Factsheet for PGSC0003DMT400084490

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400049479
PGSC0003DMT400061016

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23380.1	PGSC0003DMT400049479	AT3G20740.1	14871310
AT2G23380.1	PGSC0003DMT400049479	AT3G20740.1	15456723
AT2G23380.1	PGSC0003DMT400049479	AT3G20740.1	18812497
AT2G23380.1	PGSC0003DMT400061016	AT5G58230.1	23778966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g044380.2.1	Tomato	nucleus	96.96	97.07
VIT_07s0031g00320.t01	Wine grape	nucleus	65.08	68.73
KRH77020	Soybean	nucleus	61.28	65.62
KRH28444	Soybean	nucleus	60.95	65.27
PGSC0003DMT400010235	Potato	nucleus	56.4	63.49
GSMUA_AchrUn_...	Banana	nucleus	51.84	62.0
Bra032169.1-P	Field mustard	nucleus, plastid	57.48	58.43
CDY38942	Canola	nucleus, plastid	57.38	58.32
CDX89569	Canola	nucleus, plastid	57.38	58.13
AT2G23380.1	Thale cress	nucleus	56.62	57.87
TraesCS7A01G128300.1	Wheat	nucleus	54.34	56.48
TraesCS7D01G127100.2	Wheat	nucleus	54.23	56.37
TraesCS7B01G028200.2	Wheat	nucleus	54.12	56.26
EER89265	Sorghum	plastid	56.07	55.41
Os06t0275500-01	Rice	nucleus	53.8	55.36
HORVU7Hr1G026840.1	Barley	cytosol, mitochondrion, nucleus	53.9	54.08
Zm00001d036296_P004	Maize	nucleus, plastid	54.56	51.12
TraesCS7B01G028500.2	Wheat	nucleus	43.6	50.12
TraesCS7D01G127400.1	Wheat	nucleus	43.06	49.5
HORVU7Hr1G026910.29	Barley	cytosol, nucleus	41.54	48.67
TraesCS7A01G128600.1	Wheat	nucleus	42.19	48.56
PGSC0003DMT400023342	Potato	nucleus	42.52	47.29
PGSC0003DMT400028986	Potato	endoplasmic reticulum, extracellular	4.01	19.68
PGSC0003DMT400059166	Potato	nucleus	6.29	19.08
PGSC0003DMT400028514	Potato	nucleus	4.01	16.52
PGSC0003DMT400059198	Potato	nucleus	6.07	15.64
PGSC0003DMT400086207	Potato	nucleus	4.01	14.86
PGSC0003DMT400010951	Potato	cytosol	3.69	14.78
PGSC0003DMT400028500	Potato	nucleus	5.42	12.47
PGSC0003DMT400046777	Potato	nucleus	8.46	12.13
PGSC0003DMT400023546	Potato	nucleus	6.72	8.81

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:102592748	MapMan:12.3.3.1.1.4	MapMan:12.3.3.3	Gene3D:2.170.270.10	InterPro:CXC_dom
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0031519	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_EZ	InterPro:IPR001214	InterPro:IPR025778
InterPro:IPR026489	UniProt:M1D7T4	PFAM:PF00856	EnsemblPlantsGene:PGSC0003DMG400034096	PGSC:PGSC0003DMG400034096	EnsemblPlants:PGSC0003DMT400084490
PFscan:PS50280	PFscan:PS51576	PFscan:PS51633	PANTHER:PTHR22884	PANTHER:PTHR22884:SF237	InterPro:SANT/Myb
InterPro:SET_dom	SMART:SM00317	SMART:SM00717	SMART:SM01114	SUPFAM:SSF82199	InterPro:Tesmin/TSO1-like_CXC
UniParc:UPI00029532A4	RefSeq:XP_006361735.1	SEG:seg	:	:	:

Description

EZ2 [Source:PGSC_GENE;Acc:PGSC0003DMG400034096]

