Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra032169.1-P | |
| Bra032592.1-P | |
| Bra033334.1-P | |
| Bra036300.1-P |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31712 | Canola | nucleus | 95.78 | 65.04 |
| Bra005262.1-P | Field mustard | mitochondrion | 57.81 | 35.86 |
| GSMUA_Achr2P11140_001 | Banana | cytosol | 16.03 | 34.23 |
| TraesCSU01G224600.1 | Wheat | nucleus | 16.03 | 30.65 |
| TraesCSU01G194400.1 | Wheat | nucleus | 16.03 | 30.65 |
| Bra040097.1-P | Field mustard | nucleus | 38.82 | 19.78 |
| Bra021078.1-P | Field mustard | nucleus | 35.02 | 19.53 |
| KRH77315 | Soybean | nucleus | 27.85 | 15.42 |
| Bra015201.1-P | Field mustard | cytosol | 21.94 | 15.12 |
| KRH28171 | Soybean | nucleus | 27.0 | 15.06 |
| TraesCS4D01G183300.1 | Wheat | nucleus | 6.33 | 11.72 |
| TraesCS5D01G388900.1 | Wheat | nucleus | 5.91 | 10.94 |
| AT2G35670.1 | Thale cress | nucleus | 34.6 | 10.86 |
| Os09t0306800-01 | Rice | cytosol, nucleus | 27.43 | 10.73 |
| KXG37542 | Sorghum | nucleus | 26.58 | 10.48 |
| OQU89244 | Sorghum | nucleus | 27.0 | 10.21 |
| TraesCS2B01G023900.1 | Wheat | cytosol | 25.74 | 10.17 |
| TraesCS2D01G000600.1 | Wheat | cytosol | 25.32 | 9.95 |
| Os04t0162100-01 | Rice | nucleus | 26.16 | 9.94 |
| TraesCS2A01G000100.1 | Wheat | nucleus | 25.32 | 9.93 |
| HORVU2Hr1G000010.32 | Barley | nucleus | 25.32 | 9.9 |
| HORVU5Hr1G054730.1 | Barley | nucleus | 26.16 | 9.73 |
| TraesCS5D01G184200.2 | Wheat | nucleus | 26.16 | 9.72 |
| TraesCS5A01G179600.1 | Wheat | nucleus | 26.16 | 9.72 |
| Zm00001d034036_P003 | Maize | golgi | 24.89 | 9.69 |
| Bra022541.1-P | Field mustard | nucleus | 25.74 | 9.65 |
| Bra015200.1-P | Field mustard | nucleus, plastid | 25.74 | 9.65 |
| Zm00001d020036_P002 | Maize | nucleus | 27.43 | 9.49 |
| TraesCS5B01G177400.2 | Wheat | nucleus | 26.16 | 9.44 |
| TraesCS2A01G002500.1 | Wheat | nucleus | 25.74 | 9.41 |
| HORVU2Hr1G000390.20 | Barley | nucleus | 25.74 | 9.23 |
| TraesCS2B01G020400.3 | Wheat | nucleus | 24.89 | 9.19 |
| KXG25810 | Sorghum | nucleus | 21.1 | 8.25 |
| Bra029179.1-P | Field mustard | nucleus | 19.41 | 5.32 |
| TraesCS3B01G073800.1 | Wheat | nucleus | 5.06 | 4.69 |
Protein Annotations
| EnsemblPlants:Bra005316.1 | EnsemblPlants:Bra005316.1-P | EnsemblPlantsGene:Bra005316 | InterPro:Polycomb_protein_VEFS-Box | PANTHER:PTHR22597 | PANTHER:PTHR22597:SF8 |
| PFAM:PF09733 | SEG:seg | UniParc:UPI0002547D49 | UniProt:M4CM79 | MapMan:12.3.3.1.1.3 | MapMan:15.5.15 |
Description
