Factsheet for VIT_11s0052g01600.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01630.t01	Wine grape	plastid	88.45	84.58
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	29.41	76.27
VIT_06s0009g01960.t01	Wine grape	plastid	60.13	61.2
VIT_06s0009g01990.t01	Wine grape	plastid	54.9	56.63
VIT_06s0009g02010.t01	Wine grape	plastid	54.9	56.63
VIT_06s0009g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	55.12	55.36
VIT_11s0052g01580.t01	Wine grape	cytosol	62.31	54.89
GSMUA_AchrUn_...	Banana	cytosol	27.45	52.28
VIT_16s0039g02230.t01	Wine grape	plastid	51.85	52.19
CDX85476	Canola	plastid	50.54	50.66
Bra023594.1-P	Field mustard	plastid	50.54	50.54
CDY02736	Canola	plastid	50.11	50.0
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	49.02	50.0
PGSC0003DMT400070649	Potato	extracellular, golgi	48.15	49.0
Solyc10g083440.1.1	Tomato	extracellular, golgi	47.71	48.99
AT5G17050.1	Thale cress	plastid	49.02	48.91
KRH02903	Soybean	cytosol	4.36	48.78
AT5G17030.1	Thale cress	plastid	47.49	47.49
AT5G17040.1	Thale cress	plastid	44.88	46.61
AT1G30530.1	Thale cress	plastid	43.36	43.93
GSMUA_Achr3P05010_001	Banana	plastid	43.79	43.79
GSMUA_Achr10P...	Banana	plastid	14.38	43.42
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	43.36	43.36
Os06t0192100-00	Rice	cytosol	37.25	43.29
TraesCS7D01G155700.1	Wheat	golgi	40.3	40.48
TraesCS7B01G059500.1	Wheat	golgi	40.3	40.48
EER87993	Sorghum	plastid	41.39	40.25
TraesCS7A01G155400.1	Wheat	golgi	39.65	39.82
HORVU7Hr1G031800.2	Barley	golgi, peroxisome, plastid	40.96	39.09
Os07t0148200-01	Rice	plastid	40.3	38.78
EER99683	Sorghum	plastid	37.69	38.44
TraesCS1A01G019500.1	Wheat	golgi	37.91	37.34
TraesCS1D01G019100.1	Wheat	golgi	37.47	36.99
Zm00001d045055_P001	Maize	peroxisome, plastid	40.52	36.76
TraesCS1D01G019200.1	Wheat	golgi	38.78	35.67
Zm00001d006683_P001	Maize	plastid	36.82	35.65
TraesCS1A01G019600.1	Wheat	golgi	38.56	35.26
HORVU3Hr1G110110.2	Barley	golgi	38.34	34.58
KRH18985	Soybean	cytosol	36.82	34.56
TraesCS1B01G023600.1	Wheat	golgi	37.25	33.93
TraesCS1B01G049600.1	Wheat	golgi	22.88	32.61
TraesCS1B01G023300.1	Wheat	golgi	38.13	32.29
TraesCS1B01G023700.1	Wheat	golgi	11.55	30.99

Protein Annotations

EntrezGene:100247914	wikigene:100247914	Gene3D:3.40.50.2000	MapMan:9.2.2.6.2	EMBL:AB499074	EMBL:AM468889
ProteinID:BAI22846	ProteinID:BAI22846.1	ProteinID:CAN74919	ProteinID:CAN74919.1	ProteinID:CBI17776	ProteinID:CBI17776.3
UniProt:D7SQ45	EMBL:FN594964	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758
GO:GO:0043231	GO:GO:0080043	GO:GO:0080044	EntrezGene:LOC100247914	wikigene:LOC100247914	PFAM:PF00201
ScanProsite:PS00375	PANTHER:PTHR11926	PANTHER:PTHR11926:SF418	SUPFAM:SSF53756	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS
UniParc:UPI0001984428	ArrayExpress:VIT_11s0052g01600	EnsemblPlantsGene:VIT_11s0052g01600	EnsemblPlants:VIT_11s0052g01600.t01	unigene:Vvi.13900	RefSeq:XP_002271025
RefSeq:XP_002271025.1	SEG:seg	:	:	:	:

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:D7SQ45]

Coordinates

chr11:-:19328482..19331601

Molecular Weight (calculated)

49687.3 Da

IEP (calculated)

6.652

GRAVY (calculated)

0.117

Length

459 amino acids

Sequence
(BLAST)

001: MTTTASSMDR HVAVLGFPTH TATLLKLLRR LASAAPTTIF SFFNTPKANS SISSAQSPHG IHNLRVYDVA DGVPEDLVLS ANPLARIEMF LKATPGNFRD
101: ALEVAEKDIG RKISCLVSDV FLWFTADMAE EMGVPWVAIR TAALYSLSVH IYTDAIREAV GVAGQVQDQT LDFIPGFSAI KVEDLPEGMV FGDTESPFAC
201: MLHKMGLMLP RATIVATNSF EELEPTIVTN DLKSKLQKVL TVGPFDLSSP PPLILDASGC LPWLDNKKEA SVAYVSFGSI ATPPPNEIVA LAEALEATGI
301: PFLWSLREHA MNNLPKGFLE RTTAHGKVVS WAPQPQVLAH ASVAVFITHS GWNSVTESIV GGVPMICRPF FGDQRLNRRM VQDVWGIGIG VEGGILTKRG
401: VMSALGLILS HEGKKMREKI GVLKELARRA VEPNGSSTQN LGHLLEVITT SKLPLDTNK

Best Arabidopsis Sequence Match ( AT5G17050.1 )
(BLAST)

001: MTKPSDPTRD SHVAVLAFPF GTHAAPLLTV TRRLASASPS TVFSFFNTAQ SNSSLFSSGD EADRPANIRV YDIADGVPEG YVFSGRPQEA IELFLQAAPE
101: NFRREIAKAE TEVGTEVKCL MTDAFFWFAA DMATEINASW IAFWTAGANS LSAHLYTDLI RETIGVKEVG ERMEETIGVI SGMEKIRVKD TPEGVVFGNL
201: DSVFSKMLHQ MGLALPRATA VFINSFEDLD PTLTNNLRSR FKRYLNIGPL GLLSSTLQQL VQDPHGCLAW MEKRSSGSVA YISFGTVMTP PPGELAAIAE
301: GLESSKVPFV WSLKEKSLVQ LPKGFLDRTR EQGIVVPWAP QVELLKHEAT GVFVTHCGWN SVLESVSGGV PMICRPFFGD QRLNGRAVEV VWEIGMTIIN
401: GVFTKDGFEK CLDKVLVQDD GKKMKCNAKK LKELAYEAVS SKGRSSENFR GLLDAVVNII

Arabidopsis Description

UGT78D2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.