CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 2
plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42070	Soybean	golgi	93.74	93.74
KRH49848	Soybean	golgi, plastid	78.52	78.0
KRH55397	Soybean	extracellular, golgi	58.61	77.98
KRG88587	Soybean	extracellular, golgi	62.42	77.29
KRH49849	Soybean	golgi, plastid	72.71	72.71
KRH21732	Soybean	golgi	66.44	64.29
KRH10620	Soybean	golgi	59.96	63.81
GSMUA_AchrUn_...	Banana	cytosol	24.61	45.64
GSMUA_Achr10P...	Banana	plastid	15.21	44.74
Solyc10g083440.1.1	Tomato	extracellular, golgi	43.18	43.18
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	42.51	42.22
AT5G17050.1	Thale cress	plastid	43.4	42.17
PGSC0003DMT400070649	Potato	extracellular, golgi	42.51	42.13
CDX85476	Canola	plastid	42.73	41.7
Bra023594.1-P	Field mustard	plastid	42.73	41.61
KRH02903	Soybean	cytosol	3.8	41.46
AT5G17040.1	Thale cress	plastid	40.72	41.18
AT1G30530.1	Thale cress	plastid	41.61	41.06
CDY02736	Canola	plastid	41.83	40.65
AT5G17030.1	Thale cress	plastid	40.49	39.43
GSMUA_Achr3P05010_001	Banana	plastid	37.81	36.82
TraesCS7A01G155400.1	Wheat	golgi	36.91	36.1
TraesCS7D01G155700.1	Wheat	golgi	36.69	35.89
TraesCS7B01G059500.1	Wheat	golgi	36.47	35.67
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	36.47	35.51
Os06t0192100-00	Rice	cytosol	31.32	35.44
EER87993	Sorghum	plastid	36.69	34.75
EER99683	Sorghum	plastid	34.9	34.67
Zm00001d006683_P001	Maize	plastid	35.57	33.54
HORVU7Hr1G031800.2	Barley	golgi, peroxisome, plastid	36.02	33.47
Os07t0148200-01	Rice	plastid	35.35	33.12
Zm00001d045055_P001	Maize	peroxisome, plastid	37.14	32.81
TraesCS1D01G019100.1	Wheat	golgi	31.99	30.75
TraesCS1A01G019500.1	Wheat	golgi	31.99	30.69
TraesCS1D01G019200.1	Wheat	golgi	33.33	29.86
TraesCS1A01G019600.1	Wheat	golgi	32.89	29.28
TraesCS1B01G023600.1	Wheat	golgi	32.44	28.77
HORVU3Hr1G110110.2	Barley	golgi	32.66	28.68
KRH18985	Soybean	cytosol	31.32	28.63
TraesCS1B01G049600.1	Wheat	golgi	19.69	27.33
TraesCS1B01G023300.1	Wheat	golgi	31.32	25.83
TraesCS1B01G023700.1	Wheat	golgi	9.4	24.56

Protein Annotations

Gene3D:3.40.50.2000	MapMan:9.2.2.6.2	EMBL:ACUP02004645	EnsemblPlantsGene:GLYMA_07G183200	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016757	GO:GO:0016758	GO:GO:0043231	GO:GO:0080043	GO:GO:0080044	UniProt:I1KL63
EnsemblPlants:KRH49847	ProteinID:KRH49847	ProteinID:KRH49847.1	PFAM:PF00201	ScanProsite:PS00375	PANTHER:PTHR11926
PANTHER:PTHR11926:SF526	SUPFAM:SSF53756	SignalP:SignalP-noTM	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS	UniParc:UPI0002337D6F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:35097755..35099515

Molecular Weight (calculated)

49213.9 Da

IEP (calculated)

7.187

GRAVY (calculated)

0.047

Length

447 amino acids

Sequence
(BLAST)

001: MDHQNKHVAV FAFPFGSHLM PLLNLVLKLA HSLPNCSFSF IGTHKSNAIL FPKPHIPNNI KAYSISDGIP EGHVLGKNPT EKLNLFLQTG PENLHKGIEL
101: AEAETKKRVT CIIADALVTS SLLVAQTLNV PWIALWLPNS CSLSLYFYTD LIRQHCASRA GNKTLDFIPG LSKLRVEDMP QDLLDVGEKE TVFSRELNSL
201: GKVLPQAKVV VMNFFEELEP PLFVQDMRNK LQSLLYVVPL PSTLLPPSDT DSSGCLSWLG MKNSKSVAYV CFGTVVAPPP HELVAVAEAL EESGFPFLWS
301: LKEGLMSLLP NGFVERTKKR GKIVSWAPQT HVLAHDSVGV FVTHCGANSV IESVSSGVPM ICRPFFGDQG VAARVIEDVW EIGMMIEGKM FTKNGLVKSL
401: NLILVHEEGK KIRDNALRVK KTVEDAGRPE GQATQDFNTL VEVISRS

Best Arabidopsis Sequence Match ( AT5G17050.1 )
(BLAST)

001: MTKPSDPTRD SHVAVLAFPF GTHAAPLLTV TRRLASASPS TVFSFFNTAQ SNSSLFSSGD EADRPANIRV YDIADGVPEG YVFSGRPQEA IELFLQAAPE
101: NFRREIAKAE TEVGTEVKCL MTDAFFWFAA DMATEINASW IAFWTAGANS LSAHLYTDLI RETIGVKEVG ERMEETIGVI SGMEKIRVKD TPEGVVFGNL
201: DSVFSKMLHQ MGLALPRATA VFINSFEDLD PTLTNNLRSR FKRYLNIGPL GLLSSTLQQL VQDPHGCLAW MEKRSSGSVA YISFGTVMTP PPGELAAIAE
301: GLESSKVPFV WSLKEKSLVQ LPKGFLDRTR EQGIVVPWAP QVELLKHEAT GVFVTHCGWN SVLESVSGGV PMICRPFFGD QRLNGRAVEV VWEIGMTIIN
401: GVFTKDGFEK CLDKVLVQDD GKKMKCNAKK LKELAYEAVS SKGRSSENFR GLLDAVVNII

Arabidopsis Description

UGT78D2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.