AT2G35670 (E=1e-036) FIS2, FIE2 | FIS2 (FERTILIZATION INDEPENDENT SEED 2); transcription factor
Coordinates
chrA05:-:4777047..4779725
Molecular Weight (calculated)
27825.8 Da
IEP (calculated)
5.445
GRAVY (calculated)
-0.809
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVRPLTEE EKELISLYGK PITVYDILQA FSQDKLSENG HPNFDVSVKP DAFTNGVLTY DLEEHNRVNT YLYRTDIRSR QFYHSQTLQP MTLEEVLSDA
101: DSDNEDDQEF KDFQERMKID RLVDASDEEK RFMWLWNTFI RKQRVYADKH VPWACEEFVK LHAKELITPK LLWQWRMFAV DTLCLKYGLI CAKTMDKCST
201: RKSARTQKKK KQEAASSSKA NANGNEPQPM ELDEEQH
101: DSDNEDDQEF KDFQERMKID RLVDASDEEK RFMWLWNTFI RKQRVYADKH VPWACEEFVK LHAKELITPK LLWQWRMFAV DTLCLKYGLI CAKTMDKCST
201: RKSARTQKKK KQEAASSSKA NANGNEPQPM ELDEEQH
001: MARKSIRGKE VVMVSDDDDD DDDDVDDDKN IIKCVKPLTV YKNLETPTDS DDNDDDDDDD VDVDENIIKY IKPVAVYKKL ETRSKNNPYF LRRSLKYIIQ
101: AKKKKKSNSG GKIRFNYRDV SNKMTLKAEV VENFSCPFCL IPCGGHEGLQ LHLKSSHDAF KFEFYRAEKD HGPEVDVSVK SDTIKFGVLK DDVGNPQLSP
201: LTFCSKNRNQ RRQRDDSNNV KKLNVLLMEL DLDDLPRGTE NDSTHVNDDN VSSPPRAHSS EKISDILTTT QLAIAESSEP KVPHVNDGNV SSPPRAHSSA
301: EKNESTHVND DDDVSSPPRA HSLEKNESTH VNEDNISSPP KAHSSKKNES THMNDEDVSF PPRTRSSKET SDILTTTQPA IVEPSEPKVR RVSRRKQLYA
401: KRYKARETQP AIAESSEPKV LHVNDENVSS PPEAHSLEKA SDILTTTQPA IAESSEPKVP HVNDENVSST PRAHSSKKNK STRKNVDNVP SPPKTRSSKK
501: TSDILTTTQP TIAESSEPKV RHVNDDNVSS TPRAHSSKKN KSTRKNDDNI PSPPKTRSSK KTSNILATTQ PAKAEPSEPK VTRVSRRKEL HAERCEAKRL
601: ERLKGRQFYH SQTMQPITFE QVMSNEDSEN ETDDYALDIS ERLRLERLVG VSKEEKRYMY LWNIFVRKQR VIADGHVPWA CEEFAKLHKE EMKNSSSFDW
701: WWRMFRIKLW NNGLICAKTF HKCTTILLSN SDEAGQFTSG SAANANNQQS MEVDE
101: AKKKKKSNSG GKIRFNYRDV SNKMTLKAEV VENFSCPFCL IPCGGHEGLQ LHLKSSHDAF KFEFYRAEKD HGPEVDVSVK SDTIKFGVLK DDVGNPQLSP
201: LTFCSKNRNQ RRQRDDSNNV KKLNVLLMEL DLDDLPRGTE NDSTHVNDDN VSSPPRAHSS EKISDILTTT QLAIAESSEP KVPHVNDGNV SSPPRAHSSA
301: EKNESTHVND DDDVSSPPRA HSLEKNESTH VNEDNISSPP KAHSSKKNES THMNDEDVSF PPRTRSSKET SDILTTTQPA IVEPSEPKVR RVSRRKQLYA
401: KRYKARETQP AIAESSEPKV LHVNDENVSS PPEAHSLEKA SDILTTTQPA IAESSEPKVP HVNDENVSST PRAHSSKKNK STRKNVDNVP SPPKTRSSKK
501: TSDILTTTQP TIAESSEPKV RHVNDDNVSS TPRAHSSKKN KSTRKNDDNI PSPPKTRSSK KTSNILATTQ PAKAEPSEPK VTRVSRRKEL HAERCEAKRL
601: ERLKGRQFYH SQTMQPITFE QVMSNEDSEN ETDDYALDIS ERLRLERLVG VSKEEKRYMY LWNIFVRKQR VIADGHVPWA CEEFAKLHKE EMKNSSSFDW
701: WWRMFRIKLW NNGLICAKTF HKCTTILLSN SDEAGQFTSG SAANANNQQS MEVDE
Arabidopsis Description
FIS2Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2 [Source:UniProtKB/Swiss-Prot;Acc:P0DKJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.