Factsheet for AT5G51230.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015200.1-P	Field mustard	nucleus, plastid	89.7	89.56
CDY00460	Canola	nucleus, plastid	89.7	89.56
CDX99960	Canola	nucleus	88.27	88.13
CDX91573	Canola	nucleus	82.25	82.38
Bra022541.1-P	Field mustard	nucleus	81.62	81.49
CDY16330	Canola	nucleus	81.62	81.49
TraesCSU01G194400.1	Wheat	nucleus	14.1	71.77
TraesCSU01G224600.1	Wheat	nucleus	14.1	71.77
GSMUA_Achr2P11140_001	Banana	cytosol	11.57	65.77
VIT_16s0013g00860.t01	Wine grape	nucleus	64.18	61.18
Solyc03g093640.2.1	Tomato	nucleus	57.84	57.21
KRH33365	Soybean	nucleus	53.72	55.76
KRG90126	Soybean	nucleus	53.25	55.26
Os09t0306800-01	Rice	cytosol, nucleus	48.97	50.99
KXG37542	Sorghum	nucleus	48.18	50.58
TraesCS2A01G000100.1	Wheat	nucleus	47.07	49.17
TraesCS2B01G023900.1	Wheat	cytosol	46.75	49.17
TraesCS2D01G000600.1	Wheat	cytosol	46.91	49.09
HORVU5Hr1G054730.1	Barley	nucleus	49.45	48.98
TraesCS5D01G184200.2	Wheat	nucleus	49.29	48.75
TraesCS5A01G179600.1	Wheat	nucleus	49.29	48.75
OQU89244	Sorghum	nucleus	48.18	48.48
HORVU2Hr1G000010.32	Barley	nucleus	45.96	47.85
TraesCS5B01G177400.2	Wheat	nucleus	49.13	47.18
Zm00001d034036_P003	Maize	golgi	45.17	46.8
Zm00001d020036_P002	Maize	nucleus	48.18	44.38
Os04t0162100-01	Rice	nucleus	41.2	41.67
TraesCS2A01G002500.1	Wheat	nucleus	42.63	41.51
TraesCS2B01G020400.3	Wheat	nucleus	42.0	41.28
HORVU2Hr1G000390.20	Barley	nucleus	40.73	38.88
AT4G16845.1	Thale cress	nucleus	27.1	38.86
KXG25810	Sorghum	nucleus	37.24	38.78
TraesCS3B01G073800.1	Wheat	nucleus	15.53	38.28
TraesCS4D01G183300.1	Wheat	nucleus	6.97	34.38
TraesCS5D01G388900.1	Wheat	nucleus	6.81	33.59
KRH34601	Soybean	nucleus	29.64	23.85
AT4G16810.1	Thale cress	nucleus	8.87	18.67
AT2G35670.1	Thale cress	nucleus	16.96	14.17

Protein Annotations

MapMan:12.3.3.1.1.3	MapMan:15.5.15	EntrezGene:835198	UniProt:A0A178UM24	EMBL:AB053171	ProteinID:AED96055.1
ProteinID:AED96056.1	ProteinID:AED96057.1	ArrayExpress:AT5G51230	EnsemblPlantsGene:AT5G51230	RefSeq:AT5G51230	TAIR:AT5G51230
RefSeq:AT5G51230-TAIR-G	EnsemblPlants:AT5G51230.1	TAIR:AT5G51230.1	EMBL:AY140086	ProteinID:BAA97386.1	ProteinID:BAA97387.1
ProteinID:BAB58957.1	EMBL:BT008388	Symbol:EMF2	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003682	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006325	GO:GO:0006349
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009791	GO:GO:0009908	GO:GO:0009910	GO:GO:0009987	GO:GO:0016043	GO:GO:0030154
GO:GO:0031490	GO:GO:0040029	GO:GO:0046872	RefSeq:NP_001119413.1	RefSeq:NP_199936.2	RefSeq:NP_851168.1
ProteinID:OAO94074.1	PFAM:PF09733	PO:PO:0000013	PO:PO:0000017	PO:PO:0000037	PO:PO:0000229
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020038	PO:PO:0020094
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR22597	PANTHER:PTHR22597:SF0
InterPro:Polycomb_protein_VEFS-Box	UniProt:Q8L6Y4	UniParc:UPI00000A0F36	SEG:seg	:	:

Description

EMF2Polycomb group protein EMBRYONIC FLOWER 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Y4]

Coordinates

chr5:+:20823644..20829644

Molecular Weight (calculated)

71684.7 Da

IEP (calculated)

8.243

GRAVY (calculated)

-0.391

Length

631 amino acids

Sequence
(BLAST)

001: MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAGVQTQK
101: LFPLYILLAR LVSPKPVAEY SAVYRFSRAC ILTGGLGVDG VSQAQANFLL PDMNRLALEA KSGSLAILFI SFAGAQNSQF GIDSGKIHSG NIGGHCLWSK
201: IPLQSLYASW QKSPNMDLGQ RVDTVSLVEM QPCFIKLKSM SEEKCVSIQV PSNPLTSSSP QQVQVTISAE EVGSTEKSPY SSFSYNDISS SSLLQIIRLR
301: TGNVVFNYRY YNNKLQKTEV TEDFSCPFCL VKCASFKGLR YHLPSTHDLL NFEFWVTEEF QAVNVSLKTE TMISKVNEDD VDPKQQTFFF SSKKFRRRRQ
401: KSQVRSSRQG PHLGLGCEVL DKTDDAHSVR SEKSRIPPGK HYERIGGAES GQRVPPGTSP ADVQSCGDPD YVQSIAGSTM LQFAKTRKIS IERSDLRNRS
501: LLQKRQFFHS HRAQPMALEQ VLSDRDSEDE VDDDVADFED RRMLDDFVDV TKDEKQMMHM WNSFVRKQRV LADGHIPWAC EAFSRLHGPI MVRTPHLIWC
601: WRVFMVKLWN HGLLDARTMN NCNTFLEQLQ I

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.