Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G005000.1 | Wheat | nucleus | 96.51 | 97.68 |
| TraesCS2B01G015500.1 | Wheat | nucleus | 88.16 | 89.97 |
| HORVU2Hr1G000940.11 | Barley | nucleus | 86.35 | 87.31 |
| OQU85110 | Sorghum | nucleus | 49.62 | 47.74 |
| Zm00001d016804_P002 | Maize | nucleus | 43.5 | 44.4 |
| VIT_18s0001g01700.t01 | Wine grape | nucleus | 19.76 | 34.74 |
| Solyc04g057880.2.1 | Tomato | nucleus | 22.6 | 29.66 |
| TraesCS7D01G443000.1 | Wheat | nucleus | 5.46 | 29.59 |
| TraesCS5D01G184500.1 | Wheat | nucleus | 5.51 | 28.45 |
| Solyc06g059960.2.1 | Tomato | nucleus | 23.42 | 25.77 |
| GSMUA_Achr9P08570_001 | Banana | nucleus | 28.38 | 25.67 |
| Bra015678.1-P | Field mustard | nucleus | 23.03 | 25.47 |
| CDX87527 | Canola | nucleus | 23.03 | 25.47 |
| CDX88357 | Canola | nucleus | 22.93 | 25.35 |
| TraesCS2D01G300800.1 | Wheat | nucleus | 6.6 | 24.1 |
| KRH53306 | Soybean | nucleus | 26.2 | 23.53 |
| KRH64610 | Soybean | nucleus | 26.75 | 23.51 |
| AT1G77300.1 | Thale cress | nucleus | 23.03 | 23.38 |
| TraesCS3D01G369900.1 | Wheat | plastid | 5.29 | 21.51 |
| TraesCS6D01G202600.1 | Wheat | nucleus | 7.37 | 17.69 |
| TraesCS7D01G318100.1 | Wheat | nucleus | 3.6 | 15.53 |
| TraesCS7D01G127100.2 | Wheat | nucleus | 5.4 | 11.16 |
| TraesCS4D01G184600.3 | Wheat | nucleus, plastid | 5.02 | 10.34 |
| TraesCS7D01G127400.1 | Wheat | nucleus | 4.2 | 9.6 |
| TraesCS3D01G144300.2 | Wheat | plastid | 4.91 | 9.05 |
| TraesCS3D01G237600.2 | Wheat | nucleus | 4.91 | 8.81 |
| TraesCS5D01G170100.5 | Wheat | nucleus, plastid | 5.24 | 8.5 |
| TraesCS5D01G051200.1 | Wheat | nucleus, plastid | 5.68 | 8.04 |
| TraesCS5D01G366700.1 | Wheat | plastid | 7.31 | 6.91 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | Gene3D:3.30.40.100 | InterPro:AWS_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | InterPro:IPR001214 |
| InterPro:IPR003616 | InterPro:IPR006560 | InterPro:IPR011124 | PFAM:PF00856 | PFAM:PF07496 | PFscan:PS50280 |
| PFscan:PS50868 | PFscan:PS51050 | PFscan:PS51215 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF466 | InterPro:Post-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 | EnsemblPlantsGene:TraesCS2D01G007100 |
