Factsheet for VIT_11s0052g01580.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
endoplasmic reticulum 1
mitochondrion 2
plasma membrane 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01600.t01	Wine grape	plastid	54.89	62.31
VIT_06s0009g01960.t01	Wine grape	plastid	53.74	62.08
VIT_06s0009g01990.t01	Wine grape	plastid	51.82	60.67
VIT_11s0052g01630.t01	Wine grape	plastid	55.66	60.42
VIT_06s0009g02010.t01	Wine grape	plastid	51.44	60.22
VIT_06s0009g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	49.33	56.24
VIT_16s0039g02230.t01	Wine grape	plastid	48.56	55.48
GSMUA_AchrUn_...	Banana	cytosol	24.95	53.94
CDX85476	Canola	plastid	47.41	53.93
Bra023594.1-P	Field mustard	plastid	47.41	53.81
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	18.04	53.11
CDY02736	Canola	plastid	46.83	53.04
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	45.68	52.89
AT5G17050.1	Thale cress	plastid	46.45	52.61
PGSC0003DMT400070649	Potato	extracellular, golgi	45.3	52.33
AT5G17030.1	Thale cress	plastid	43.76	49.67
Solyc10g083440.1.1	Tomato	extracellular, golgi	42.23	49.22
AT5G17040.1	Thale cress	plastid	41.65	49.09
AT1G30530.1	Thale cress	plastid	42.03	48.34
KRH02903	Soybean	cytosol	3.65	46.34
GSMUA_Achr10P...	Banana	plastid	13.05	44.74
GSMUA_Achr3P05010_001	Banana	plastid	39.35	44.66
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	39.16	44.44
Os06t0192100-00	Rice	cytosol	30.52	40.25
TraesCS7B01G059500.1	Wheat	golgi	34.36	39.17
TraesCS7A01G155400.1	Wheat	golgi	33.97	38.73
TraesCS7D01G155700.1	Wheat	golgi	33.97	38.73
EER87993	Sorghum	plastid	34.93	38.56
EER99683	Sorghum	plastid	32.63	37.78
TraesCS1D01G019100.1	Wheat	golgi	33.4	37.42
TraesCS1A01G019500.1	Wheat	golgi	33.4	37.34
HORVU7Hr1G031800.2	Barley	golgi, peroxisome, plastid	33.97	36.8
Zm00001d045055_P001	Maize	peroxisome, plastid	35.51	36.56
Os07t0148200-01	Rice	plastid	33.21	36.27
KRH18985	Soybean	cytosol	33.4	35.58
TraesCS1D01G019200.1	Wheat	golgi	33.78	35.27
TraesCS1A01G019600.1	Wheat	golgi	33.78	35.06
TraesCS1B01G023600.1	Wheat	golgi	33.21	34.33
Zm00001d006683_P001	Maize	plastid	30.9	33.97
HORVU3Hr1G110110.2	Barley	golgi	32.82	33.6
TraesCS1B01G049600.1	Wheat	golgi	20.54	33.23
TraesCS1B01G023300.1	Wheat	golgi	32.82	31.55
TraesCS1B01G023700.1	Wheat	golgi	10.17	30.99

Protein Annotations

EntrezGene:100258170	wikigene:100258170	Gene3D:3.40.50.2000	MapMan:9.2.2.6.2	ProteinID:CCB44602	ProteinID:CCB44602.1
UniProt:F6GXB6	EMBL:FN594964	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758
GO:GO:0043231	GO:GO:0080043	GO:GO:0080044	EntrezGene:LOC100258170	wikigene:LOC100258170	PFAM:PF00201
ScanProsite:PS00375	PANTHER:PTHR11926	PANTHER:PTHR11926:SF418	SUPFAM:SSF53756	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS
UniParc:UPI0001984427	ArrayExpress:VIT_11s0052g01580	EnsemblPlantsGene:VIT_11s0052g01580	EnsemblPlants:VIT_11s0052g01580.t01	unigene:Vvi.20867	RefSeq:XP_002270947
RefSeq:XP_002270947.1	SEG:seg	:	:	:	:

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F6GXB6]

Coordinates

chr11:-:19310627..19313103

Molecular Weight (calculated)

56886.6 Da

IEP (calculated)

7.405

GRAVY (calculated)

0.042

Length

521 amino acids

Sequence
(BLAST)

001: MVKKNYCKSV DDSWPQPYTT FSNCGYVSSL KLSIVQSSRL WTRIIAIVVH NGKTVTSKHL HLQKFASLTS MSQHVAVFAF PFATHAAPLL SLVRRLARAV
101: PRARFSFFNT AKSNGLIFSG PKDDVDDNIK AYNVADGMPE GHVLSGNPQE GIELFLKVTP GNFREVVEVA EGESGMRISC LLTDAFLWFA GEMAEDRCIP
201: WVPLWTSGPV SLAVHVYTDD IRKMVLGANG IEGHEVQTLD FIPGLSSIHA VDLPEEIVSG SLDSPFSQML HKMGLTLPRA AAVVINSFEE MEPTVVNNLK
301: SKFKKFVNVG PFTLSSPPPL APDSNSCLLW LDRQKAASVA YISFGTIITP PPHELVALAE ALESTGVPFL WSLRDNSKDN LPKGFLERTS QNGKVVPWAP
401: QLQVLGHASV GVFVTHCGWN SVTESIVCGV PMICRPFFGD QNLNRRMVQD VWGIGVGVKG GVFTKSGLTR DLELILAHEG KKMREKIGVL KELATEAVES
501: NGSSTKNFST LLEVVSHVAA N

Best Arabidopsis Sequence Match ( AT5G17050.1 )
(BLAST)

001: MTKPSDPTRD SHVAVLAFPF GTHAAPLLTV TRRLASASPS TVFSFFNTAQ SNSSLFSSGD EADRPANIRV YDIADGVPEG YVFSGRPQEA IELFLQAAPE
101: NFRREIAKAE TEVGTEVKCL MTDAFFWFAA DMATEINASW IAFWTAGANS LSAHLYTDLI RETIGVKEVG ERMEETIGVI SGMEKIRVKD TPEGVVFGNL
201: DSVFSKMLHQ MGLALPRATA VFINSFEDLD PTLTNNLRSR FKRYLNIGPL GLLSSTLQQL VQDPHGCLAW MEKRSSGSVA YISFGTVMTP PPGELAAIAE
301: GLESSKVPFV WSLKEKSLVQ LPKGFLDRTR EQGIVVPWAP QVELLKHEAT GVFVTHCGWN SVLESVSGGV PMICRPFFGD QRLNGRAVEV VWEIGMTIIN
401: GVFTKDGFEK CLDKVLVQDD GKKMKCNAKK LKELAYEAVS SKGRSSENFR GLLDAVVNII

Arabidopsis Description

UGT78D2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.