Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G35670.1 TraesCS4A01G121300.4 AT1G02580.1 15456723
AT2G35670.1 TraesCS4B01G181400.3 AT1G02580.1 15456723
AT2G35670.1 TraesCS4D01G184600.3 AT1G02580.1 15456723
AT2G35670.1 TraesCS4A01G121300.4 AT1G02580.1 16924116
AT2G35670.1 TraesCS4B01G181400.3 AT1G02580.1 16924116
AT2G35670.1 TraesCS4D01G184600.3 AT1G02580.1 16924116
AT2G35670.1 TraesCS7A01G128300.1 AT2G23380.1 15456723
AT2G35670.1 TraesCS7A01G128600.1 AT2G23380.1 15456723
AT2G35670.1 TraesCS7B01G028200.2 AT2G23380.1 15456723
AT2G35670.1 TraesCS7B01G028500.2 AT2G23380.1 15456723
AT2G35670.1 TraesCS7D01G127100.2 AT2G23380.1 15456723
AT2G35670.1 TraesCS7D01G127400.1 AT2G23380.1 15456723
AT2G35670.1 TraesCS7A01G128300.1 AT2G23380.1 16924116
AT2G35670.1 TraesCS7A01G128600.1 AT2G23380.1 16924116
AT2G35670.1 TraesCS7B01G028200.2 AT2G23380.1 16924116
AT2G35670.1 TraesCS7B01G028500.2 AT2G23380.1 16924116
AT2G35670.1 TraesCS7D01G127100.2 AT2G23380.1 16924116
AT2G35670.1 TraesCS7D01G127400.1 AT2G23380.1 16924116
AT2G35670.1 TraesCS4A01G121300.4 AT4G02020.1 15456723
AT2G35670.1 TraesCS4B01G181400.3 AT4G02020.1 15456723
AT2G35670.1 TraesCS4D01G184600.3 AT4G02020.1 15456723
AT2G35670.1 TraesCS4A01G121300.4 AT4G02020.1 16924116
AT2G35670.1 TraesCS4B01G181400.3 AT4G02020.1 16924116
AT2G35670.1 TraesCS4D01G184600.3 AT4G02020.1 16924116
AT4G16845.1 TraesCS7A01G128300.1 AT2G23380.1 15456723
AT4G16845.1 TraesCS7A01G128600.1 AT2G23380.1 15456723
AT4G16845.1 TraesCS7B01G028200.2 AT2G23380.1 15456723
AT4G16845.1 TraesCS7B01G028500.2 AT2G23380.1 15456723
AT4G16845.1 TraesCS7D01G127100.2 AT2G23380.1 15456723
AT4G16845.1 TraesCS7D01G127400.1 AT2G23380.1 15456723
AT4G16845.1 TraesCS4A01G121300.4 AT4G02020.1 15456723
AT4G16845.1 TraesCS4B01G181400.3 AT4G02020.1 15456723
AT4G16845.1 TraesCS4D01G184600.3 AT4G02020.1 15456723
AT5G51230.1 TraesCS1A01G019500.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS1A01G019600.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS1B01G023300.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS1B01G023600.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS1B01G023700.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS1B01G049600.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS1D01G019100.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS1D01G019200.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS7A01G155400.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS7B01G059500.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS7D01G155700.1 AT1G30530.1 23778966
AT5G51230.1 TraesCS7A01G128300.1 AT2G23380.1 15456723
AT5G51230.1 TraesCS7A01G128600.1 AT2G23380.1 15456723
AT5G51230.1 TraesCS7B01G028200.2 AT2G23380.1 15456723
AT5G51230.1 TraesCS7B01G028500.2 AT2G23380.1 15456723
AT5G51230.1 TraesCS7D01G127100.2 AT2G23380.1 15456723
AT5G51230.1 TraesCS7D01G127400.1 AT2G23380.1 15456723
AT5G51230.1 TraesCS4A01G388400.1 AT3G20740.1 23778966
AT5G51230.1 TraesCS7A01G089100.1 AT3G20740.1 23778966
AT5G51230.1 TraesCS7A01G089200.1 AT3G20740.1 23778966
AT5G51230.1 TraesCS7A01G308300.1 AT3G20740.1 23778966
AT5G51230.1 TraesCS7D01G084500.1 AT3G20740.1 23778966
AT5G51230.1 TraesCS7D01G305100.1 AT3G20740.1 23778966
AT5G51230.1 TraesCS4A01G121300.4 AT4G02020.1 15456723
AT5G51230.1 TraesCS4B01G181400.3 AT4G02020.1 15456723
AT5G51230.1 TraesCS4D01G184600.3 AT4G02020.1 15456723
AT5G51230.1 TraesCS4A01G121300.4 AT4G02020.1 23778966
AT5G51230.1 TraesCS4B01G181400.3 AT4G02020.1 23778966
AT5G51230.1 TraesCS4D01G184600.3 AT4G02020.1 23778966
AT5G51230.1 TraesCS5B01G378700.1 AT5G58230.1 23778966
AT5G51230.1 TraesCS5D01G385600.1 AT5G58230.1 23778966
