Factsheet for VIT_11s0052g01630.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 1
mitochondrion 3
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01600.t01	Wine grape	plastid	84.58	88.45
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	27.08	73.45
VIT_06s0009g01960.t01	Wine grape	plastid	58.33	62.08
VIT_06s0009g01990.t01	Wine grape	plastid	53.96	58.2
VIT_06s0009g02010.t01	Wine grape	plastid	53.96	58.2
VIT_06s0009g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	53.12	55.8
VIT_11s0052g01580.t01	Wine grape	cytosol	60.42	55.66
VIT_16s0039g02230.t01	Wine grape	plastid	50.21	52.85
GSMUA_AchrUn_...	Banana	cytosol	26.25	52.28
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	48.12	51.33
PGSC0003DMT400070649	Potato	extracellular, golgi	47.92	51.0
Solyc10g083440.1.1	Tomato	extracellular, golgi	47.29	50.78
CDX85476	Canola	plastid	48.12	50.44
Bra023594.1-P	Field mustard	plastid	48.12	50.33
CDY02736	Canola	plastid	47.71	49.78
AT5G17050.1	Thale cress	plastid	47.5	49.57
AT5G17030.1	Thale cress	plastid	46.25	48.37
AT5G17040.1	Thale cress	plastid	43.12	46.83
KRH02903	Soybean	cytosol	3.96	46.34
AT1G30530.1	Thale cress	plastid	42.5	45.03
GSMUA_Achr10P...	Banana	plastid	14.17	44.74
GSMUA_Achr3P05010_001	Banana	plastid	42.08	44.01
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	41.25	43.14
Os06t0192100-00	Rice	cytosol	34.17	41.52
TraesCS7B01G059500.1	Wheat	golgi	38.12	40.04
TraesCS7D01G155700.1	Wheat	golgi	37.92	39.82
EER87993	Sorghum	plastid	38.75	39.41
TraesCS7A01G155400.1	Wheat	golgi	37.5	39.39
Os07t0148200-01	Rice	plastid	38.33	38.57
HORVU7Hr1G031800.2	Barley	golgi, peroxisome, plastid	38.54	38.46
EER99683	Sorghum	plastid	36.04	38.44
TraesCS1D01G019100.1	Wheat	golgi	36.25	37.42
TraesCS1A01G019500.1	Wheat	golgi	36.25	37.34
Zm00001d045055_P001	Maize	peroxisome, plastid	38.12	36.17
TraesCS1D01G019200.1	Wheat	golgi	37.5	36.07
Zm00001d006683_P001	Maize	plastid	35.21	35.65
KRH18985	Soybean	cytosol	35.21	34.56
TraesCS1A01G019600.1	Wheat	golgi	36.04	34.46
HORVU3Hr1G110110.2	Barley	golgi	35.83	33.79
TraesCS1B01G023600.1	Wheat	golgi	35.0	33.33
TraesCS1B01G023700.1	Wheat	golgi	11.67	32.75
TraesCS1B01G049600.1	Wheat	golgi	21.67	32.3
TraesCS1B01G023300.1	Wheat	golgi	35.83	31.73

Protein Annotations

EntrezGene:100244489	wikigene:100244489	Gene3D:3.40.50.2000	MapMan:9.2.2.6.2	EMBL:AB499075	ProteinID:BAI22847
ProteinID:BAI22847.1	ProteinID:CCB44600	ProteinID:CCB44600.1	UniProt:F6GXB4	EMBL:FN594964	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016757	GO:GO:0016758	GO:GO:0043231	GO:GO:0080043	GO:GO:0080044
PFAM:PF00201	ScanProsite:PS00375	PANTHER:PTHR11926	PANTHER:PTHR11926:SF418	SUPFAM:SSF53756	InterPro:UDP_glucos_trans
InterPro:UDP_glycos_trans_CS	UniParc:UPI000210868F	ArrayExpress:VIT_11s0052g01630	EnsemblPlantsGene:VIT_11s0052g01630	EnsemblPlants:VIT_11s0052g01630.t01	EntrezGene:VVGT6
wikigene:VVGT6	unigene:Vvi.26331	SEG:seg	:	:	:

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F6GXB4]

Coordinates

chr11:-:19367554..19373124

Molecular Weight (calculated)

52421.6 Da

IEP (calculated)

7.031

GRAVY (calculated)

0.114

Length

480 amino acids

Sequence
(BLAST)

001: MTATASSMDR HVAVLGFPPH AATLLKLLRR LASAAPTTIF SFFNTAKANN SIFSPQSPHG LHNLRVYDVA DGVPEGHVLS ANPLERIDLF FKATPGNFYD
101: AIQVAEAEIG RKISCLVSDA FLWFTADMAE EMRVPWLAIW TSALCSLSVH IYTDAIREAV KVVGRVQDQT LDFIPGFSAI KVEDLPEGIV FGDIESPFAC
201: MLHKMGLTLP RATAVATNSF EELEPIVTND PKSKLQKVLA VGPFDLSSPP QLILDASGCL PWLDNKKEAS VAYVSFGSIA TPPPNEIVAL AEALEATGIP
301: FLWSLREHAM DNLPKGFLER TTAHGKVVSW APQPQILAHA SVGVFITHSG WNSVIESIVG GVPMICRPFF GDQCIDKRMV EDVWGIGVGV EGGVLTKSGV
401: MSALGLILSH EGNKMREKIR VLKELARRAV EPNGSSTQNL SNLLEVITTS KLHLDTNKYD IRNRRRKLVS ISLMIIKRVH

Best Arabidopsis Sequence Match ( AT5G17050.1 )
(BLAST)

001: MTKPSDPTRD SHVAVLAFPF GTHAAPLLTV TRRLASASPS TVFSFFNTAQ SNSSLFSSGD EADRPANIRV YDIADGVPEG YVFSGRPQEA IELFLQAAPE
101: NFRREIAKAE TEVGTEVKCL MTDAFFWFAA DMATEINASW IAFWTAGANS LSAHLYTDLI RETIGVKEVG ERMEETIGVI SGMEKIRVKD TPEGVVFGNL
201: DSVFSKMLHQ MGLALPRATA VFINSFEDLD PTLTNNLRSR FKRYLNIGPL GLLSSTLQQL VQDPHGCLAW MEKRSSGSVA YISFGTVMTP PPGELAAIAE
301: GLESSKVPFV WSLKEKSLVQ LPKGFLDRTR EQGIVVPWAP QVELLKHEAT GVFVTHCGWN SVLESVSGGV PMICRPFFGD QRLNGRAVEV VWEIGMTIIN
401: GVFTKDGFEK CLDKVLVQDD GKKMKCNAKK LKELAYEAVS SKGRSSENFR GLLDAVVNII

Arabidopsis Description

UGT78D2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.