| EnsemblPlants:TraesCS2D01G007100.1 | InterPro:Znf_CW | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:3774420..3789494
Molecular Weight (calculated)
201753.0 Da
IEP (calculated)
6.930
GRAVY (calculated)
-0.720
Length
1832 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVDKAAETSQ REVAAEGVVL WDEALVKTSP EDLQMRCKEL RCYNDITVMC LKKDVNCDLE KDGLWPKIEA EVSTPAHQDS VPLNFGCNLA VCLDGKAGEI
0101: GEVSEHRTGM ERAACGSQGG GMLSFDRGFW KGAVGDKNQF PRMEGCHENG GLSDLGNHDT DKFPQGADAL SLIDDNHELG RDCFLANIDE EVSFPVDEAS
0201: IPSFYQKSYM DVFVEDSKSC IEKLTQDSLE GDMLSCERDA RFRTEASGDE NQHHRMAVSK GQVSSICKDA NSPSLNACGL FPEIEVLRQQ ADKEYKVFEL
0301: PPEIYLARSS YNPPCLDGLC RSGKESSAVC LGHQDSSGVK SRCPDHLVQE LNAYNSSIDK PCSANFVETA NDEESQNKIS ESLNASKRRN PRRAASSRNR
0401: APAEHDHQIN KGSSSTCKSK KVESSCSLVE STLIKFPSKT TKVRSGINRP VNSTAWGSLE KLVDGFGQNC EPSTSNSHLI SLENGGRSNK RSGKKEQPIV
0501: RKARSSRCPK NKFPAFSVTR YAPDELNGEP TFSVMDGAYG SAEGYIGNFP KLAPRAFLNV SDDAHRSVQH MSIQTDMQQL DRCLDSVAQE TCPAYMCGEF
0601: AKSISEPSLN NGGVGFSPDS VLEVASVTCE NNTSASHDVK LRGNPSYPAV LTESDLHASD LSIPDFGKNH ASSSTDFEQQ PKTVRGDENT RSEEINQSHA
0701: IIGYVGEGKV QGLEKSNAVR KTKMLEKQKG RKKDGIKGNN IRDGSSTKIS SSEASKYRVF SDDPSSLVSS GPLKFSSCFE VVTSATQGIS MHEHGWVQGP
0801: SVIGKEKTSA LNNVKSPRCK KSGGLRGKKD MVRDPHVKQE SKKKNIADAI FIDSGSSTLP YQLATDLATS HTNEHGYRSP AIEYTFQNPA AISTELPGNA
0901: AGSTGGVSVP QPKRAAWACC DDCQKWRCIP SELADVIGEN RWTCKDNDDK AFADCSIPQA KTNAEINAEL ELSDASADEA DKDGSNSKAS RAPSWTNLRS
1001: NTYLHRNRRN QSIDESMVCN CKPPQEGRMG CRDGCLNRML NIECAKRTCP CEEQCSNQQF QRRNYAKIAW FHSGKKGYGL KLQEEVSEGR FLIEYVGEVL
1101: DITTYESRQR DYASKGKKHF YFMALDGGEV IDACTKGNLG RFINHSCSPN CRTEKWMVNG EVCIGIFAMR NIKKGEELTF DYNYVRVSGA APQKCFCGTA
1201: KCRGYIGGDI SGSGISTQHV AEAEYFEPTV TYKDAEEMLG NACSHGANPI VVELEHETSI QQEDSNNCIP VTPDSEPHQT SPVTPDSEPH QTSPILFENS
1301: ELENSWEMWS PQDAEDPTRT PVHVPRTIDS TLQQLPVYDT QPLEFLPKAP NTMDGSEAPN VMNQSARSSD LGQNLVVPGF HAKKKNNLKD QRDVKSSSCS
1401: TDNENTLGVE ARLNNLLDRD GGISRRKDST NGYLRLLLFV TAAARDNAAA AAARDNAAAS AARDNAAAAA AYDATAMEHE NAATPAERDN AGGTSKSARD
1501: LSLILDALLK TKSRSVLLDI INTNGLQMLH NILKQNRDTF LRRPIIRKLL KVLEFLALKG ILRAEKINEE APREEMERFR DSMLKLTRHS DKQVQTIARH
1601: FCEKWIHPYM DGPVSTSKWC TDSYSNRRKR KSRWDYQPES HYKMVGSLVR KVYGELGLQA GLTRNRSQPV MGSSSTGTDD DVPPGFEPQQ GRSVAPGFCH
