Factsheet for TraesCS1A01G019600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G023600.1	Wheat	golgi	88.84	88.49
TraesCS1D01G019200.1	Wheat	golgi	87.05	87.58
HORVU3Hr1G110110.2	Barley	golgi	84.46	83.3
TraesCS1B01G023300.1	Wheat	golgi	86.85	80.44
TraesCS1A01G019500.1	Wheat	golgi	70.32	75.75
TraesCS7A01G155400.1	Wheat	golgi	57.37	63.02
GSMUA_AchrUn_...	Banana	cytosol	22.51	46.89
GSMUA_Achr3P05010_001	Banana	plastid	42.03	45.97
GSMUA_Achr10P...	Banana	plastid	13.74	45.39
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	39.04	42.7
VIT_16s0039g02230.t01	Wine grape	plastid	35.26	38.82
VIT_11s0052g01600.t01	Wine grape	plastid	35.26	38.56
CDX85476	Canola	plastid	34.86	38.21
VIT_06s0009g01960.t01	Wine grape	plastid	34.26	38.14
Bra023594.1-P	Field mustard	plastid	34.86	38.13
CDY02736	Canola	plastid	34.86	38.04
VIT_06s0009g02010.t01	Wine grape	plastid	33.27	37.53
VIT_06s0009g01990.t01	Wine grape	plastid	33.27	37.53
AT5G17050.1	Thale cress	plastid	34.26	37.39
AT5G17040.1	Thale cress	plastid	32.47	36.88
AT5G17030.1	Thale cress	plastid	33.67	36.82
KRH02903	Soybean	cytosol	2.99	36.59
VIT_11s0052g01630.t01	Wine grape	plastid	34.46	36.04
AT1G30530.1	Thale cress	plastid	32.47	35.98
KRH10620	Soybean	golgi	29.88	35.71
KRH55397	Soybean	extracellular, golgi	22.91	34.23
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	30.48	34.0
KRH49848	Soybean	golgi, plastid	30.48	34.0
KRG88587	Soybean	extracellular, golgi	24.3	33.8
VIT_11s0052g01580.t01	Wine grape	cytosol	35.06	33.78
VIT_06s0009g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	30.68	33.7
KRH21732	Soybean	golgi	30.88	33.55
PGSC0003DMT400070649	Potato	extracellular, golgi	30.08	33.48
KRH42070	Soybean	golgi	29.68	33.33
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	11.75	33.33
Solyc10g083440.1.1	Tomato	extracellular, golgi	29.48	33.11
KRH49847	Soybean	nucleus	29.28	32.89
KRH49849	Soybean	golgi, plastid	29.08	32.66
KRH18985	Soybean	cytosol	24.9	25.56

Protein Annotations

EnsemblPlants:TraesCS1A01G019600.1	EnsemblPlantsGene:TraesCS1A01G019600	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016758	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS	PANTHER:PTHR11926
PANTHER:PTHR11926:SF336	PFAM:PF00201	ScanProsite:PS00375	SEG:seg	SUPFAM:SSF53756	MapMan:9.2.2.6.2

Description

No Description!

Coordinates

chr1A:-:9787090..9788709

Molecular Weight (calculated)

52336.7 Da

IEP (calculated)

5.511

GRAVY (calculated)

0.243

Length

502 amino acids

Sequence
(BLAST)

001: MAAVPHVVVI TFPFASHAVK LFRLARALAA AAPAATFSFL STAGSIAQLQ EKNQDALEAN LRFVEVPDGL TLLPPSSGGA GPAAPPNHMA RLGLFLAAAE
101: AGGVGVALET ARLAAGGARV TCVVGDAFVW MAAEAAAAVG APWVPVWTGG PSALLAHLQG DALRDDIGDK AASRADELLT SHPGLGSYRV RDLPDGCVFG
201: EMHLPIVALF RRVAEQLHVP RAATAVALNT FPGLLPDDVT AALATELPEV LPIGPFHLLP VPGDDDNAAA ADPHGCLAWL DGHPARAVAY ASFGTVVTAV
301: VGGQEELREL AAGLEASGAP FLWSLPKEYW PLLPAGFLNL ERAKVVPWAP QAAVLRHASV GGFVTHAGWA SVLEGVAGGV PMACRPFFSD QRMNARMVAH
401: VWGFGTVFEQ PMTRETVVEA VSSLLAGDKG TRMQEMRDMA ATAFASDGGS RKNLDKLLNI VCTSSQEHRR DDLHVDEAAE VTRCAPAHDL LAATSLAHTV
501: AD

Best Arabidopsis Sequence Match ( AT1G30530.1 )
(BLAST)

001: MTKFSEPIRD SHVAVLAFFP VGAHAGPLLA VTRRLAAASP STIFSFFNTA RSNASLFSSD HPENIKVHDV SDGVPEGTML GNPLEMVELF LEAAPRIFRS
101: EIAAAEIEVG KKVTCMLTDA FFWFAADIAA ELNATWVAFW AGGANSLCAH LYTDLIRETI GLKDVSMEET LGFIPGMENY RVKDIPEEVV FEDLDSVFPK
201: ALYQMSLALP RASAVFISSF EELEPTLNYN LRSKLKRFLN IAPLTLLSST SEKEMRDPHG CFAWMGKRSA ASVAYISFGT VMEPPPEELV AIAQGLESSK
301: VPFVWSLKEK NMVHLPKGFL DRTREQGIVV PWAPQVELLK HEAMGVNVTH CGWNSVLESV SAGVPMIGRP ILADNRLNGR AVEVVWKVGV MMDNGVFTKE
401: GFEKCLNDVF VHDDGKTMKA NAKKLKEKLQ EDFSMKGSSL ENFKILLDEI VKV

Arabidopsis Description

UGT78D1Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.