Factsheet for VIT_00s1675g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G224600.1	Wheat	nucleus	75.81	75.81
TraesCSU01G194400.1	Wheat	nucleus	75.81	75.81
GSMUA_Achr2P11140_001	Banana	cytosol	57.26	63.96
VIT_02s0234g00050.t01	Wine grape	nucleus	100.0	32.89
Os09t0306800-01	Rice	cytosol, nucleus	81.45	16.67
KXG37542	Sorghum	nucleus	76.61	15.81
Zm00001d034036_P003	Maize	golgi	76.61	15.6
OQU89244	Sorghum	nucleus	76.61	15.15
VIT_16s0013g00860.t01	Wine grape	nucleus	80.65	15.11
TraesCS2B01G023900.1	Wheat	cytosol	72.58	15.0
TraesCS2D01G000600.1	Wheat	cytosol	72.58	14.93
HORVU5Hr1G054730.1	Barley	nucleus	76.61	14.91
TraesCS2A01G000100.1	Wheat	nucleus	72.58	14.9
HORVU2Hr1G000010.32	Barley	nucleus	71.77	14.69
TraesCS5A01G179600.1	Wheat	nucleus	74.19	14.42
KRG90126	Soybean	nucleus	70.16	14.31
KRH33365	Soybean	nucleus	70.16	14.31
TraesCS5B01G177400.2	Wheat	nucleus	75.81	14.31
TraesCS5D01G184200.2	Wheat	nucleus	73.39	14.26
Os04t0162100-01	Rice	nucleus	68.55	13.62
Zm00001d020036_P002	Maize	nucleus	75.0	13.58
KXG25810	Sorghum	nucleus	62.9	12.87
TraesCS2B01G020400.3	Wheat	nucleus	63.71	12.31
HORVU2Hr1G000390.20	Barley	nucleus	64.52	12.1
TraesCS2A01G002500.1	Wheat	nucleus	62.9	12.04
TraesCS4D01G183300.1	Wheat	nucleus	6.45	6.25
TraesCS5D01G388900.1	Wheat	nucleus	5.65	5.47
KRH34601	Soybean	nucleus	32.26	5.1
VIT_02s0234g00020.t01	Wine grape	cytosol, extracellular, nucleus	7.26	3.88
TraesCS3B01G073800.1	Wheat	nucleus	0.81	0.39

Protein Annotations

MapMan:12.3.3.1.1.3	MapMan:15.5.15	ProteinID:CCB61142	ProteinID:CCB61142.1	UniProt:F6I2H5	EMBL:FN596630
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0031490	PFAM:PF09733	PANTHER:PTHR22597
PANTHER:PTHR22597:SF8	InterPro:Polycomb_protein_VEFS-Box	UniParc:UPI0001986112	ArrayExpress:VIT_00s1675g00010	EnsemblPlantsGene:VIT_00s1675g00010	EnsemblPlants:VIT_00s1675g00010.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:40119519..40122670

Molecular Weight (calculated)

14612.3 Da

IEP (calculated)

4.457

GRAVY (calculated)

-0.415

Length

124 amino acids

Sequence
(BLAST)

001: MALDQVLSDR DSEDEVDDDI ADFEDRRMLD DFVDVTKDEK QFMHLWNSFV RKQRVLADGH IPWACEAFSK LHGQELVQAP AIFWCWRLFM IKLWNHGLLD
101: ARTMNSCNLV LEGYRNEVSD TMKS

Best Arabidopsis Sequence Match ( AT5G51230.3 )
(BLAST)

001: MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAGVQTQK
101: LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK
201: IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR
301: TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SRRRQKSQVR
401: SSRQGPHLGL GCEVLDKTDD AHSVRSEKSR IPPGKHYERI GGAESGQRVP PGTSPADVQS CGDPDYVQSI AGSTMLQFAK TRKISIERSD LRNRSLLQKR
501: QFFHSHRAQP MALEQVLSDR DSEDEVDDDV ADFEDRRMLD DFVDVTKDEK QMMHMWNSFV RKQRVLADGH IPWACEAFSR LHGPIMVRTP HLIWCWRVFM
601: VKLWNHGLLD ARTMNNCNTF LEQLQI

Arabidopsis Description

EMF2Polycomb group protein EMBRYONIC FLOWER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Y4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.