Factsheet for Os09t0306800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0307800-01
Os03t0640100-01
Os06t0192100-00
Os06t0275500-01
Os07t0148200-01
Os08t0137100-01
Os08t0137250-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G35670.1	Os03t0307800-01	AT1G02580.1	15456723
AT2G35670.1	Os03t0307800-01	AT1G02580.1	16924116
AT2G35670.1	Os06t0275500-01	AT2G23380.1	15456723
AT2G35670.1	Os06t0275500-01	AT2G23380.1	16924116
AT2G35670.1	Os03t0307800-01	AT4G02020.1	15456723
AT2G35670.1	Os03t0307800-01	AT4G02020.1	16924116
AT4G16845.1	Os06t0275500-01	AT2G23380.1	15456723
AT4G16845.1	Os03t0307800-01	AT4G02020.1	15456723
AT5G51230.1	Os06t0192100-00	AT1G30530.1	23778966
AT5G51230.1	Os07t0148200-01	AT1G30530.1	23778966
AT5G51230.1	Os06t0275500-01	AT2G23380.1	15456723
AT5G51230.1	Os08t0137100-01	AT3G20740.1	23778966
AT5G51230.1	Os08t0137250-01	AT3G20740.1	23778966
AT5G51230.1	Os03t0307800-01	AT4G02020.1	15456723
AT5G51230.1	Os03t0307800-01	AT4G02020.1	23778966
AT5G51230.1	Os03t0640100-01	AT5G58230.1	23778966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1675g00010.t01	Wine grape	cytosol	16.67	81.45
KXG37542	Sorghum	nucleus	79.37	80.03
HORVU5Hr1G054730.1	Barley	nucleus	81.68	77.71
TraesCS5A01G179600.1	Wheat	nucleus	81.68	77.59
TraesCS5D01G184200.2	Wheat	nucleus	81.52	77.43
OQU89244	Sorghum	nucleus	78.38	75.76
TraesCS5B01G177400.2	Wheat	nucleus	81.52	75.19
Zm00001d034036_P003	Maize	golgi	74.42	74.06
TraesCS2D01G000600.1	Wheat	cytosol	73.43	73.8
HORVU2Hr1G000010.32	Barley	nucleus	73.43	73.43
TraesCS2A01G000100.1	Wheat	nucleus	73.1	73.34
TraesCS2B01G023900.1	Wheat	cytosol	72.61	73.33
TraesCSU01G075500.1	Wheat	nucleus	38.28	72.73
TraesCS3B01G073800.1	Wheat	nucleus	27.39	64.84
Os04t0162100-01	Rice	nucleus	62.21	60.42
GSMUA_Achr4P29640_001	Banana	nucleus	59.24	54.23
VIT_02s0234g00050.t01	Wine grape	nucleus	33.0	53.05
CDY43476	Canola	nucleus	12.54	51.01
KRH28171	Soybean	nucleus	35.48	50.59
GSMUA_Achr2P11170_001	Banana	nucleus	57.59	50.58
VIT_16s0013g00860.t01	Wine grape	nucleus	54.95	50.3
KRH77315	Soybean	nucleus	35.48	50.23
Solyc03g093640.2.1	Tomato	nucleus	52.15	49.53
AT5G51230.1	Thale cress	nucleus	50.99	48.97
CDX91573	Canola	nucleus	50.83	48.89
CDY16330	Canola	nucleus	50.66	48.58
Bra022541.1-P	Field mustard	nucleus	50.66	48.58
Bra015200.1-P	Field mustard	nucleus, plastid	49.67	47.63
CDY00460	Canola	nucleus, plastid	49.67	47.63
CDX99960	Canola	nucleus	49.51	47.47
KRH33365	Soybean	nucleus	46.7	46.55
KRG90126	Soybean	nucleus	45.71	45.56
CDY00458	Canola	cytosol	25.08	44.19
Bra015201.1-P	Field mustard	cytosol	24.92	43.9
TraesCS4D01G183300.1	Wheat	nucleus	9.08	42.97
CDY71414	Canola	nucleus	27.23	41.04
TraesCS5D01G388900.1	Wheat	nucleus	8.42	39.84
VIT_02s0234g00020.t01	Wine grape	cytosol, extracellular, nucleus	15.02	39.22
AT4G16845.1	Thale cress	nucleus	28.38	39.09
CDX76587	Canola	nucleus	26.9	38.53
Bra021078.1-P	Field mustard	nucleus	26.9	38.35
CDX84180	Canola	cytosol	10.23	28.31
Bra005316.1-P	Field mustard	nucleus	10.73	27.43
Bra040097.1-P	Field mustard	nucleus	19.8	25.81
CDY42943	Canola	nucleus	19.8	25.81
CDY35632	Canola	cytosol	18.98	25.44
CDY33160	Canola	nucleus	16.83	22.17
KRH34601	Soybean	nucleus	28.22	21.81
CDY31712	Canola	nucleus	12.54	21.78
CDY38857	Canola	nucleus	24.75	20.16
Bra029179.1-P	Field mustard	nucleus	28.55	20.02
Bra005262.1-P	Field mustard	mitochondrion	12.38	19.63
CDX75032	Canola	mitochondrion, nucleus	12.38	19.63
CDX84179	Canola	cytosol	12.87	19.12
AT4G16810.1	Thale cress	nucleus	8.42	17.0
AT2G35670.1	Thale cress	nucleus	17.0	13.64

