Factsheet for TraesCS1B01G023600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G019600.1	Wheat	golgi	88.49	88.84
TraesCS1B01G049600.1	Wheat	golgi	55.16	86.34
HORVU3Hr1G110110.2	Barley	golgi	82.94	82.12
TraesCS1B01G023300.1	Wheat	golgi	85.32	79.34
TraesCS1B01G023700.1	Wheat	golgi	23.02	67.84
TraesCS7B01G059500.1	Wheat	golgi	56.55	62.36
GSMUA_Achr3P05010_001	Banana	plastid	41.47	45.53
GSMUA_AchrUn_...	Banana	cytosol	21.63	45.23
GSMUA_Achr10P...	Banana	plastid	13.49	44.74
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	38.29	42.05
VIT_16s0039g02230.t01	Wine grape	plastid	34.72	38.38
VIT_06s0009g02010.t01	Wine grape	plastid	33.33	37.75
VIT_06s0009g01990.t01	Wine grape	plastid	33.33	37.75
VIT_06s0009g01960.t01	Wine grape	plastid	33.53	37.47
CDY02736	Canola	plastid	34.13	37.39
CDX85476	Canola	plastid	33.93	37.34
VIT_11s0052g01600.t01	Wine grape	plastid	33.93	37.25
Bra023594.1-P	Field mustard	plastid	33.93	37.25
AT5G17050.1	Thale cress	plastid	33.53	36.74
KRH02903	Soybean	cytosol	2.98	36.59
AT5G17040.1	Thale cress	plastid	31.94	36.43
AT5G17030.1	Thale cress	plastid	33.13	36.38
AT1G30530.1	Thale cress	plastid	32.14	35.76
VIT_11s0052g01630.t01	Wine grape	plastid	33.33	35.0
KRH10620	Soybean	golgi	28.97	34.76
Solyc07g006720.2.1	Tomato	endoplasmic reticulum, golgi	30.56	34.22
KRH55397	Soybean	extracellular, golgi	22.62	33.93
PGSC0003DMT400070649	Potato	extracellular, golgi	30.16	33.7
VIT_11s0052g01580.t01	Wine grape	cytosol	34.33	33.21
KRH21732	Soybean	golgi	30.36	33.12
VIT_06s0009g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	29.96	33.04
KRG88587	Soybean	extracellular, golgi	23.41	32.69
KRH49848	Soybean	golgi, plastid	29.17	32.67
KRH42070	Soybean	golgi	28.97	32.66
KRH49847	Soybean	nucleus	28.77	32.44
Solyc10g083440.1.1	Tomato	extracellular, golgi	28.77	32.44
VIT_11s0052g01640.t01	Wine grape	golgi, mitochondrion, peroxisome, plastid	11.31	32.2
KRH49849	Soybean	golgi, plastid	28.17	31.77
KRH18985	Soybean	cytosol	24.01	24.74

Protein Annotations

EnsemblPlants:TraesCS1B01G023600.1	EnsemblPlantsGene:TraesCS1B01G023600	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016758	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS	PANTHER:PTHR11926
PANTHER:PTHR11926:SF336	PFAM:PF00201	ScanProsite:PS00375	SEG:seg	SUPFAM:SSF53756	MapMan:9.2.2.6.2

Description

No Description!

Coordinates

chr1B:-:10973467..10975079

Molecular Weight (calculated)

52379.0 Da

IEP (calculated)

6.229

GRAVY (calculated)

0.279

Length

504 amino acids

Sequence
(BLAST)

001: MAAVPHVVVI TFPFASHAVK LFRLARALAA AAPAATFSFL STAGSIAQLQ EKNQDALEGN LRFVEVPDGL MSPSSGGAAP VPPPNHMARL GLFIAAAEAG
101: GVKVALETAR IAAGGVRVTC VVGDAFVWMA AEAAAGVGAP WVPVWTGGPS ALLAHLQGDA LRDDIGDKAA SRADELLTAH PGLGSYCVRD LPDGCVFGEM
201: HLPIVALFRR VADQLLVPRA ATAVALNTFP GLLPDDVTAA LAAELPEVLP IGPFHLLPVP GDDSANAADP HGCLAWLNGH PARAVAYASF GTVVTAVVGG
301: QEELRELAAG LEASGTPFLW SLPKEYWPLL PAGFLDLERA KVVPWAPQAA VLRHASVGGF VTHAGWASVL EGVAGGVPMA CRPFFSDQRM NARMVAHVWG
401: FGTVFEQAMT RGTVSATVSW LLAGDQATRM QEMRDMAATA FAADGGSRKN FDKLLKIVCP SPQEHSRGGL QVDEAAEVTR CAPATTHAQL LGASSLAHTV
501: APQK

Best Arabidopsis Sequence Match ( AT1G30530.1 )
(BLAST)

001: MTKFSEPIRD SHVAVLAFFP VGAHAGPLLA VTRRLAAASP STIFSFFNTA RSNASLFSSD HPENIKVHDV SDGVPEGTML GNPLEMVELF LEAAPRIFRS
101: EIAAAEIEVG KKVTCMLTDA FFWFAADIAA ELNATWVAFW AGGANSLCAH LYTDLIRETI GLKDVSMEET LGFIPGMENY RVKDIPEEVV FEDLDSVFPK
201: ALYQMSLALP RASAVFISSF EELEPTLNYN LRSKLKRFLN IAPLTLLSST SEKEMRDPHG CFAWMGKRSA ASVAYISFGT VMEPPPEELV AIAQGLESSK
301: VPFVWSLKEK NMVHLPKGFL DRTREQGIVV PWAPQVELLK HEAMGVNVTH CGWNSVLESV SAGVPMIGRP ILADNRLNGR AVEVVWKVGV MMDNGVFTKE
401: GFEKCLNDVF VHDDGKTMKA NAKKLKEKLQ EDFSMKGSSL ENFKILLDEI VKV

Arabidopsis Description

UGT78D1Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.