Factsheet for VIT_06s0009g02000.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

plastid 3
cytosol 1
plasma membrane 1
nucleus 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g01960.t01	Wine grape	plastid	88.4	89.58
VIT_06s0009g01990.t01	Wine grape	plastid	64.33	66.07
VIT_06s0009g02010.t01	Wine grape	plastid	64.33	66.07
VIT_11s0052g01600.t01	Wine grape	plastid	55.36	55.12
VIT_11s0052g01630.t01	Wine grape	plastid	55.8	53.12
GSMUA_AchrUn_...	Banana	cytosol	26.04	49.38
VIT_16s0039g02230.t01	Wine grape	plastid	49.23	49.34
VIT_11s0052g01580.t01	Wine grape	cytosol	56.24	49.33
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	46.83	47.56
PGSC0003DMT400070649	Potato	extracellular, golgi	45.95	46.56
CDX85476	Canola	plastid	44.42	44.32
CDY02736	Canola	plastid	44.42	44.13
Bra023594.1-P	Field mustard	plastid	44.2	44.01
AT5G17050.1	Thale cress	plastid	43.54	43.26
AT1G30530.1	Thale cress	plastid	41.58	41.94
AT5G17040.1	Thale cress	plastid	40.48	41.86
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	16.19	41.81
Solyc10g083440.1.1	Tomato	extracellular, golgi	40.26	41.16
GSMUA_Achr10P...	Banana	plastid	13.57	40.79
AT5G17030.1	Thale cress	plastid	40.7	40.52
Os06t0192100-00	Rice	cytosol	34.35	39.75
GSMUA_Achr3P05010_001	Banana	plastid	39.82	39.65
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	37.42	37.25
EER87993	Sorghum	plastid	36.32	35.17
TraesCS7B01G059500.1	Wheat	golgi	35.01	35.01
TraesCS7D01G155700.1	Wheat	golgi	34.79	34.79
EER99683	Sorghum	plastid	33.92	34.44
TraesCS7A01G155400.1	Wheat	golgi	34.35	34.35
Os07t0148200-01	Rice	plastid	35.45	33.96
HORVU7Hr1G031800.2	Barley	golgi, peroxisome, plastid	35.01	33.26
Zm00001d006683_P001	Maize	plastid	33.7	32.49
Zm00001d045055_P001	Maize	peroxisome, plastid	35.89	32.41
TraesCS1D01G019100.1	Wheat	golgi	32.6	32.04
TraesCS1D01G019200.1	Wheat	golgi	34.57	31.66
TraesCS1A01G019500.1	Wheat	golgi	31.73	31.12
HORVU3Hr1G110110.2	Barley	golgi	34.57	31.04
TraesCS1A01G019600.1	Wheat	golgi	33.7	30.68
TraesCS1B01G023600.1	Wheat	golgi	33.04	29.96
TraesCS1B01G049600.1	Wheat	golgi	20.79	29.5
KRH18985	Soybean	cytosol	29.98	28.02
TraesCS1B01G023300.1	Wheat	golgi	32.82	27.68
TraesCS1B01G023700.1	Wheat	golgi	7.66	20.47
KRH02903	Soybean	cytosol	0.22	2.44

Protein Annotations

Gene3D:3.40.50.2000	MapMan:9.2.2.6.2	ProteinID:CCB49128	ProteinID:CCB49128.1	UniProt:F6HAG8	EMBL:FN595504
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758	GO:GO:0043231	GO:GO:0080043
GO:GO:0080044	PFAM:PF00201	ScanProsite:PS00375	PANTHER:PTHR11926	PANTHER:PTHR11926:SF418	SUPFAM:SSF53756
InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS	UniParc:UPI0002109DE3	ArrayExpress:VIT_06s0009g02000	EnsemblPlantsGene:VIT_06s0009g02000	EnsemblPlants:VIT_06s0009g02000.t01
SEG:seg	:	:	:	:	:

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F6HAG8]

Coordinates

chr6:+:14217726..14226707

Molecular Weight (calculated)

49495.5 Da

IEP (calculated)

6.852

GRAVY (calculated)

-0.114

Length

457 amino acids

Sequence
(BLAST)

001: MAHFRKTSRM EKSRELQTKD GDKSTKFFHK IVNAHKTRNG IQESSTANSN AFLFSTQSAD GLNNVKPYDV VDGVPEGHVL SGNSEEVVGF FLKGAVGNFR
101: QAMEVAVADT ARKISCLVTD AFLWFGADMA EEMGVPWVPF WIAGLSALSV PFHTDAIRQK IGLNGHEDQT LDFIPGLSAM RVRDLPEGIV SGDLDSAPSR
201: MLHKMGLLLP RATAVIANSV EELNPIVATD LKSKLPKLLC LAPPTPSSQP ASNPDTSSCL SWLDKQKAKT VAYISFGTIL SPSPDELVAL TEALEATGVP
301: FLWSIKDNAK KNLPKGFLEM TSGKGKVVPW APQMQILKHP SVAVHVTHSG WNSVMESIAG EVPMICRPFF ADNSLNCRAV EDVWGIGVGI EGGVFTKSGL
401: VSALEQVLLG EGKKMREKIG VLKELCRKAD EPNGSSSQNF NTLLELVTKF QMDSSAN

Best Arabidopsis Sequence Match ( AT1G30530.1 )
(BLAST)

001: MTKFSEPIRD SHVAVLAFFP VGAHAGPLLA VTRRLAAASP STIFSFFNTA RSNASLFSSD HPENIKVHDV SDGVPEGTML GNPLEMVELF LEAAPRIFRS
101: EIAAAEIEVG KKVTCMLTDA FFWFAADIAA ELNATWVAFW AGGANSLCAH LYTDLIRETI GLKDVSMEET LGFIPGMENY RVKDIPEEVV FEDLDSVFPK
201: ALYQMSLALP RASAVFISSF EELEPTLNYN LRSKLKRFLN IAPLTLLSST SEKEMRDPHG CFAWMGKRSA ASVAYISFGT VMEPPPEELV AIAQGLESSK
301: VPFVWSLKEK NMVHLPKGFL DRTREQGIVV PWAPQVELLK HEAMGVNVTH CGWNSVLESV SAGVPMIGRP ILADNRLNGR AVEVVWKVGV MMDNGVFTKE
401: GFEKCLNDVF VHDDGKTMKA NAKKLKEKLQ EDFSMKGSSL ENFKILLDEI VKV

Arabidopsis Description

UGT78D1Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.