E | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:399167042..399197296
Molecular Weight (calculated)
129033.0 Da
IEP (calculated)
7.623
GRAVY (calculated)
-0.565
Length
1149 amino acids
Sequence
(BLAST)
(BLAST)
0001: EEKKTPWYDG EKTSKRAMPH WQWQRETTAA QAQQPASGAE EGGRPWRKEI GKSSSSSAVR EGERGAEAML APALSPPKRF RDPPNGSLPP SLNPPAIPKS
0101: PKALGLAALD ERHPKPYPPA MVIAVEGSFV HQDEGEDGDH PMRYLPLGRV YSSTAPCPPP KKPRSSASAA AGGKPPVIVY YRRRRKKPRL EEPRPSSPAT
0201: APRQPEEGAL GRGSRRKRPL KHELLSLGSA PPALGSDGDG EELLRRRQPR RRGGLEKEST SAPRRRRRRS SQLEAASPSE RRWVELEIQG VDPQAFVGLV
0301: CKVFWPLDDD WYKGSITAYT ELTKKHSVKY DDGEAEDLTL ANERIQFSIS SEEMKCLNLK FGTSNLDKQG YDELLALAVS FHDYQGLDPD DLVWAKITGH
0401: AMWPAVIVDE SNVPSSRALK PIRLDQSILV QFFGTHDFAR IKSKQAVPFL SGLLSSLHLK CKQTRFSRGL EEAKEFLLTQ QLPENMLQLR KSIENDGSDV
0501: NGQDDVIGSC DNLSEERAED NGEDAEMTQI ELGNLRVSNL GRIVSDSDHF HNKMHIWPEG YTAFRKFTSV NDPHLVTSYK MEVLRNSDIK ARPLFRVISE
0601: DGLQIDGSTP NACWKEIYCR IKAKQCNVAS ELEGNVCQRS GSDMFGFSNP QIRQLIQELP NARSCLKYFE NGGETLRGYR AVHVNWKDLD FCSVCDMDEE
0701: YEDNLFLQCD KCRMMVHARC YGELEPLNGV LWLCNLCRPG APRVSPRCCL CPVTGGAMKP TTDGRWAHLA CAIWIPETCL KDVKRMEPID GLSKINKDRW
0801: KLLCSICTVA YGVCIQCSHP TCRVAYHPLC ARAADLCVEL EDDDKIHLIL LEEDEDPCIR LLSYCKKHRQ PSTERPSLES DLGNPAQLVQ TDAASSSGCA
0901: RTEPYNFHRR RGQQQPQVTA TASVKRLYVE NMPYIVSGYC QNKVGCDTSC EPIQSVALLD AASQEASVNV SSMAEKYKSM KATFRKRLAF GKSRIHGFGV
1001: FAKVGHKAGD MMIEYIGELV RPPISDLRER RIYNSLVGAG TYMFRIDDER VIDATRAGSI AHLINHSCEP NCYSRVISVL GDEHIIIFAK RDIDPWEELT
1101: YDYRFVSNEQ RLPCYCGFPK CRGVVNDVEA EVQSTKIRVT RSELFQQKD
0101: PKALGLAALD ERHPKPYPPA MVIAVEGSFV HQDEGEDGDH PMRYLPLGRV YSSTAPCPPP KKPRSSASAA AGGKPPVIVY YRRRRKKPRL EEPRPSSPAT
0201: APRQPEEGAL GRGSRRKRPL KHELLSLGSA PPALGSDGDG EELLRRRQPR RRGGLEKEST SAPRRRRRRS SQLEAASPSE RRWVELEIQG VDPQAFVGLV
0301: CKVFWPLDDD WYKGSITAYT ELTKKHSVKY DDGEAEDLTL ANERIQFSIS SEEMKCLNLK FGTSNLDKQG YDELLALAVS FHDYQGLDPD DLVWAKITGH
0401: AMWPAVIVDE SNVPSSRALK PIRLDQSILV QFFGTHDFAR IKSKQAVPFL SGLLSSLHLK CKQTRFSRGL EEAKEFLLTQ QLPENMLQLR KSIENDGSDV
0501: NGQDDVIGSC DNLSEERAED NGEDAEMTQI ELGNLRVSNL GRIVSDSDHF HNKMHIWPEG YTAFRKFTSV NDPHLVTSYK MEVLRNSDIK ARPLFRVISE
0601: DGLQIDGSTP NACWKEIYCR IKAKQCNVAS ELEGNVCQRS GSDMFGFSNP QIRQLIQELP NARSCLKYFE NGGETLRGYR AVHVNWKDLD FCSVCDMDEE
0701: YEDNLFLQCD KCRMMVHARC YGELEPLNGV LWLCNLCRPG APRVSPRCCL CPVTGGAMKP TTDGRWAHLA CAIWIPETCL KDVKRMEPID GLSKINKDRW
0801: KLLCSICTVA YGVCIQCSHP TCRVAYHPLC ARAADLCVEL EDDDKIHLIL LEEDEDPCIR LLSYCKKHRQ PSTERPSLES DLGNPAQLVQ TDAASSSGCA
0901: RTEPYNFHRR RGQQQPQVTA TASVKRLYVE NMPYIVSGYC QNKVGCDTSC EPIQSVALLD AASQEASVNV SSMAEKYKSM KATFRKRLAF GKSRIHGFGV
