Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G028500.2 | Wheat | nucleus | 96.01 | 96.01 |
| TraesCS7A01G128600.1 | Wheat | nucleus | 92.89 | 93.01 |
| HORVU7Hr1G026910.29 | Barley | cytosol, nucleus | 80.3 | 81.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.37 | 53.44 |
| TraesCS7D01G127100.2 | Wheat | nucleus | 58.23 | 52.65 |
| Os06t0275500-01 | Rice | nucleus | 56.86 | 50.89 |
| EER89265 | Sorghum | plastid | 57.48 | 49.41 |
| KRH77020 | Soybean | nucleus | 50.25 | 46.81 |
| KRH28444 | Soybean | nucleus | 50.12 | 46.69 |
| VIT_07s0031g00320.t01 | Wine grape | nucleus | 49.88 | 45.82 |
| Zm00001d036296_P004 | Maize | nucleus, plastid | 54.24 | 44.21 |
| Solyc03g044380.2.1 | Tomato | nucleus | 50.0 | 43.54 |
| PGSC0003DMT400084490 | Potato | nucleus | 49.5 | 43.06 |
| AT2G23380.1 | Thale cress | nucleus | 48.13 | 42.79 |
| CDY38942 | Canola | nucleus, plastid | 47.76 | 42.23 |
| Bra032169.1-P | Field mustard | nucleus, plastid | 47.63 | 42.12 |
| CDX89569 | Canola | nucleus, plastid | 47.76 | 42.09 |
| TraesCS4D01G184600.3 | Wheat | nucleus, plastid | 40.15 | 36.18 |
| PGSC0003DMT400010235 | Potato | nucleus | 36.03 | 35.29 |
| TraesCS7D01G443000.1 | Wheat | nucleus | 6.86 | 16.27 |
| TraesCS5D01G184500.1 | Wheat | nucleus | 6.98 | 15.77 |
| TraesCS3D01G369900.1 | Wheat | plastid | 7.73 | 13.75 |
| TraesCS7D01G318100.1 | Wheat | nucleus | 6.48 | 12.24 |
| TraesCS2D01G300800.1 | Wheat | nucleus | 7.36 | 11.75 |
| TraesCS6D01G202600.1 | Wheat | nucleus | 9.6 | 10.09 |
| TraesCS3D01G144300.2 | Wheat | plastid | 11.85 | 9.56 |
| TraesCS3D01G237600.2 | Wheat | nucleus | 11.72 | 9.2 |
| TraesCS5D01G170100.5 | Wheat | nucleus, plastid | 10.35 | 7.35 |
| TraesCS5D01G051200.1 | Wheat | nucleus, plastid | 9.73 | 6.03 |
| TraesCS5D01G366700.1 | Wheat | plastid | 10.6 | 4.39 |
| TraesCS2D01G007100.1 | Wheat | nucleus | 9.6 | 4.2 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.1.1.4 | MapMan:12.3.3.3 | Gene3D:2.170.270.10 | InterPro:CXC_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0031519 | InterPro:Hist-Lys_N-MeTrfase_EZ | InterPro:IPR001214 | InterPro:IPR025778 | InterPro:IPR026489 | PFAM:PF00856 |
| PFscan:PS50280 | PFscan:PS51576 | PFscan:PS51633 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF237 | InterPro:SET_dom |
| SMART:SM00317 | SMART:SM01114 | SUPFAM:SSF82199 | InterPro:Tesmin/TSO1-like_CXC | EnsemblPlantsGene:TraesCS7D01G127400 | EnsemblPlants:TraesCS7D01G127400.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:79627007..79636522
Molecular Weight (calculated)
89209.4 Da
IEP (calculated)
7.614
GRAVY (calculated)
-0.735
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDRHRSPE SDGIRRIRSF SAVSNNARVD LVPQDDEAIP DGELGEVSVP TYVNSLKNEF ATLRSAEIKD MVENNKIKLS TIMQSNRGSS TIWQTSALDG
101: TGLATNPLTP RQDDASCSTL GLELCLAEKD GGSSQEDSPY GTSTATLGGI LTAKNANKPI ELPTVSDLPP YTTWVFLDRN QRMTEDQSAF HRQNIYYNAD
201: CGGALMFSDS EDEVVEDEEE KREFKSSEDC FIRMTIDGCG MSDEALETLA HCFEKTPGDI KARYEILQRE STESSSKEVS KLNAKLKDIY HDKDLAAALD
