Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_18s0072g00220.t01 | Wine grape | nucleus | 48.35 | 67.3 |
VIT_18s0072g00210.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 48.74 | 66.93 |
KRH35109 | Soybean | nucleus | 61.36 | 65.83 |
CDX88310 | Canola | nucleus | 57.28 | 63.99 |
KRG91687 | Soybean | nucleus | 61.36 | 63.71 |
CDX67669 | Canola | cytosol, nucleus, plastid | 31.26 | 62.65 |
Bra015723.1-P | Field mustard | nucleus | 55.92 | 62.47 |
CDX87571 | Canola | nucleus | 55.92 | 62.47 |
AT1G76710.3 | Thale cress | nucleus | 58.84 | 58.38 |
Solyc07g008460.2.1 | Tomato | nucleus | 50.1 | 57.08 |
PGSC0003DMT400028500 | Potato | nucleus | 43.5 | 55.86 |
PGSC0003DMT400059166 | Potato | nucleus | 32.62 | 55.26 |
GSMUA_Achr10P... | Banana | nucleus | 58.64 | 55.01 |
Solyc07g008580.1.1 | Tomato | nucleus | 29.51 | 54.68 |
TraesCS2A01G302100.1 | Wheat | nucleus | 51.65 | 52.99 |
TraesCS2D01G300800.1 | Wheat | nucleus | 51.46 | 52.79 |
Os04t0429100-01 | Rice | nucleus | 53.01 | 52.7 |
HORVU2Hr1G074910.11 | Barley | cytosol, nucleus | 51.46 | 52.58 |
Solyc09g060000.1.1 | Tomato | nucleus | 26.6 | 52.09 |
EES10812 | Sorghum | nucleus | 52.43 | 51.82 |
Zm00001d003679_P006 | Maize | nucleus | 50.49 | 50.68 |
PGSC0003DMT400028514 | Potato | nucleus | 21.94 | 50.45 |
TraesCS2B01G317900.1 | Wheat | nucleus | 51.46 | 50.09 |
PGSC0003DMT400059198 | Potato | nucleus | 34.56 | 49.72 |
PGSC0003DMT400086207 | Potato | nucleus | 23.3 | 48.19 |
Solyc07g008500.1.1 | Tomato | nucleus | 26.41 | 47.22 |
VIT_16s0022g01290.t01 | Wine grape | cytosol, nucleus, plastid | 3.5 | 33.33 |
VIT_16s0039g00740.t01 | Wine grape | mitochondrion | 18.84 | 21.37 |
VIT_11s0037g00880.t01 | Wine grape | nucleus | 17.09 | 17.81 |
VIT_18s0001g01700.t01 | Wine grape | nucleus | 24.47 | 12.09 |
VIT_07s0031g00320.t01 | Wine grape | nucleus | 13.2 | 7.79 |
VIT_07s0005g01490.t01 | Wine grape | nucleus | 12.23 | 7.28 |
VIT_05s0049g02100.t01 | Wine grape | cytosol | 1.17 | 6.67 |
VIT_15s0046g00760.t01 | Wine grape | nucleus | 12.82 | 6.33 |
VIT_16s0098g00350.t01 | Wine grape | nucleus | 12.04 | 5.75 |
VIT_05s0124g00250.t01 | Wine grape | nucleus | 9.9 | 4.7 |
VIT_04s0008g06180.t01 | Wine grape | nucleus | 10.1 | 4.59 |
VIT_00s0429g00030.t01 | Wine grape | nucleus | 6.6 | 3.07 |
Protein Annotations
KEGG:00310+2.1.1.43 | EntrezGene:100853689 | wikigene:100853689 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | InterPro:AWS_dom |
ProteinID:CCB44894 | ProteinID:CCB44894.1 | ncoils:Coil | UniProt:F6GY58 | EMBL:FN594968 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 |
GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 |
InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR006560 | EntrezGene:LOC100853689 | wikigene:LOC100853689 | PFAM:PF00856 |
PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51215 | PANTHER:PTHR45396 | InterPro:Post-SET_dom | InterPro:SET_dom |
SMART:SM00317 | SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 | UniParc:UPI000198551B | ArrayExpress:VIT_18s0072g00200 |
EnsemblPlantsGene:VIT_18s0072g00200 | EnsemblPlants:VIT_18s0072g00200.t01 | RefSeq:XP_003634540 | RefSeq:XP_003634540.1 | : | : |
Description
No Description!
Coordinates
chr18:-:19242519..19259106
Molecular Weight (calculated)
58020.8 Da
IEP (calculated)
5.096
GRAVY (calculated)
-0.610
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MILIFDFHAP FHGGQDQQIE GLPEYIHINR NDFSYRKHIK QQEEDIAICE CKYDANDPDS ACGEACLNVL TSTECTPGYC RCGLFCKNQR FQKCEYAKTK
101: LFRTEGRGWG LLADENIKAG RFVIEYCGEV ISWKEARGRS QVYASLGLKD AFIISLNGSE CIDATKKGSL GRFINHSCQP NCETRKWTVL GEVRVGIFAK
201: QDISIGTELA YNYNFEWYGG AKVRCLCGAI SCSGFLGAKS RGFQEDTYLW EDGDDRYSVE KIPLYDSAED EPSSKLPRVM DYSKPEFISH GKVEYTTAVD
301: ASVEYDTSVR YEHQLESTEL VVEAVDSVPV DLVINEIKTE VSEETKLFTD GTQQAFPQKN AMIPHIQSNS ASQNNHIGPG HVAKKRSKHF PNGRSKPVAQ
401: KQVDAKFVAQ FLGSEEAREE VFKYEEEKNQ ASSRLDSIYD EIRPAIEEHE RDSQDSVPTE VARKWIGANC SKMKADFNLY SSIIRNIVCN PRKPQGEAKA
501: SEGGDNENET KDLIT
101: LFRTEGRGWG LLADENIKAG RFVIEYCGEV ISWKEARGRS QVYASLGLKD AFIISLNGSE CIDATKKGSL GRFINHSCQP NCETRKWTVL GEVRVGIFAK
201: QDISIGTELA YNYNFEWYGG AKVRCLCGAI SCSGFLGAKS RGFQEDTYLW EDGDDRYSVE KIPLYDSAED EPSSKLPRVM DYSKPEFISH GKVEYTTAVD
301: ASVEYDTSVR YEHQLESTEL VVEAVDSVPV DLVINEIKTE VSEETKLFTD GTQQAFPQKN AMIPHIQSNS ASQNNHIGPG HVAKKRSKHF PNGRSKPVAQ
401: KQVDAKFVAQ FLGSEEAREE VFKYEEEKNQ ASSRLDSIYD EIRPAIEEHE RDSQDSVPTE VARKWIGANC SKMKADFNLY SSIIRNIVCN PRKPQGEAKA
501: SEGGDNENET KDLIT
001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
Arabidopsis Description
ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.