Coordinates

chr3:+:8257905..8267587

Molecular Weight (calculated)

103035.0 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.759

Length

922 amino acids

Sequence
(BLAST)

001: MSPASDNSLS DSQTQRLNDL SIVSPEEATV EPDEVLSVIE SLKRRIASER ADYIKKRVEG NTQKLENLTK DLYNLATERK CLEIFDADGR IDLLSKRQKD
101: ALDMQNGVDT SNADDDSNSS EDDGYATSAI LLGSSIAVKN AVRPIKLPEV KRIPPYTSWI FLDRNQRMTE DQSVVGRRRI YYDQNGGETL ICSDSDEEVL
201: EEEEEKKVFA ESEDYMLRMT VKEVGLSDIV LDLLGQCLSR KPSEVKARYE GLVKEDDAGT SKNEFTESSL DLYLAKDLDA ALDSFDNLFC RRCLVFDCRL
301: HGCSQDLIFP AEKQLPWYCS NADMEPCGPN CFSLAKKFES NATVISPQCA SHGEKSILPS DVANNTQMPG RKHVSRRSKC SKGEGAPNAK NISESSDSDI
401: RPVNDITSNE RSSSPSKSKS DNKDGSNKRN SKRIAEHVLV AIKKRQKKMA VLESDSVASE SLGFKDLNLH SISRKENEDA SPSSQKAQCH SAKRSRKKNS
501: PVLDNKNSLQ GKAFGCKLME VSSAKPVTNC DDTLGKNEYV GENNCKQEID GTKSWRPIEK ALFEKGLEMF GRSSCLIARN LMNGLKTCWE VFQYMNNSGN
601: KLFSGTGDGM DGILEGGSNG DGQEIMGNEP RRRSRFLRRR GKVRRLKYTW KSTGYHAIRK RISERKDQPC RQFNPCGCQG PCGKECSCIV NGTCCEKYCG
701: CPKGCKNRFR GCHCAKSQCR SRQCPCFAAG RECDPDVCRN CWISCGDGTL GVPLQRGDSH ECRNMKLLLK QQQKVLLGRS DVSGWGAFLK NTVGKHEYLG
801: EYTGELISHR EADKRGKIYD RENSSFLFNL NDQFVLDAHR KGDKLKFANH SPVPNCYAKV MMVAGDHRVG IFANERICAG EELFYDYRYE PDSAPAWARK
901: PEASGTRKED AAPSSGRARK HT

Best Arabidopsis Sequence Match ( AT2G23380.1 )
(BLAST)

001: MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG
101: IDESNNNRYV EDGPASSGMV QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI CSDSEEEAID DEEEKRDFLE
201: PEDYIIRMTL EQLGLSDSVL AELASFLSRS TSEIKARHGV LMKEKEVSES GDNQAESSLL NKDMEGALDS FDNLFCRRCL VFDCRLHGCS QDLIFPAEKP
301: APWCPPVDEN LTCGANCYKT LLKSGRFPGY GTIEGKTGTS SDGAGTKTTP TKFSSKLNGR KPKTFPSESA SSNEKCALET SDSENGLQQD TNSDKVSSSP
401: KVKGSGRRVG RKRNKNRVAE RVPRKTQKRQ KKTEASDSDS IASGSCSPSD AKHKDNEDAT SSSQKHVKSG NSGKSRKNGT PAEVSNNSVK DDVPVCQSNE
501: VASELDAPGS DESLRKEEFM GETVSRGRLA TNKLWRPLEK SLFDKGVEIF GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI
601: NGNMVNNQVR RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS
701: RQCPCFAADR ECDPDVCRNC WVIGGDGSLG VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE ADKRGKIYDR
801: ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK
901: LA

Arabidopsis Description

CLFHistone-lysine N-methyltransferase CLF [Source:UniProtKB/Swiss-Prot;Acc:P93831]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.