AT5G51230.1 TraesCS5D01G385800.1 AT5G58230.1 23778966
AT5G51230.1 TraesCSU01G072700.1 AT5G58230.1 23778966
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G183300.1 Wheat nucleus 95.31 95.31
CDY43476 Canola nucleus 25.0 21.48
VIT_02s0234g00020.t01 Wine grape cytosol, extracellular, nucleus 27.34 15.09
TraesCS3B01G073800.1 Wheat nucleus 28.91 14.45
TraesCSU01G075500.1 Wheat nucleus 29.69 11.91
CDX84180 Canola cytosol 19.53 11.42
KRH77315 Soybean nucleus 35.16 10.51
TraesCS2D01G000600.1 Wheat cytosol 49.22 10.45
KRH28171 Soybean nucleus 32.81 9.88
CDY71414 Canola nucleus 28.12 8.96
CDX76587 Canola nucleus 28.12 8.51
Bra021078.1-P Field mustard nucleus 28.12 8.47
Os09t0306800-01 Rice cytosol, nucleus 39.84 8.42
KXG37542 Sorghum nucleus 38.28 8.15
TraesCS5D01G184200.2 Wheat nucleus 40.62 8.15
HORVU5Hr1G054730.1 Barley nucleus 39.84 8.01
AT4G16845.1 Thale cress nucleus 27.34 7.95
VIT_16s0013g00860.t01 Wine grape nucleus 38.28 7.4
GSMUA_Achr2P11170_001 Banana nucleus 39.06 7.25
Solyc03g093640.2.1 Tomato nucleus 35.94 7.21
OQU89244 Sorghum nucleus 35.16 7.18
GSMUA_Achr4P29640_001 Banana nucleus 36.72 7.1
AT5G51230.1 Thale cress nucleus 33.59 6.81
Bra015200.1-P Field mustard nucleus, plastid 33.59 6.8
CDX99960 Canola nucleus 33.59 6.8
CDY00460 Canola nucleus, plastid 33.59 6.8
CDY16330 Canola nucleus 32.81 6.65
Bra022541.1-P Field mustard nucleus 32.81 6.65
KRG90126 Soybean nucleus 31.25 6.58
KRH33365 Soybean nucleus 31.25 6.58
Zm00001d020036_P002 Maize nucleus 35.16 6.57
CDX91573 Canola nucleus 31.25 6.35
CDY33160 Canola nucleus 21.88 6.09
Bra005316.1-P Field mustard nucleus 10.94 5.91
CDY35632 Canola cytosol 20.31 5.75
VIT_00s1675g00010.t01 Wine grape cytosol 5.47 5.65
CDY42943 Canola nucleus 18.75 5.16
Bra040097.1-P Field mustard nucleus 18.75 5.16
VIT_02s0234g00050.t01 Wine grape nucleus 14.84 5.04
Zm00001d034036_P003 Maize golgi 22.66 4.76
CDY31712 Canola nucleus 10.94 4.01
KRH34601 Soybean nucleus 24.22 3.95
CDY38857 Canola nucleus 21.88 3.76
CDY00458 Canola cytosol 9.38 3.49
Bra015201.1-P Field mustard cytosol 9.38 3.49
CDX84179 Canola cytosol 10.16 3.19
AT2G35670.1 Thale cress nucleus 18.75 3.18
Bra029179.1-P Field mustard nucleus 21.09 3.12
CDX75032 Canola mitochondrion, nucleus 8.59 2.88
Bra005262.1-P Field mustard mitochondrion 8.59 2.88
AT4G16810.1 Thale cress nucleus 3.91 1.67
Protein Annotations
EnsemblPlants:TraesCS5D01G388900.1EnsemblPlantsGene:TraesCS5D01G388900PANTHER:PTHR22597PANTHER:PTHR22597:SF8MapMan:35.1:
Description
No Description!
Coordinates
chr5D:-:458280212..458285066
Molecular Weight (calculated)
14186.2 Da
IEP (calculated)
9.252
GRAVY (calculated)
-0.223
Length
128 amino acids
Sequence
(BLAST)
001: MCRQPSTIQL SPNEQLANEE TFKLHCKPVE LCIVIRKRAI DNPAFLQRCL RYMIQASHKK RNTRVGCLDC CLPVLSSASG RLDVIMGNGH SWPSAVLTPA
101: SSTYSSRTPL ASRVCTVEGW WPSSPAGR
Best Arabidopsis Sequence Match ( AT5G51230.2 )
(BLAST)
001: MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAGVQTQK
101: LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK
201: IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR
301: TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SRRRQKSQVR
401: SSRQGPHLGL GCEVLDKTDD AHSVRSEKSR IPPGKHYERI GGAESGQRVP PGTSPADVQS CGDPDYVQSI AGSTMLQFAK TRKISIERSD LRNRSLLQKR
501: QFFHSHRAQP MALEQVLSDR DSEDEVDDDV ADFEDRRMLD DFVDVTKDEK QMMHMWNSFV RKQRVLADGH IPWACEAFSR LHGPIMVRTP HLIWCWRVFM
601: VKLWNHGLLD ARTMNNCNTF LEQLQI
Arabidopsis Description
EMF2Polycomb group protein EMBRYONIC FLOWER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Y4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.