1001: FAKVGHKAGD MMIEYIGELV RPPISDLRER RIYNSLVGAG TYMFRIDDER VIDATRAGSI AHLINHSCEP NCYSRVISVL GDEHIIIFAK RDIDPWEELT
1101: YDYRFVSNEQ RLPCYCGFPK CRGVVNDVEA EVQSTKIRVT RSELFQQKD
0001: MACFSNETQI EIDVHDLVEA PIRYDSIESI YSIPSSALCC VNAVGSHSLM SKKVKAQKLP MIEQFEIEGS GVSASDDCCR SDDYKLRIQR PEIVRVYYRR
0101: RKRPLRECLL DQAVAVKTES VELDEIDCFE EKKRRKIGNC ELVKSGMESI GLRRCKENNA FSGNKQNGSS RRKGSSSKNQ DKATLASRSA KKWVRLSYDG
0201: VDPTSFIGLQ CKVFWPLDAL WYEGSIVGYS AERKRYTVKY RDGCDEDIVF DREMIKFLVS REEMELLHLK FCTSNVTVDG RDYDEMVVLA ATLDECQDFE
0301: PGDIVWAKLA GHAMWPAVIV DESIIGERKG LNNKVSGGGS LLVQFFGTHD FARIKVKQAI SFIKGLLSPS HLKCKQPRFE EGMQEAKMYL KAHRLPERMS
0401: QLQKGADSVD SDMANSTEEG NSGGDLLNDG EVWLRPTEHV DFRHIIGDLL IINLGKVVTD SQFFKDENHI WPEGYTAMRK FTSLTDHSAS ALYKMEVLRD
0501: AETKTHPLFI VTADSGEQFK GPTPSACWNK IYNRIKKVQN SDSPNILGEE LNGSGTDMFG LSNPEVIKLV QDLSKSRPSS HVSMCKNSLG RHQNQPTGYR
0601: PVRVDWKDLD KCNVCHMDEE YENNLFLQCD KCRMMVHAKC YGELEPCDGA LWLCNLCRPG APDMPPRCCL CPVVGGAMKP TTDGRWAHLA CAIWIPETCL
0701: SDVKKMEPID GVNKVSKDRW KLMCTICGVS YGACIQCSNN SCRVAYHPLC ARAAGLCVEL ENDMSVEGEE ADQCIRMLSF CKRHRQTSTA CLGSEDRIKS
0801: ATHKTSEYLP PPNPSGCART EPYNCFGRRG RKEPEALAAA SSKRLFVENQ PYVIGGYSRL EFSTYKSIHG SKVSQMNTPS NILSMAEKYR YMRETYRKRL
0901: AFGKSGIHGF GIFAKLPHRA GDMMIEYTGE LVRPSIADKR EQLIYNSMVG AGTYMFRIDD ERVIDATRTG SIAHLINHSC VPNCYSRVIT VNGDEHIIIF
1001: AKRHIPKWEE LTYDYRFFSI GERLSCSCGF PGCRGVVNDT EAEEQHAKIC VPRCDLIDWT AE
0101: RKRPLRECLL DQAVAVKTES VELDEIDCFE EKKRRKIGNC ELVKSGMESI GLRRCKENNA FSGNKQNGSS RRKGSSSKNQ DKATLASRSA KKWVRLSYDG
0201: VDPTSFIGLQ CKVFWPLDAL WYEGSIVGYS AERKRYTVKY RDGCDEDIVF DREMIKFLVS REEMELLHLK FCTSNVTVDG RDYDEMVVLA ATLDECQDFE
0301: PGDIVWAKLA GHAMWPAVIV DESIIGERKG LNNKVSGGGS LLVQFFGTHD FARIKVKQAI SFIKGLLSPS HLKCKQPRFE EGMQEAKMYL KAHRLPERMS
0401: QLQKGADSVD SDMANSTEEG NSGGDLLNDG EVWLRPTEHV DFRHIIGDLL IINLGKVVTD SQFFKDENHI WPEGYTAMRK FTSLTDHSAS ALYKMEVLRD
0501: AETKTHPLFI VTADSGEQFK GPTPSACWNK IYNRIKKVQN SDSPNILGEE LNGSGTDMFG LSNPEVIKLV QDLSKSRPSS HVSMCKNSLG RHQNQPTGYR
0601: PVRVDWKDLD KCNVCHMDEE YENNLFLQCD KCRMMVHAKC YGELEPCDGA LWLCNLCRPG APDMPPRCCL CPVVGGAMKP TTDGRWAHLA CAIWIPETCL
0701: SDVKKMEPID GVNKVSKDRW KLMCTICGVS YGACIQCSNN SCRVAYHPLC ARAAGLCVEL ENDMSVEGEE ADQCIRMLSF CKRHRQTSTA CLGSEDRIKS
0801: ATHKTSEYLP PPNPSGCART EPYNCFGRRG RKEPEALAAA SSKRLFVENQ PYVIGGYSRL EFSTYKSIHG SKVSQMNTPS NILSMAEKYR YMRETYRKRL
0901: AFGKSGIHGF GIFAKLPHRA GDMMIEYTGE LVRPSIADKR EQLIYNSMVG AGTYMFRIDD ERVIDATRTG SIAHLINHSC VPNCYSRVIT VNGDEHIIIF
1001: AKRHIPKWEE LTYDYRFFSI GERLSCSCGF PGCRGVVNDT EAEEQHAKIC VPRCDLIDWT AE
Arabidopsis Description
ATX1Histone-lysine N-methyltransferase ATX1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.