Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P11140_001 | Banana | cytosol | 11.93 | 71.17 |
| GSMUA_Achr2P11170_001 | Banana | nucleus | 73.72 | 70.72 |
| Os09t0306800-01 | Rice | cytosol, nucleus | 54.23 | 59.24 |
| KXG37542 | Sorghum | nucleus | 52.11 | 57.4 |
| HORVU5Hr1G054730.1 | Barley | nucleus | 53.02 | 55.1 |
| TraesCS5D01G184200.2 | Wheat | nucleus | 52.87 | 54.86 |
| OQU89244 | Sorghum | nucleus | 51.81 | 54.7 |
| TraesCS5A01G179600.1 | Wheat | nucleus | 52.72 | 54.7 |
| TraesCS2D01G000600.1 | Wheat | cytosol | 48.94 | 53.73 |
| TraesCS5B01G177400.2 | Wheat | nucleus | 53.32 | 53.73 |
| TraesCS2A01G000100.1 | Wheat | nucleus | 48.79 | 53.48 |
| TraesCS2B01G023900.1 | Wheat | cytosol | 47.89 | 52.83 |
| Zm00001d034036_P003 | Maize | golgi | 48.49 | 52.71 |
| HORVU2Hr1G000010.32 | Barley | nucleus | 48.04 | 52.48 |
| Zm00001d020036_P002 | Maize | nucleus | 51.66 | 49.93 |
| TraesCS3B01G073800.1 | Wheat | nucleus | 19.03 | 49.22 |
| TraesCSU01G075500.1 | Wheat | nucleus | 23.26 | 48.28 |
| Os04t0162100-01 | Rice | nucleus | 43.05 | 45.67 |
| TraesCS2A01G002500.1 | Wheat | nucleus | 43.5 | 44.44 |
| TraesCS2B01G020400.3 | Wheat | nucleus | 42.6 | 43.93 |
| KXG25810 | Sorghum | nucleus | 39.27 | 42.9 |
| HORVU2Hr1G000390.20 | Barley | nucleus | 42.75 | 42.81 |
| TraesCS4D01G183300.1 | Wheat | nucleus | 7.7 | 39.84 |
| TraesCS5D01G388900.1 | Wheat | nucleus | 7.1 | 36.72 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P29640_001 | EnsemblPlants:GSMUA_Achr4T29640_001 | EnsemblPlantsGene:GSMUA_Achr4G29640_001 | InterPro:Polycomb_protein_VEFS-Box | PANTHER:PTHR22597 | PANTHER:PTHR22597:SF0 |
| PFAM:PF09733 | SEG:seg | UniParc:UPI0002949D0F | UniProt:M0ST76 | MapMan:12.3.3.1.1.3 | MapMan:15.5.15 |
Description
Polycomb group protein EMBRYONIC FLOWER 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G29640_001]
Coordinates
chr4:+:27510880..27531490
Molecular Weight (calculated)
75613.5 Da
IEP (calculated)
7.224
GRAVY (calculated)
-0.325
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGLSLAVRE TMNHGCSCSQ SRTDQMCHEQ SRVRLTAEEQ LAAEESLSVY CKPVELYNIL QRRAIQNPSF LQRCLQYKMQ AKRKRRIQII ISLIGSLNAE
101: KEHLFPLYVL LARPVADSAV AEHSAVYRLS RPCVLTNFSE FGKKAHMEAS FVIPEIRKLI TNARANNLNI IIISKGESKG GFGGNHLLNE HEEWSSFLKT
201: INGEVAKWFA TLDKFDLLKL EGNCLCGKIP VDSLCLSLEK CVTLSLGHRT DMLSAVNMQP SILEPKYLGK NDCIFLQTQN IDSANTCQVK VSICAQEVGA
301: SETSPYDFYS YDDVPTSSLP QIIRLRMGNV LFNYRYYNNM LQKTEVTEDF SCPFCLVKCS SFKGLRYHLN SNHDLFNFEF WVTEEYQAVN VSVRTDIWRS
401: EVASDGVDPR LQTFFYCSNF MRSRRSKNSV QTASHVHPHV LESGLPEAAL EVLRLQMDVM VRCTRHILSC PDTIGACVVT TQGSTSNDSG QQASGNNLAS
501: QNMLQFSKMR KISDERADPR NRALLQKRQF FHSHRAQPMA LEQVFLDRDS EDEVDDDIAD FEDRRMLDDF VDVTKDEKQI MHLWNSFVRK QRVLADGHIS
601: WACEAFSQIH GQELVRSPAL MWCWRLFMIK LWNHSLLDAR TMNNCSLILE RNQNEALGAK QN
101: KEHLFPLYVL LARPVADSAV AEHSAVYRLS RPCVLTNFSE FGKKAHMEAS FVIPEIRKLI TNARANNLNI IIISKGESKG GFGGNHLLNE HEEWSSFLKT
201: INGEVAKWFA TLDKFDLLKL EGNCLCGKIP VDSLCLSLEK CVTLSLGHRT DMLSAVNMQP SILEPKYLGK NDCIFLQTQN IDSANTCQVK VSICAQEVGA
301: SETSPYDFYS YDDVPTSSLP QIIRLRMGNV LFNYRYYNNM LQKTEVTEDF SCPFCLVKCS SFKGLRYHLN SNHDLFNFEF WVTEEYQAVN VSVRTDIWRS
401: EVASDGVDPR LQTFFYCSNF MRSRRSKNSV QTASHVHPHV LESGLPEAAL EVLRLQMDVM VRCTRHILSC PDTIGACVVT TQGSTSNDSG QQASGNNLAS
501: QNMLQFSKMR KISDERADPR NRALLQKRQF FHSHRAQPMA LEQVFLDRDS EDEVDDDIAD FEDRRMLDDF VDVTKDEKQI MHLWNSFVRK QRVLADGHIS
601: WACEAFSQIH GQELVRSPAL MWCWRLFMIK LWNHSLLDAR TMNNCSLILE RNQNEALGAK QN
001: MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAGVQTQK
101: LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK
201: IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR
301: TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SSKKFRRRRQ
401: KSQVRSSRQG PHLGLGCEVL DKTDDAHSVR SEKSRIPPGK HYERIGGAES GQRVPPGTSP ADVQSCGDPD YVQSIAGSTM LQFAKTRKIS IERSDLRNRS
501: LLQKRQFFHS HRAQPMALEQ VLSDRDSEDE VDDDVADFED RRMLDDFVDV TKDEKQMMHM WNSFVRKQRV LADGHIPWAC EAFSRLHGPI MVRTPHLIWC
601: WRVFMVKLWN HGLLDARTMN NCNTFLEQLQ I
101: LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK
201: IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR
301: TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SSKKFRRRRQ
401: KSQVRSSRQG PHLGLGCEVL DKTDDAHSVR SEKSRIPPGK HYERIGGAES GQRVPPGTSP ADVQSCGDPD YVQSIAGSTM LQFAKTRKIS IERSDLRNRS
501: LLQKRQFFHS HRAQPMALEQ VLSDRDSEDE VDDDVADFED RRMLDDFVDV TKDEKQMMHM WNSFVRKQRV LADGHIPWAC EAFSRLHGPI MVRTPHLIWC
601: WRVFMVKLWN HGLLDARTMN NCNTFLEQLQ I
Arabidopsis Description
EMF2Polycomb group protein EMBRYONIC FLOWER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Y4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.