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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_18s0072g00220.t01 Wine grape nucleus 48.35 67.3
VIT_18s0072g00210.t01 Wine grape endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 48.74 66.93
KRH35109 Soybean nucleus 61.36 65.83
CDX88310 Canola nucleus 57.28 63.99
KRG91687 Soybean nucleus 61.36 63.71
CDX67669 Canola cytosol, nucleus, plastid 31.26 62.65
Bra015723.1-P Field mustard nucleus 55.92 62.47
CDX87571 Canola nucleus 55.92 62.47
AT1G76710.3 Thale cress nucleus 58.84 58.38
Solyc07g008460.2.1 Tomato nucleus 50.1 57.08
PGSC0003DMT400028500 Potato nucleus 43.5 55.86
PGSC0003DMT400059166 Potato nucleus 32.62 55.26
GSMUA_Achr10P... Banana nucleus 58.64 55.01
Solyc07g008580.1.1 Tomato nucleus 29.51 54.68
TraesCS2A01G302100.1 Wheat nucleus 51.65 52.99
TraesCS2D01G300800.1 Wheat nucleus 51.46 52.79
Os04t0429100-01 Rice nucleus 53.01 52.7
HORVU2Hr1G074910.11 Barley cytosol, nucleus 51.46 52.58
Solyc09g060000.1.1 Tomato nucleus 26.6 52.09
EES10812 Sorghum nucleus 52.43 51.82
Zm00001d003679_P006 Maize nucleus 50.49 50.68
PGSC0003DMT400028514 Potato nucleus 21.94 50.45
TraesCS2B01G317900.1 Wheat nucleus 51.46 50.09
PGSC0003DMT400059198 Potato nucleus 34.56 49.72
PGSC0003DMT400086207 Potato nucleus 23.3 48.19
Solyc07g008500.1.1 Tomato nucleus 26.41 47.22
VIT_16s0022g01290.t01 Wine grape cytosol, nucleus, plastid 3.5 33.33
VIT_16s0039g00740.t01 Wine grape mitochondrion 18.84 21.37
VIT_11s0037g00880.t01 Wine grape nucleus 17.09 17.81
VIT_18s0001g01700.t01 Wine grape nucleus 24.47 12.09
VIT_07s0031g00320.t01 Wine grape nucleus 13.2 7.79
VIT_07s0005g01490.t01 Wine grape nucleus 12.23 7.28
VIT_05s0049g02100.t01 Wine grape cytosol 1.17 6.67
VIT_15s0046g00760.t01 Wine grape nucleus 12.82 6.33
VIT_16s0098g00350.t01 Wine grape nucleus 12.04 5.75
VIT_05s0124g00250.t01 Wine grape nucleus 9.9 4.7
VIT_04s0008g06180.t01 Wine grape nucleus 10.1 4.59
VIT_00s0429g00030.t01 Wine grape nucleus 6.6 3.07
Protein Annotations
KEGG:00310+2.1.1.43EntrezGene:100853689wikigene:100853689MapMan:12.3.3.4Gene3D:2.170.270.10InterPro:AWS_dom
ProteinID:CCB44894ProteinID:CCB44894.1ncoils:CoilUniProt:F6GY58EMBL:FN594968GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0009987
GO:GO:0016043GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0032259GO:GO:0034968
InterPro:IPR001214InterPro:IPR003616InterPro:IPR006560EntrezGene:LOC100853689wikigene:LOC100853689PFAM:PF00856
PFscan:PS50280PFscan:PS50868PFscan:PS51215PANTHER:PTHR45396InterPro:Post-SET_domInterPro:SET_dom
SMART:SM00317SMART:SM00508SMART:SM00570SUPFAM:SSF82199UniParc:UPI000198551BArrayExpress:VIT_18s0072g00200
EnsemblPlantsGene:VIT_18s0072g00200EnsemblPlants:VIT_18s0072g00200.t01RefSeq:XP_003634540RefSeq:XP_003634540.1::
Description
No Description!
Coordinates
chr18:-:19242519..19259106
Molecular Weight (calculated)
58020.8 Da
IEP (calculated)
5.096
GRAVY (calculated)
-0.610
Length
515 amino acids
Sequence
(BLAST)
001: MILIFDFHAP FHGGQDQQIE GLPEYIHINR NDFSYRKHIK QQEEDIAICE CKYDANDPDS ACGEACLNVL TSTECTPGYC RCGLFCKNQR FQKCEYAKTK
101: LFRTEGRGWG LLADENIKAG RFVIEYCGEV ISWKEARGRS QVYASLGLKD AFIISLNGSE CIDATKKGSL GRFINHSCQP NCETRKWTVL GEVRVGIFAK
201: QDISIGTELA YNYNFEWYGG AKVRCLCGAI SCSGFLGAKS RGFQEDTYLW EDGDDRYSVE KIPLYDSAED EPSSKLPRVM DYSKPEFISH GKVEYTTAVD
301: ASVEYDTSVR YEHQLESTEL VVEAVDSVPV DLVINEIKTE VSEETKLFTD GTQQAFPQKN AMIPHIQSNS ASQNNHIGPG HVAKKRSKHF PNGRSKPVAQ
401: KQVDAKFVAQ FLGSEEAREE VFKYEEEKNQ ASSRLDSIYD EIRPAIEEHE RDSQDSVPTE VARKWIGANC SKMKADFNLY SSIIRNIVCN PRKPQGEAKA
501: SEGGDNENET KDLIT
Best Arabidopsis Sequence Match ( AT1G76710.2 )
(BLAST)
001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
Arabidopsis Description
ASHH1SET domain group 26 [Source:TAIR;Acc:AT1G76710]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.