Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G028500.2 | Wheat | nucleus | 93.26 | 93.14 |
| TraesCS7D01G127400.1 | Wheat | nucleus | 93.01 | 92.89 |
| HORVU7Hr1G026910.29 | Barley | cytosol, nucleus | 79.4 | 80.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.19 | 53.18 |
| TraesCS7A01G128300.1 | Wheat | nucleus | 58.43 | 52.76 |
| Os06t0275500-01 | Rice | nucleus | 55.93 | 50.0 |
| EER89265 | Sorghum | plastid | 56.8 | 48.77 |
| KRH77020 | Soybean | nucleus | 49.81 | 46.34 |
| KRH28444 | Soybean | nucleus | 49.69 | 46.23 |
| VIT_07s0031g00320.t01 | Wine grape | nucleus | 49.31 | 45.25 |
| Zm00001d036296_P004 | Maize | nucleus, plastid | 54.31 | 44.21 |
| AT2G23380.1 | Thale cress | nucleus | 47.94 | 42.57 |
| Solyc03g044380.2.1 | Tomato | nucleus | 48.81 | 42.45 |
| PGSC0003DMT400084490 | Potato | nucleus | 48.56 | 42.19 |
| CDY38942 | Canola | nucleus, plastid | 47.57 | 42.01 |
| Bra032169.1-P | Field mustard | nucleus, plastid | 47.44 | 41.9 |
| CDX89569 | Canola | nucleus, plastid | 47.44 | 41.76 |
| PGSC0003DMT400010235 | Potato | nucleus | 36.45 | 35.65 |
| TraesCS4A01G121300.4 | Wheat | mitochondrion | 39.58 | 32.75 |
| TraesCS7A01G453700.1 | Wheat | nucleus | 6.74 | 15.98 |
| TraesCS5A01G179900.1 | Wheat | nucleus | 6.87 | 15.19 |
| TraesCS2A01G302100.1 | Wheat | nucleus | 7.37 | 11.75 |
| TraesCS6A01G219600.1 | Wheat | nucleus | 9.74 | 10.17 |
| TraesCS3A01G237200.2 | Wheat | nucleus | 11.98 | 9.34 |
| TraesCS3A01G143300.2 | Wheat | plastid | 11.24 | 9.05 |
| TraesCS5A01G165200.1 | Wheat | plastid | 10.61 | 7.83 |
| TraesCS5A01G042700.1 | Wheat | nucleus, plastid | 9.99 | 6.18 |
| TraesCS5A01G357600.1 | Wheat | plastid | 10.74 | 4.45 |
| TraesCS2A01G005000.1 | Wheat | nucleus | 9.74 | 4.31 |
| TraesCS5A01G357700.1 | Wheat | mitochondrion | 0.12 | 1.25 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.1.1.4 | MapMan:12.3.3.3 | Gene3D:2.170.270.10 | InterPro:CXC_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0031519 | InterPro:Hist-Lys_N-MeTrfase_EZ | InterPro:IPR001214 | InterPro:IPR025778 | InterPro:IPR026489 | PFAM:PF00856 |
| PFscan:PS50280 | PFscan:PS51576 | PFscan:PS51633 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF237 | InterPro:SANT/Myb |
| InterPro:SET_dom | SMART:SM00317 | SMART:SM00717 | SMART:SM01114 | SUPFAM:SSF82199 | InterPro:Tesmin/TSO1-like_CXC |
| EnsemblPlantsGene:TraesCS7A01G128600 | EnsemblPlants:TraesCS7A01G128600.1 | TIGR:cd00167 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7A:-:82506553..82516816
Molecular Weight (calculated)
89066.4 Da
IEP (calculated)
7.000
GRAVY (calculated)
-0.686
Length
801 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPDRHRSPG SGEIHRIRSF SVVSNHTQVH LVPQDDEAIP DGELGEVSVS TYVNSLKNEF ATLRSAEIKD MVENNKIKLS TIMQSNRGSS TIWQMSALDG
101: TGLATNLLTP RQDDVSCSTL GLELCLAEKD GGSSQEDSPY GTLTATLGGI LTAKNANKPI ELPTVSGLPP YTTWVFLDRN QRMTEDQSAF HRQNIYYNAD
201: CGKALMFSDS EDEVVEDEEE KREFKSSEDC FIRMTIDGCG MSDEVLETLA QCFEKTAGDI KARYEILQGE NTEGSSKEVP KLNAKLKDIY HDKDLAAALD