1701: PNLNISYGIP IAHVQHLGTP EVEGGGNRGQ KWKVAPGVPF IPFPQLRRGS PCPSTSTQMS CHDAMRQNNS SGHRGRGFDR GGRVQRNGRN GARTRYPYDH
1801: QGRRFPSNHH RSERWQPWPD EHDGGSGSRG RQ
0101: GEVSEHRTGM ERAACGSQGG GMLSFDRGFW KGAVGDKNQF PRMEGCHENG GLSDLGNHDT DKFPQGADAL SLIDDNHELG RDCFLANIDE EVSFPVDEAS
0201: IPSFYQKSYM DVFVEDSKSC IEKLTQDSLE GDMLSCERDA RFRTEASGDE NQHHRMAVSK GQVSSICKDA NSPSLNACGL FPEIEVLRQQ ADKEYKVFEL
0301: PPEIYLARSS YNPPCLDGLC RSGKESSAVC LGHQDSSGVK SRCPDHLVQE LNAYNSSIDK PCSANFVETA NDEESQNKIS ESLNASKRRN PRRAASSRNR
0401: APAEHDHQIN KGSSSTCKSK KVESSCSLVE STLIKFPSKT TKVRSGINRP VNSTAWGSLE KLVDGFGQNC EPSTSNSHLI SLENGGRSNK RSGKKEQPIV
0501: RKARSSRCPK NKFPAFSVTR YAPDELNGEP TFSVMDGAYG SAEGYIGNFP KLAPRAFLNV SDDAHRSVQH MSIQTDMQQL DRCLDSVAQE TCPAYMCGEF
0601: AKSISEPSLN NGGVGFSPDS VLEVASVTCE NNTSASHDVK LRGNPSYPAV LTESDLHASD LSIPDFGKNH ASSSTDFEQQ PKTVRGDENT RSEEINQSHA
0701: IIGYVGEGKV QGLEKSNAVR KTKMLEKQKG RKKDGIKGNN IRDGSSTKIS SSEASKYRVF SDDPSSLVSS GPLKFSSCFE VVTSATQGIS MHEHGWVQGP
0801: SVIGKEKTSA LNNVKSPRCK KSGGLRGKKD MVRDPHVKQE SKKKNIADAI FIDSGSSTLP YQLATDLATS HTNEHGYRSP AIEYTFQNPA AISTELPGNA
0901: AGSTGGVSVP QPKRAAWACC DDCQKWRCIP SELADVIGEN RWTCKDNDDK AFADCSIPQA KTNAEINAEL ELSDASADEA DKDGSNSKAS RAPSWTNLRS
1001: NTYLHRNRRN QSIDESMVCN CKPPQEGRMG CRDGCLNRML NIECAKRTCP CEEQCSNQQF QRRNYAKIAW FHSGKKGYGL KLQEEVSEGR FLIEYVGEVL
1101: DITTYESRQR DYASKGKKHF YFMALDGGEV IDACTKGNLG RFINHSCSPN CRTEKWMVNG EVCIGIFAMR NIKKGEELTF DYNYVRVSGA APQKCFCGTA
1201: KCRGYIGGDI SGSGISTQHV AEAEYFEPTV TYKDAEEMLG NACSHGANPI VVELEHETSI QQEDSNNCIP VTPDSEPHQT SPVTPDSEPH QTSPILFENS
1301: ELENSWEMWS PQDAEDPTRT PVHVPRTIDS TLQQLPVYDT QPLEFLPKAP NTMDGSEAPN VMNQSARSSD LGQNLVVPGF HAKKKNNLKD QRDVKSSSCS
1401: TDNENTLGVE ARLNNLLDRD GGISRRKDST NGYLRLLLFV TAAARDNAAA AAARDNAAAS AARDNAAAAA AYDATAMEHE NAATPAERDN AGGTSKSARD
1501: LSLILDALLK TKSRSVLLDI INTNGLQMLH NILKQNRDTF LRRPIIRKLL KVLEFLALKG ILRAEKINEE APREEMERFR DSMLKLTRHS DKQVQTIARH
1601: FCEKWIHPYM DGPVSTSKWC TDSYSNRRKR KSRWDYQPES HYKMVGSLVR KVYGELGLQA GLTRNRSQPV MGSSSTGTDD DVPPGFEPQQ GRSVAPGFCH
1701: PNLNISYGIP IAHVQHLGTP EVEGGGNRGQ KWKVAPGVPF IPFPQLRRGS PCPSTSTQMS CHDAMRQNNS SGHRGRGFDR GGRVQRNGRN GARTRYPYDH
1801: QGRRFPSNHH RSERWQPWPD EHDGGSGSRG RQ
0001: MDCKENGVGD ASGCNIDANS LASNLAMNTN EDFYEKLSSR GQNLDSVSSL EIPQTASSVN HTIEGQRKCF TEIEQMGYGN SNSQEDAGNT DDDLYVCYNA
