Factsheet for VIT_06s0009g01960.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	89.58	88.4
VIT_06s0009g01990.t01	Wine grape	plastid	72.51	73.48
VIT_06s0009g02010.t01	Wine grape	plastid	72.51	73.48
VIT_11s0052g01600.t01	Wine grape	plastid	61.2	60.13
VIT_11s0052g01630.t01	Wine grape	plastid	62.08	58.33
VIT_16s0039g02230.t01	Wine grape	plastid	54.99	54.39
VIT_11s0052g01580.t01	Wine grape	cytosol	62.08	53.74
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	20.62	52.54
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	51.0	51.11
PGSC0003DMT400070649	Potato	extracellular, golgi	49.89	49.89
GSMUA_AchrUn_...	Banana	cytosol	26.39	49.38
CDX85476	Canola	plastid	49.89	49.13
CDY02736	Canola	plastid	49.89	48.91
Bra023594.1-P	Field mustard	plastid	49.67	48.8
AT5G17050.1	Thale cress	plastid	48.78	47.83
AT5G17040.1	Thale cress	plastid	45.9	46.83
AT1G30530.1	Thale cress	plastid	46.34	46.14
AT5G17030.1	Thale cress	plastid	45.9	45.1
Solyc10g083440.1.1	Tomato	extracellular, golgi	44.35	44.74
GSMUA_Achr3P05010_001	Banana	plastid	44.12	43.36
GSMUA_Achr10P...	Banana	plastid	14.41	42.76
KRH02903	Soybean	cytosol	3.77	41.46
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	41.69	40.96
Os06t0192100-00	Rice	cytosol	35.48	40.51
TraesCS7B01G059500.1	Wheat	golgi	39.69	39.17
TraesCS7D01G155700.1	Wheat	golgi	39.69	39.17
TraesCS7A01G155400.1	Wheat	golgi	39.25	38.73
EER99683	Sorghum	plastid	38.36	38.44
EER87993	Sorghum	plastid	40.13	38.35
Os07t0148200-01	Rice	plastid	39.69	37.53
HORVU7Hr1G031800.2	Barley	golgi, peroxisome, plastid	39.69	37.21
Zm00001d006683_P001	Maize	plastid	38.14	36.29
TraesCS1D01G019100.1	Wheat	golgi	37.25	36.13
Zm00001d045055_P001	Maize	peroxisome, plastid	40.35	35.97
TraesCS1A01G019500.1	Wheat	golgi	36.59	35.41
TraesCS1D01G019200.1	Wheat	golgi	39.02	35.27
HORVU3Hr1G110110.2	Barley	golgi	38.8	34.38
TraesCS1A01G019600.1	Wheat	golgi	38.14	34.26
TraesCS1B01G049600.1	Wheat	golgi	24.39	34.16
TraesCS1B01G023600.1	Wheat	golgi	37.47	33.53
KRH18985	Soybean	cytosol	34.81	32.11
TraesCS1B01G023300.1	Wheat	golgi	37.03	30.81
TraesCS1B01G023700.1	Wheat	golgi	11.53	30.41

Protein Annotations

EntrezGene:100249544	wikigene:100249544	Gene3D:3.40.50.2000	MapMan:9.2.2.6.2	ProteinID:CCB49131	ProteinID:CCB49131.1
UniProt:F6HAH1	EMBL:FN595504	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758
GO:GO:0043231	GO:GO:0080043	GO:GO:0080044	EntrezGene:LOC100249544	wikigene:LOC100249544	PFAM:PF00201
ScanProsite:PS00375	PANTHER:PTHR11926	PANTHER:PTHR11926:SF418	SUPFAM:SSF53756	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS
UniParc:UPI000210A0EA	ArrayExpress:VIT_06s0009g01960	EnsemblPlantsGene:VIT_06s0009g01960	EnsemblPlants:VIT_06s0009g01960.t01	RefSeq:XP_002269185	RefSeq:XP_002269185.1
SEG:seg	:	:	:	:	:

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F6HAH1]

Coordinates

chr6:+:14190688..14192343

Molecular Weight (calculated)

48515.5 Da

IEP (calculated)

6.439

GRAVY (calculated)

0.036

Length

451 amino acids

Sequence
(BLAST)

001: MDQHIGVLAF PFTSHPQTLL GLVRRLAFAA PHTKFSFFST ANSNAFLFST QSADGLNNVK PYDVADGVPE GHVLSGNPEE AVGFFLKGAV GKFRQAMEVA
101: VADTARKISC LVTDAFLWFG ADMAEEMGVP WVPFWIAGLS ALSVHFHTDA IRQKIGLNGH EDQTLDFIPG LSAMRVRDLP EGIVSGDLDS APSRMLHKMG
201: LLLPRATAVI ANSVEELNPI VATDLKSKLP KLLCLAPPTP SSQPASNPDT SSCLSWLDKQ KAKTVAYISF GSILSPSPDE LVALTEALEA TGVPFLWSIK
301: DNAKKNLPKG FLEMTSGKGK VVPWAPQMQV LKHPSVGVHV THSGWNSVME SIAGEVPMIC RPFFADNSLN CRAVEDVWGI GVGIEGGVFT KSGLVSALEQ
401: VLLGEGKKMR EKIGVLKELC RKADDPNGSS SQNFSTLLEL VTKFQMDSSA N

Best Arabidopsis Sequence Match ( AT5G17050.1 )
(BLAST)

001: MTKPSDPTRD SHVAVLAFPF GTHAAPLLTV TRRLASASPS TVFSFFNTAQ SNSSLFSSGD EADRPANIRV YDIADGVPEG YVFSGRPQEA IELFLQAAPE
101: NFRREIAKAE TEVGTEVKCL MTDAFFWFAA DMATEINASW IAFWTAGANS LSAHLYTDLI RETIGVKEVG ERMEETIGVI SGMEKIRVKD TPEGVVFGNL
201: DSVFSKMLHQ MGLALPRATA VFINSFEDLD PTLTNNLRSR FKRYLNIGPL GLLSSTLQQL VQDPHGCLAW MEKRSSGSVA YISFGTVMTP PPGELAAIAE
301: GLESSKVPFV WSLKEKSLVQ LPKGFLDRTR EQGIVVPWAP QVELLKHEAT GVFVTHCGWN SVLESVSGGV PMICRPFFGD QRLNGRAVEV VWEIGMTIIN
401: GVFTKDGFEK CLDKVLVQDD GKKMKCNAKK LKELAYEAVS SKGRSSENFR GLLDAVVNII

Arabidopsis Description

UGT78D2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.