Protein Annotations

MapMan:12.3.3.1.1.3	MapMan:15.5.15	ProteinID:BAF24739.2	ProteinID:BAT07361.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003682	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0031490	EnsemblPlantsGene:Os09g0306800	EnsemblPlants:Os09t0306800-01	PFAM:PF09733	PANTHER:PTHR22597
PANTHER:PTHR22597:SF0	InterPro:Polycomb_protein_VEFS-Box	UniProt:Q0J2S6	UniParc:UPI0001B66DE3	SEG:seg	:

Description

EMBRYONIC FLOWER 2BZinc finger, C2H2-type domain containing protein. (Os09t0306800-01)

Coordinates

chr9:-:7925628..7938161

Molecular Weight (calculated)

68910.4 Da

IEP (calculated)

6.976

GRAVY (calculated)

-0.440

Length

606 amino acids

Sequence
(BLAST)

001: YQMCRHQPRA RLSPDEQLAA EESFALYCKP VELYNIIQRR SIKNPAFLQR CLLYKIHARR KKRSLITISL SGGTNKELRA QNIFPLYVLL ARPTNNVSLE
101: GHSPIYRFSR ACLLTSFHEF GNKDYTEATF VIPDVKNLAT SRACSLNIIL ISCGRAEQTF DDNNCSGNHV EGSTLQKLEG KCFWGKIPID LLASSLGNCV
201: SLSLGHTVEM SSTVEMTPSF LEPKFLEDDS CLTFCSQKVD ATGSFQLQVS ISAQEAGAKD MSESPYSVYS YNDVPPSSLT HIIRLRSGNV LFNYKYYNNT
301: MQKTEVTEDF SCPFCLVPCG SFKGLGCHLN ASHDLFHYEF WISEECQAVN VSLKTDSWRT ELLAEGVDPR HQTFSYRSRF KKRKRVEISS DKIRHVHPHI
401: VDSGSPEDAQ AGSEDDYVQR ENGSSVAHAS VDPANSLHGS NLSAPTVLQF GKTRKLSVER ADPRNRQLLQ KRQFFHSHRA QPMALEQVFS DRDSEDEVDD
501: DIADFEDRRM LDDFVDVTKD EKLIMHMWNS FVRKQRVLAD GHIPWACEAF SQFHGQELVQ NPALLWCWRF FMVKLWNHSL LDARAMNACN TILEGYLNGS
601: SDPKKN

Best Arabidopsis Sequence Match ( AT5G51230.1 )
(BLAST)

001: MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAGVQTQK
101: LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK
201: IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR
301: TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SSKKFRRRRQ
401: KSQVRSSRQG PHLGLGCEVL DKTDDAHSVR SEKSRIPPGK HYERIGGAES GQRVPPGTSP ADVQSCGDPD YVQSIAGSTM LQFAKTRKIS IERSDLRNRS
501: LLQKRQFFHS HRAQPMALEQ VLSDRDSEDE VDDDVADFED RRMLDDFVDV TKDEKQMMHM WNSFVRKQRV LADGHIPWAC EAFSRLHGPI MVRTPHLIWC
601: WRVFMVKLWN HGLLDARTMN NCNTFLEQLQ I

Arabidopsis Description

EMF2Polycomb group protein EMBRYONIC FLOWER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Y4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.