301: SFDNLFCRRC LVFYCKLHGC SQDLIFPAEK QSPWDSMDDG PCGSHCYKLA TKHKDSVAYS QHNSPSTSSW KKDAHQMENN SALVEDRNYL MVETNNEHSA
401: TDGHDSSRKE ELVDKNICRQ EDNLVSWMVI EQELLVKGVE IFGRNSCLIA RNLLDGEKSC SDVFQYMNYI ENSSTSEGHE LGLGSRRPRK QGKVKHISRS
501: AVYPLITKRI AARKGELRQH YNPCGCQSAC GKQCPCRENY TSCEKFCVCP KACKNRFRGC KCAKAQCRNR QCPCFAADRE CDPDVCRNCG VGCGDGSLGV
601: PNQRGDNYGC QNMKLLLRQQ QKVVLGRSDV SGWGAFVKNT VGKDDCLGEY TGELISHREA AKRGQRYDRD NSSFLFNLNT EFVLDAFRMG NKLKFANHSP
701: DPNCYAKVMF VVGDHRVGIF AKERINAGTE IFYDYHYAPD EAPAWALKAD DATGAKDPGQ SSSGSAKKAD APGAKDPGQS SSGRAKRPRK SSRGRPRKHA
801: R
101: TGLATNLLTP RQDDVSCSTL GLELCLAEKD GGSSQEDSPY GTLTATLGGI LTAKNANKPI ELPTVSGLPP YTTWVFLDRN QRMTEDQSAF HRQNIYYNAD
201: CGKALMFSDS EDEVVEDEEE KREFKSSEDC FIRMTIDGCG MSDEVLETLA QCFEKTAGDI KARYEILQGE NTEGSSKEVP KLNAKLKDIY HDKDLAAALD
301: SFDNLFCRRC LVFYCKLHGC SQDLIFPAEK QSPWDSMDDG PCGSHCYKLA TKHKDSVAYS QHNSPSTSSW KKDAHQMENN SALVEDRNYL MVETNNEHSA
401: TDGHDSSRKE ELVDKNICRQ EDNLVSWMVI EQELLVKGVE IFGRNSCLIA RNLLDGEKSC SDVFQYMNYI ENSSTSEGHE LGLGSRRPRK QGKVKHISRS
501: AVYPLITKRI AARKGELRQH YNPCGCQSAC GKQCPCRENY TSCEKFCVCP KACKNRFRGC KCAKAQCRNR QCPCFAADRE CDPDVCRNCG VGCGDGSLGV
601: PNQRGDNYGC QNMKLLLRQQ QKVVLGRSDV SGWGAFVKNT VGKDDCLGEY TGELISHREA AKRGQRYDRD NSSFLFNLNT EFVLDAFRMG NKLKFANHSP
701: DPNCYAKVMF VVGDHRVGIF AKERINAGTE IFYDYHYAPD EAPAWALKAD DATGAKDPGQ SSSGSAKKAD APGAKDPGQS SSGRAKRPRK SSRGRPRKHA
801: R
001: MEKENHEDDG EGLPPELNQI KEQIEKERFL HIKRKFELRY IPSVATHASH HQSFDLNQPA AEDDNGGDNK SLLSRMQNPL RHFSASSDYN SYEDQGYVLD
101: EDQDYALEED VPLFLDEDVP LLPSVKLPIV EKLPRSITWV FTKSSQLMAE SDSVIGKRQI YYLNGEALEL SSEEDEEDEE EDEEEIKKEK CEFSEDVDRF
201: IWTVGQDYGL DDLVVRRALA KYLEVDVSDI LERYNELKLK NDGTAGEASD LTSKTITTAF QDFADRRHCR RCMIFDCHMH EKYEPESRSS EDKSSLFEDE
301: DRQPCSEHCY LKVRSVTEAD HVMDNDNSIS NKIVVSDPNN TMWTPVEKDL YLKGIEIFGR NSCDVALNIL RGLKTCLEIY NYMREQDQCT MSLDLNKTTQ
401: RHNQVTKKVS RKSSRSVRKK SRLRKYARYP PALKKTTSGE AKFYKHYTPC TCKSKCGQQC PCLTHENCCE KYCGCSKDCN NRFGGCNCAI GQCTNRQCPC
501: FAANRECDPD LCRSCPLSCG DGTLGETPVQ IQCKNMQFLL QTNKKILIGK SDVHGWGAFT WDSLKKNEYL GEYTGELITH DEANERGRIE DRIGSSYLFT
601: LNDQLEIDAR RKGNEFKFLN HSARPNCYAK LMIVRGDQRI GLFAERAIEE GEELFFDYCY GPEHADWSRG REPRKTGASK RSKEARPAR
101: EDQDYALEED VPLFLDEDVP LLPSVKLPIV EKLPRSITWV FTKSSQLMAE SDSVIGKRQI YYLNGEALEL SSEEDEEDEE EDEEEIKKEK CEFSEDVDRF
201: IWTVGQDYGL DDLVVRRALA KYLEVDVSDI LERYNELKLK NDGTAGEASD LTSKTITTAF QDFADRRHCR RCMIFDCHMH EKYEPESRSS EDKSSLFEDE
301: DRQPCSEHCY LKVRSVTEAD HVMDNDNSIS NKIVVSDPNN TMWTPVEKDL YLKGIEIFGR NSCDVALNIL RGLKTCLEIY NYMREQDQCT MSLDLNKTTQ
401: RHNQVTKKVS RKSSRSVRKK SRLRKYARYP PALKKTTSGE AKFYKHYTPC TCKSKCGQQC PCLTHENCCE KYCGCSKDCN NRFGGCNCAI GQCTNRQCPC
501: FAANRECDPD LCRSCPLSCG DGTLGETPVQ IQCKNMQFLL QTNKKILIGK SDVHGWGAFT WDSLKKNEYL GEYTGELITH DEANERGRIE DRIGSSYLFT
601: LNDQLEIDAR RKGNEFKFLN HSARPNCYAK LMIVRGDQRI GLFAERAIEE GEELFFDYCY GPEHADWSRG REPRKTGASK RSKEARPAR
Arabidopsis Description
MEAHistone-lysine N-methyltransferase MEDEA [Source:UniProtKB/Swiss-Prot;Acc:O65312]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.