Factsheet for TraesCS1B01G023300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G049600.1	Wheat	golgi	52.4	88.2
TraesCS1A01G019600.1	Wheat	golgi	80.44	86.85
TraesCS1B01G023600.1	Wheat	golgi	79.34	85.32
HORVU3Hr1G110110.2	Barley	golgi	76.75	81.73
TraesCS1B01G023700.1	Wheat	golgi	20.85	66.08
TraesCS7B01G059500.1	Wheat	golgi	52.21	61.93
GSMUA_AchrUn_...	Banana	cytosol	20.66	46.47
GSMUA_Achr3P05010_001	Banana	plastid	38.38	45.32
GSMUA_Achr10P...	Banana	plastid	12.55	44.74
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	36.35	42.92
VIT_16s0039g02230.t01	Wine grape	plastid	32.66	38.82
VIT_11s0052g01600.t01	Wine grape	plastid	32.29	38.13
VIT_06s0009g02010.t01	Wine grape	plastid	30.81	37.53
VIT_06s0009g01990.t01	Wine grape	plastid	30.81	37.53
VIT_06s0009g01960.t01	Wine grape	plastid	30.81	37.03
Bra023594.1-P	Field mustard	plastid	31.0	36.6
CDY02736	Canola	plastid	31.0	36.52
AT5G17050.1	Thale cress	plastid	31.0	36.52
CDX85476	Canola	plastid	30.81	36.46
VIT_11s0052g01630.t01	Wine grape	plastid	31.73	35.83
AT5G17030.1	Thale cress	plastid	30.26	35.73
AT5G17040.1	Thale cress	plastid	28.97	35.52
KRH10620	Soybean	golgi	27.12	35.0
AT1G30530.1	Thale cress	plastid	28.97	34.66
KRH02903	Soybean	cytosol	2.58	34.15
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	27.86	33.56
KRH55397	Soybean	extracellular, golgi	20.66	33.33
VIT_06s0009g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	27.68	32.82
VIT_11s0052g01580.t01	Wine grape	cytosol	31.55	32.82
PGSC0003DMT400070649	Potato	extracellular, golgi	27.31	32.82
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	10.7	32.77
Solyc10g083440.1.1	Tomato	extracellular, golgi	26.94	32.66
KRH21732	Soybean	golgi	27.68	32.47
KRG88587	Soybean	extracellular, golgi	21.59	32.41
KRH49848	Soybean	golgi, plastid	26.75	32.22
KRH42070	Soybean	golgi	26.2	31.77
KRH49847	Soybean	nucleus	25.83	31.32
KRH49849	Soybean	golgi, plastid	25.65	31.1
KRH18985	Soybean	cytosol	22.14	24.54

Protein Annotations

EnsemblPlants:TraesCS1B01G023300.1	EnsemblPlantsGene:TraesCS1B01G023300	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016758	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS	PANTHER:PTHR11926
PANTHER:PTHR11926:SF336	PFAM:PF00201	ScanProsite:PS00375	SEG:seg	SUPFAM:SSF53756	MapMan:9.2.2.6.2

Description

No Description!

Coordinates

chr1B:+:10549917..10551631

Molecular Weight (calculated)

56712.0 Da

IEP (calculated)

5.787

GRAVY (calculated)

0.198

Length

542 amino acids

Sequence
(BLAST)

001: MAAVPHVVVI TFPFASHAVK LFRLARALAA AAPAATVSFL STAGSITQLQ EKNQDALEGN LRFVEVPDGL MPPSSGGAGP VPPPNHMARL GLFIAAAEAG
101: GVKVALETAR VAAGGARVSC VVGDAFVWMA ADAAAAVGAP WVPVSTGGPS ALLAHLEGDA LRHDIGDKAA SRADELLTSH PGLGSYRVRD LPDGCVFGEM
201: HLPIVALFRR VAEQLHVPRA ATAVALNTFP GLLPDDVTAA LAAELLEVLP IGPFHLLPVP GDDNATAADP HGCLTWLDGH AAGAVAYASF GTVVTAVVGG
301: QEELRELAAG LEASGAPFLW SLPKEYWPLL PAGFLDLERA KVVPWAPQAA VLRHASVGGF VTHAGWASVL EGVAGGVPMA CRPFFSDQRM NARMVAHVWG
401: FGTVFEQPMT SGTVSAAVSS LLAGDKSTRM QEMRDMAATA FAADGGSRKN LDKLLKIVCP PKEHRRDDLH VDEAAEVTRC APTTHGQLLG ASSLANTVEK
501: YCFSGLCQSF LLKEYKHLVF FFGTEAPEEP DFELTKPSTG QD

Best Arabidopsis Sequence Match ( AT1G30530.1 )
(BLAST)

001: MTKFSEPIRD SHVAVLAFFP VGAHAGPLLA VTRRLAAASP STIFSFFNTA RSNASLFSSD HPENIKVHDV SDGVPEGTML GNPLEMVELF LEAAPRIFRS
101: EIAAAEIEVG KKVTCMLTDA FFWFAADIAA ELNATWVAFW AGGANSLCAH LYTDLIRETI GLKDVSMEET LGFIPGMENY RVKDIPEEVV FEDLDSVFPK
201: ALYQMSLALP RASAVFISSF EELEPTLNYN LRSKLKRFLN IAPLTLLSST SEKEMRDPHG CFAWMGKRSA ASVAYISFGT VMEPPPEELV AIAQGLESSK
301: VPFVWSLKEK NMVHLPKGFL DRTREQGIVV PWAPQVELLK HEAMGVNVTH CGWNSVLESV SAGVPMIGRP ILADNRLNGR AVEVVWKVGV MMDNGVFTKE
401: GFEKCLNDVF VHDDGKTMKA NAKKLKEKLQ EDFSMKGSSL ENFKILLDEI VKV

Arabidopsis Description

UGT78D1Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.