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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023594.1-P Field mustard plastid 79.57 79.74
CDX85476 Canola plastid 78.7 79.04
CDY02736 Canola plastid 78.04 78.04
AT5G17030.1 Thale cress plastid 75.43 75.6
AT5G17040.1 Thale cress plastid 69.57 72.4
AT1G30530.1 Thale cress plastid 71.09 72.19
VIT_16s0039g02230.t01 Wine grape plastid 57.83 58.33
KRH02903 Soybean cytosol 4.57 51.22
VIT_11s0052g01600.t01 Wine grape plastid 48.91 49.02
VIT_06s0009g01960.t01 Wine grape plastid 47.83 48.78
GSMUA_AchrUn_... Banana cytosol 25.22 48.13
VIT_11s0052g01640.t01 Wine grape golgi, mitochondrion, peroxisome, plastid 18.48 48.02
VIT_11s0052g01630.t01 Wine grape plastid 49.57 47.5
Solyc10g083440.1.1 Tomato extracellular, golgi 45.87 47.2
VIT_06s0009g01990.t01 Wine grape plastid 45.65 47.19
VIT_06s0009g02010.t01 Wine grape plastid 45.65 47.19
Solyc07g006720.2.1 Tomato endoplasmic reticulum, golgi 45.65 46.67
VIT_11s0052g01580.t01 Wine grape cytosol 52.61 46.45
PGSC0003DMT400070649 Potato extracellular, golgi 45.22 46.12
KRH10620 Soybean golgi 41.74 45.71
KRH21732 Soybean golgi 45.87 45.67
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 44.35 44.44
KRH49849 Soybean golgi, plastid 42.83 44.07
KRH55397 Soybean extracellular, golgi 32.17 44.05
VIT_06s0009g02000.t01 Wine grape cytosol, mitochondrion, peroxisome 43.26 43.54
GSMUA_Achr10P... Banana plastid 14.35 43.42
KRH49847 Soybean nucleus 42.17 43.4
KRH42070 Soybean golgi 41.96 43.18
GSMUA_Achr3P05010_001 Banana plastid 43.04 43.14
KRG88587 Soybean extracellular, golgi 33.26 42.38
KRH49848 Soybean golgi, plastid 41.09 42.0
TraesCS7D01G155700.1 Wheat golgi 41.09 41.36
TraesCS7A01G155400.1 Wheat golgi 41.09 41.36
TraesCS7B01G059500.1 Wheat golgi 41.09 41.36
Os06t0192100-00 Rice cytosol 34.57 40.25
EER87993 Sorghum plastid 40.65 39.62
EER99683 Sorghum plastid 38.48 39.33
HORVU7Hr1G031800.2 Barley golgi, peroxisome, plastid 41.09 39.29
Os07t0148200-01 Rice plastid 39.57 38.16
TraesCS1D01G019100.1 Wheat golgi 37.83 37.42
Zm00001d045055_P001 Maize peroxisome, plastid 40.65 36.96
TraesCS1A01G019500.1 Wheat golgi 37.17 36.7
Zm00001d006683_P001 Maize plastid 37.17 36.08
TraesCS1D01G019200.1 Wheat golgi 38.04 35.07
TraesCS1A01G019600.1 Wheat golgi 37.39 34.26
TraesCS1B01G023700.1 Wheat golgi 12.61 33.92
HORVU3Hr1G110110.2 Barley golgi 37.17 33.6
TraesCS1B01G023600.1 Wheat golgi 36.74 33.53
TraesCS1B01G049600.1 Wheat golgi 23.26 33.23
KRH18985 Soybean cytosol 34.57 32.52
TraesCS1B01G023300.1 Wheat golgi 36.52 31.0
Protein Annotations
Gene3D:3.40.50.2000EntrezGene:831568MapMan:9.2.2.6.2UniProt:A0A178U9P1ProteinID:AED92377.1ArrayExpress:AT5G17050
EnsemblPlantsGene:AT5G17050RefSeq:AT5G17050TAIR:AT5G17050RefSeq:AT5G17050-TAIR-GEnsemblPlants:AT5G17050.1TAIR:AT5G17050.1
EMBL:AY072325EMBL:AY128739Unigene:At.27563ProteinID:CAC01718.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009628GO:GO:0009698GO:GO:0009813GO:GO:0009987GO:GO:0016740GO:GO:0016757
GO:GO:0016758GO:GO:0019748GO:GO:0035251GO:GO:0043231GO:GO:0047213GO:GO:0047893
GO:GO:0080043GO:GO:0080044GO:GO:0080167GO:GO:0102360GO:GO:0102425EMBL:KJ138682
RefSeq:NP_197207.1ProteinID:OAO89857.1PFAM:PF00201PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF451UniProt:Q9LFJ8
SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSSymbol:UGT78D2UniParc:UPI0000048B5EUniProt:W8PUE7
Description
UGT78D2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUE7]
Coordinates
chr5:-:5607788..5609589
Molecular Weight (calculated)
50488.6 Da
IEP (calculated)
5.739
GRAVY (calculated)
-0.039
Length
460 amino acids
Sequence
(BLAST)
001: MTKPSDPTRD SHVAVLAFPF GTHAAPLLTV TRRLASASPS TVFSFFNTAQ SNSSLFSSGD EADRPANIRV YDIADGVPEG YVFSGRPQEA IELFLQAAPE
101: NFRREIAKAE TEVGTEVKCL MTDAFFWFAA DMATEINASW IAFWTAGANS LSAHLYTDLI RETIGVKEVG ERMEETIGVI SGMEKIRVKD TPEGVVFGNL
201: DSVFSKMLHQ MGLALPRATA VFINSFEDLD PTLTNNLRSR FKRYLNIGPL GLLSSTLQQL VQDPHGCLAW MEKRSSGSVA YISFGTVMTP PPGELAAIAE
301: GLESSKVPFV WSLKEKSLVQ LPKGFLDRTR EQGIVVPWAP QVELLKHEAT GVFVTHCGWN SVLESVSGGV PMICRPFFGD QRLNGRAVEV VWEIGMTIIN
401: GVFTKDGFEK CLDKVLVQDD GKKMKCNAKK LKELAYEAVS SKGRSSENFR GLLDAVVNII
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.