Factsheet for Bra029179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38857	Canola	nucleus	48.38	56.18
Bra015200.1-P	Field mustard	nucleus, plastid	31.25	42.72
Bra022541.1-P	Field mustard	nucleus	31.13	42.56
KRH33365	Soybean	nucleus	22.34	31.74
KRG90126	Soybean	nucleus	21.99	31.25
VIT_02s0234g00020.t01	Wine grape	cytosol, extracellular, nucleus	8.1	30.17
Os09t0306800-01	Rice	cytosol, nucleus	20.02	28.55
TraesCS3B01G073800.1	Wheat	nucleus	8.45	28.52
KXG37542	Sorghum	nucleus	19.79	28.45
TraesCS5D01G184200.2	Wheat	nucleus	20.25	27.43
TraesCS5A01G179600.1	Wheat	nucleus	20.25	27.43
HORVU5Hr1G054730.1	Barley	nucleus	20.02	27.16
OQU89244	Sorghum	nucleus	19.44	26.79
HORVU2Hr1G000010.32	Barley	nucleus	18.63	26.57
TraesCS2B01G023900.1	Wheat	cytosol	18.4	26.5
TraesCS5B01G177400.2	Wheat	nucleus	20.14	26.48
TraesCS2A01G000100.1	Wheat	nucleus	18.4	26.32
TraesCS2D01G000600.1	Wheat	cytosol	18.29	26.2
Bra021078.1-P	Field mustard	nucleus	12.62	25.65
Zm00001d034036_P003	Maize	golgi	17.94	25.45
Zm00001d020036_P002	Maize	nucleus	19.44	24.53
TraesCS2A01G002500.1	Wheat	nucleus	18.17	24.23
TraesCS2B01G020400.3	Wheat	nucleus	17.94	24.14
Os04t0162100-01	Rice	nucleus	17.13	23.72
TraesCS4D01G183300.1	Wheat	nucleus	3.47	23.44
HORVU2Hr1G000390.20	Barley	nucleus	17.82	23.3
KXG25810	Sorghum	nucleus	16.2	23.1
TraesCSU01G194400.1	Wheat	nucleus	3.12	21.77
TraesCSU01G224600.1	Wheat	nucleus	3.12	21.77
KRH34601	Soybean	nucleus	19.21	21.17
TraesCS5D01G388900.1	Wheat	nucleus	3.12	21.09
GSMUA_Achr2P11140_001	Banana	cytosol	2.66	20.72
Bra005316.1-P	Field mustard	nucleus	5.32	19.41
Bra040097.1-P	Field mustard	nucleus	10.3	19.14
Bra015201.1-P	Field mustard	cytosol	6.83	17.15
Bra005262.1-P	Field mustard	mitochondrion	6.6	14.92

Protein Annotations

EnsemblPlants:Bra029179.1	EnsemblPlants:Bra029179.1-P	EnsemblPlantsGene:Bra029179	InterPro:Polycomb_protein_VEFS-Box	ncoils:Coil	PANTHER:PTHR22597
PANTHER:PTHR22597:SF0	PFAM:PF09733	SEG:seg	UniParc:UPI0002540157	UniProt:M4EK62	MapMan:12.3.3.1.1.3
MapMan:15.5.15	:	:	:	:	:

Description

AT5G51230 (E=2e-124) EMF2, VEF2, CYR1 | EMF2 (EMBRYONIC FLOWER 2); DNA binding / transcription factor

Coordinates

chrA03:-:6720825..6734282

Molecular Weight (calculated)

97656.4 Da

IEP (calculated)

8.430

GRAVY (calculated)

-0.304

Length

864 amino acids

Sequence
(BLAST)

001: MIDQTHMEYF REHMSDEEKI AAQESLKATY RPPIEFYLFF QRRAIKNPLF LQRSLKYKTE AKRQRSKDAA GVETQELFPL FIMLARLVSS KTTAKSSSAI
101: YKFSRACILT GDDGVSQPQA NFLLPRMDRL ALDAKSGSLV ILFISFAGAQ NSQSGIDSSK IHSGNIGGHC LWSKIPLESL YSSWKEYPNM DLGEKATSVS
201: LVEMQPCFLQ LMSMSEKFVE IQVPSNPLTS SSPQQVQVTI SAQEVGATEN PPYRSSFSFS DFPASSVVLP IHRLRKGQVA FNYSYYNNKL QKTEVTGDFT
301: CPLCKVKCAS FKGLECHIAT HDFFNFEFWV NEKYPAVNVS LNEVTLTETS KCFKKEKKGD PNARLEPYPF SSMKSSRRKQ KTPARNPWPR PIKTDDAADS
401: VKCEKSQTVP PGMGPADLQM MNMWNSFMKK HRVITGGCIA CGCEAFSKLH GPFLVRNLDL LCCSRWIDQM HNEYFCAHMS EEEKIAAEES FKAYINPTEL
501: YMKLQDRAKK NPLFLQRSLS YKIEAKHQRR IQMTVSLSDS IETQKLFPLY VFLARLVSPE PTAEYSAVYK FSRTCSIPGG VDGKANFLLP EMDRLALKAG
601: SVDLLFISFA GEQNFDSSKI RSGNIGGHCF LSKIPLETLY SSWKKYPNMG LGERATSVSL VEMQPYFLQL KCIMSEQCVE IQVPRNPLTS SSPQQVQVTI
701: SAQEVGATEN PPYRSSFSFN DFPASSGLEC HMPSTHDLFN FEFWVNEKYP AVNVSLKSEV TFTEVNAADS VKCEKSQTVP PGMGPADLQM MNMWNSFMKK
801: HRVITGGCIA CGCEAFSKLH GPFLVRNLDL LWCWKKYIWT LKIYGRLDAQ TLNNCMVLFE QLAN

Best Arabidopsis Sequence Match ( AT5G51230.1 )
(BLAST)

001: MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAGVQTQK
101: LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK
201: IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR
301: TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SSKKFRRRRQ
401: KSQVRSSRQG PHLGLGCEVL DKTDDAHSVR SEKSRIPPGK HYERIGGAES GQRVPPGTSP ADVQSCGDPD YVQSIAGSTM LQFAKTRKIS IERSDLRNRS
501: LLQKRQFFHS HRAQPMALEQ VLSDRDSEDE VDDDVADFED RRMLDDFVDV TKDEKQMMHM WNSFVRKQRV LADGHIPWAC EAFSRLHGPI MVRTPHLIWC
601: WRVFMVKLWN HGLLDARTMN NCNTFLEQLQ I

Arabidopsis Description

EMF2Polycomb group protein EMBRYONIC FLOWER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Y4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.