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
0101: DDTQEQGVVS GELEQSQELI CDTDLLVNCN KLDDGKESQD TNVSLVSIFS GSMQEKEAPQ AKEDEGYGGT TLPIGGSGID TESTFVNDAP EQFESLETTK
0201: HIKPDEVESD GISYRFDDGG KEGRNGPSSD LDTGSSDDIS LSQSFSFPDS LLDSSVFGCS ATESYLEDAI DIEGNGTIVV SPSLAITEML NNDDGGLCSH
0301: DLNKITVTET INPDLKLVRE DRLDTDLSVM NEKMLKNHVG DSSSESAVAA LSMNNGMAAD LRAENFSQSS PIDEKTLDME ANSPITDSSL IWNFPLNFGS
0401: GGIEVCNPEN AVEPLRIVDD NGRIGGEVAS ASGSDFCEAG MSSSRRKARD GKQCKVVQTK TSARHLRKSS RKKQSERDIE SIFKCSKQKR SSLLKTSRSS
0501: EWGLPSKTTE IFLQSNNIPY DGPPHHEPQR SQGNLNNGEH NRSSHNGNVE GSNRNIQASS GSCLRLKVKF GKSGGQNPLN ITVSKVSGNS LPGNGIVKAG
0601: TCLELPGSAH FGEDKMQTVE TKEDLVEKSN PVEKVSYLQS SDSMRDKKYN QDAGGLCRKV GGDVLDDDPH LSSIRMVEEC ERATGTQSLD AETSPDSEVI
0701: NSVPDSIVNI EHKEGLHHGF FSTPEDVVKK NRVLEKEDEL RASKSPSENG SHLIPNAKKA KHPKSKSNGT KKGKSKFSES AKDGRKNESH EGVEQRKSLN
0801: TSMGRDDSDY PEVGRIESHK TTGALLDADI GKTSATYGTI SSDVTHGEMV VDVTIEDSYS TESAWVRCDD CFKWRRIPAS VVGSIDESSR WICMNNSDKR
0901: FADCSKSQEM SNEEINEELG IGQDEADAYD CDAAKRGKEK EQKSKRLTGK QKACFKAIKT NQFLHRNRKS QTIDEIMVCH CKPSPDGRLG CGEECLNRML
1001: NIECLQGTCP AGDLCSNQQF QKRKYVKFER FQSGKKGYGL RLLEDVREGQ FLIEYVGEVL DMQSYETRQK EYAFKGQKHF YFMTLNGNEV IDAGAKGNLG
1101: RFINHSCEPN CRTEKWMVNG EICVGIFSMQ DLKKGQELTF DYNYVRVFGA AAKKCYCGSS HCRGYIGGDP LNGDVIIQSD SDEEYPELVI LDDDESGEGI
1201: LGATSRTFTD DADEQMPQSF EKVNGYKDLA PDNTQTQSSV SVKLPEREIP PPLLQPTEVL KELSSGISIT AVQQEVPAEK KTKSTSPTSS SLSRMSPGGT
1301: NSDKTTKHGS GEDKKILPRP RPRMKTSRSS ESSKRDKGGI YPGVNKAQVI PVNKLQQQPI KSKGSEKVSP SIETFEGKLN ELLDAVGGIS KRRDSAKGYL
1401: KLLLLTAASR GTDEEGIYSN RDLSMILDAL LKTKSKSVLV DIINKNGLQM LHNIMKQYRG DFKRIPIIRK LLKVLEYLAT RKILALEHII RRPPFAGMES
1501: FKDSVLSFTE HDDYTVHNIA RSFRDRWIPK HFRKPWRINR EERSESMRSP INRRFRASQE PRYDHQSPRP AEPAASVTSS KAATPETASV SEGYSEPNSG
1601: LPETNGRKRK SRWDQPSKTK EQRIMTILSQ QTDETNGNQD VQDDLPPGFS SPCTDVPDAI TAQPQQKFLS RLPVSYGIPL SIVHQFGSPG KEDPTTWSVA
1701: PGMPFYPFPP LPPVSHGEFF AKRNVRACSS SMGNLTYSNE ILPATPVTDS TAPTRKRELF SSDIGTTYFR QQKQSVPPWL RNNGGEKTAN SPIPGNLTLE
1801: KKLNS
Arabidopsis Description
EFShistone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) [Source:TAIR;Acc:AT1G77300]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.