301: SFDNLFCRRC LVFDCKLHGC SQDIIFPAEK QSPWNSRDDV PCGIHCYKLA TKHKDSIAYS QHNSPSTRSS RKKDAHQMEN NSALVEDRNY LMVETNNEHS
401: ATDGHDSSRK EELVDKNICR QEDNFVSWMV IEHELLVKGV EIFGRNSCLI ARNLLAGEKR CSDVFQYMNY IENSSTSEGH GLGLGSRRPR KRGRVKHASR
501: STVYRFIRKR IAAMKGELRQ HYNPCGCQSA CGKQCPCRKN DTCCEKFCGC PKACKNRFRG CNCAKAQCRS RQCPCFAADR ECDPDVCRKC GVGCGDGSLG
601: VPNQRGDNYG CQNMKLLLRQ QQKVVLGRSD VSGWGAFVKN TVGKDDCLGE YTGELISHRE AAKRGQRYDR ENSSFLFNLN TEFVLDAFRM GNKLKFANHS
701: PDPNCYAKVM FVAGDHRVGI FANERINAGK EIFYDYHYAP DEAPAWALKA DDATGAKDPG QSSSGSAKKA DAPGAKDPGQ SSSGRAKRPG KSSRGRPRKH
801: AR
101: TGLATNPLTP RQDDASCSTL GLELCLAEKD GGSSQEDSPY GTSTATLGGI LTAKNANKPI ELPTVSDLPP YTTWVFLDRN QRMTEDQSAF HRQNIYYNAD
201: CGGALMFSDS EDEVVEDEEE KREFKSSEDC FIRMTIDGCG MSDEALETLA HCFEKTPGDI KARYEILQRE STESSSKEVS KLNAKLKDIY HDKDLAAALD
301: SFDNLFCRRC LVFDCKLHGC SQDIIFPAEK QSPWNSRDDV PCGIHCYKLA TKHKDSIAYS QHNSPSTRSS RKKDAHQMEN NSALVEDRNY LMVETNNEHS
401: ATDGHDSSRK EELVDKNICR QEDNFVSWMV IEHELLVKGV EIFGRNSCLI ARNLLAGEKR CSDVFQYMNY IENSSTSEGH GLGLGSRRPR KRGRVKHASR
501: STVYRFIRKR IAAMKGELRQ HYNPCGCQSA CGKQCPCRKN DTCCEKFCGC PKACKNRFRG CNCAKAQCRS RQCPCFAADR ECDPDVCRKC GVGCGDGSLG
601: VPNQRGDNYG CQNMKLLLRQ QQKVVLGRSD VSGWGAFVKN TVGKDDCLGE YTGELISHRE AAKRGQRYDR ENSSFLFNLN TEFVLDAFRM GNKLKFANHS
701: PDPNCYAKVM FVAGDHRVGI FANERINAGK EIFYDYHYAP DEAPAWALKA DDATGAKDPG QSSSGSAKKA DAPGAKDPGQ SSSGRAKRPG KSSRGRPRKH
801: AR
001: MEKENHEDDG EGLPPELNQI KEQIEKERFL HIKRKFELRY IPSVATHASH HQSFDLNQPA AEDDNGGDNK SLLSRMQNPL RHFSASSDYN SYEDQGYVLD
101: EDQDYALEED VPLFLDEDVP LLPSVKLPIV EKLPRSITWV FTKSSQLMAE SDSVIGKRQI YYLNGEALEL SSEEDEEDEE EDEEEIKKEK CEFSEDVDRF
201: IWTVGQDYGL DDLVVRRALA KYLEVDVSDI LERYNELKLK NDGTAGEASD LTSKTITTAF QDFADRRHCR RCMIFDCHMH EKYEPESRSS EDKSSLFEDE
301: DRQPCSEHCY LKVRSVTEAD HVMDNDNSIS NKIVVSDPNN TMWTPVEKDL YLKGIEIFGR NSCDVALNIL RGLKTCLEIY NYMREQDQCT MSLDLNKTTQ
401: RHNQVTKKVS RKSSRSVRKK SRLRKYARYP PALKKTTSGE AKFYKHYTPC TCKSKCGQQC PCLTHENCCE KYCGCSKDCN NRFGGCNCAI GQCTNRQCPC
501: FAANRECDPD LCRSCPLSCG DGTLGETPVQ IQCKNMQFLL QTNKKILIGK SDVHGWGAFT WDSLKKNEYL GEYTGELITH DEANERGRIE DRIGSSYLFT
601: LNDQLEIDAR RKGNEFKFLN HSARPNCYAK LMIVRGDQRI GLFAERAIEE GEELFFDYCY GPEHADWSRG REPRKTGASK RSKEARPAR
101: EDQDYALEED VPLFLDEDVP LLPSVKLPIV EKLPRSITWV FTKSSQLMAE SDSVIGKRQI YYLNGEALEL SSEEDEEDEE EDEEEIKKEK CEFSEDVDRF
201: IWTVGQDYGL DDLVVRRALA KYLEVDVSDI LERYNELKLK NDGTAGEASD LTSKTITTAF QDFADRRHCR RCMIFDCHMH EKYEPESRSS EDKSSLFEDE
301: DRQPCSEHCY LKVRSVTEAD HVMDNDNSIS NKIVVSDPNN TMWTPVEKDL YLKGIEIFGR NSCDVALNIL RGLKTCLEIY NYMREQDQCT MSLDLNKTTQ
401: RHNQVTKKVS RKSSRSVRKK SRLRKYARYP PALKKTTSGE AKFYKHYTPC TCKSKCGQQC PCLTHENCCE KYCGCSKDCN NRFGGCNCAI GQCTNRQCPC
501: FAANRECDPD LCRSCPLSCG DGTLGETPVQ IQCKNMQFLL QTNKKILIGK SDVHGWGAFT WDSLKKNEYL GEYTGELITH DEANERGRIE DRIGSSYLFT
601: LNDQLEIDAR RKGNEFKFLN HSARPNCYAK LMIVRGDQRI GLFAERAIEE GEELFFDYCY GPEHADWSRG REPRKTGASK RSKEARPAR
Arabidopsis Description
MEAHistone-lysine N-methyltransferase MEDEA [Source:UniProtKB/Swiss-Prot;Acc:O65312]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.