Factsheet for VIT_16s0022g01290.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0655300-01	Rice	cytosol, nucleus	77.78	80.77
Zm00001d044020_P001	Maize	cytosol	83.33	17.58
Bra003056.1-P	Field mustard	nucleus	85.19	6.36
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	37.04	5.33
GSMUA_Achr2P06290_001	Banana	nucleus	92.59	5.27
VIT_18s0072g00220.t01	Wine grape	nucleus	35.19	5.14
CDX92851	Canola	mitochondrion	87.04	5.13
OQU87254	Sorghum	nucleus	83.33	5.07
Bra040838.1-P	Field mustard	mitochondrion, nucleus	87.04	5.04
GSMUA_Achr8P28030_001	Banana	nucleus	92.59	5.0
VIT_16s0098g00350.t01	Wine grape	nucleus	100.0	5.0
CDY29869	Canola	mitochondrion	87.04	4.91
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	88.89	4.89
KRH64461	Soybean	nucleus	94.44	4.81
CDY35655	Canola	nucleus	85.19	4.72
CDY14381	Canola	nucleus	85.19	4.72
KRH53486	Soybean	nucleus	92.59	4.69
GSMUA_Achr10P...	Banana	nucleus	83.33	4.62
VIT_15s0046g00760.t01	Wine grape	nucleus	88.89	4.61
AT5G53430.1	Thale cress	nucleus	88.89	4.6
AT4G27910.1	Thale cress	nucleus	87.04	4.58
Zm00001d011490_P003	Maize	nucleus	83.33	4.34
TraesCS3D01G237600.2	Wheat	nucleus	79.63	4.21
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	79.63	4.2
TraesCS3B01G265800.1	Wheat	nucleus	79.63	4.18
TraesCS3A01G237200.2	Wheat	nucleus	79.63	4.18
VIT_11s0037g00880.t01	Wine grape	nucleus	35.19	3.85
VIT_16s0039g00740.t01	Wine grape	mitochondrion	31.48	3.74
VIT_18s0072g00200.t01	Wine grape	nucleus	33.33	3.5
VIT_07s0005g01490.t01	Wine grape	nucleus	31.48	1.97
VIT_05s0124g00250.t01	Wine grape	nucleus	37.04	1.85
VIT_07s0031g00320.t01	Wine grape	nucleus	29.63	1.83
VIT_00s0429g00030.t01	Wine grape	nucleus	31.48	1.53
VIT_18s0001g01700.t01	Wine grape	nucleus	27.78	1.44
VIT_04s0008g06180.t01	Wine grape	nucleus	29.63	1.41
VIT_05s0049g02100.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_16s0022g01290	EMBL:FN595506	EnsemblPlants:VIT_16s0022g01290.t01	EnsemblPlantsGene:VIT_16s0022g01290	Gene3D:2.170.270.10	InterPro:IPR003616
InterPro:Post-SET_dom	KEGG:00310+2.1.1.43	PANTHER:PTHR13793	PANTHER:PTHR13793:SF5	PFscan:PS50868	ProteinID:CBI24549
ProteinID:CBI24549.3	SUPFAM:SSF82199	UniParc:UPI00015CE21A	UniProt:D7T259	MapMan:35.1	:

Description

No Description!

Coordinates

chr16:+:13248490..13249645

Molecular Weight (calculated)

6042.1 Da

IEP (calculated)

4.092

GRAVY (calculated)

-0.348

Length

54 amino acids

Sequence
(BLAST)

1: MSVGDDESRI VLIAKTNVAA GDELTYDYLF DPDEPDECKV PCLCKAPNCR KFMN

Best Arabidopsis Sequence Match ( AT5G53430.1 )
(BLAST)

0001: MIIKRKLKTL KRCNSTNEED DIVRKKRKVN LNGGGSGGDY YYPLNLLGEI GAGIVPGKNG FSVSLCKQVS CSPKVEVVEE EEEEEEIKST RLVSRPPLVK
0101: TSRGRVQVLP SRFNDSVIEN WRKDNKSSGE EREEEIEEEA CRKEKVKVSS NHSLKIKQQE TKFTPRNYKY SSSSALCGEI DDEDKCEEIV RYGNSFEMKK
0201: QRYVDDEPRP KKEGVYGPED FYSGDLVWGK SGRNEPFWPA IVIDPMTQAP ELVLRSCIPD AACVMFFGHS GTENERDYAW VRRGMIFPFV DYVERLQEQS
0301: ELRGCNPRDF QMALEEALLA DQGFTEKLMQ DIHMAAGNQT FDDSVYRWVE EAAGSSQYLD HVAPSQDMKK YRNPRACVGC GMVLSFKMAQ KMKALIPGDQ
0401: LLCQPCSKLT KPKHVCGICK RIWNHLDSQS WVRCDGCKVW IHSACDQISH KHFKDLGETD YYCPTCRTKF DFELSDSEKP DSKSKLGKNN APMVLPDKVI
0501: VVCSGVEGIY FPSLHLVVCK CGSCGPERKA LSEWERHTGS KAKNWRTSVK VKSSKLPLEE WMMKLAEFHA NATAAKPPKR PSIKQRKQRL LSFLREKYEP
0601: VNVKWTTERC AVCRWVEDWD YNKIIICNRC QIAVHQECYG TRNVRDFTSW VCKACETPEI KRECCLCPVK GGALKPTDVE TLWVHVTCAW FQPEVCFASE
0701: EKMEPALGIL SIPSSNFVKI CVICKQIHGS CTQCCKCSTY YHAMCASRAG YRMELHCLEK NGRQITKMVS YCSYHRAPNP DTVLIIQTPS GVFSAKSLVQ
0801: NKKKSGTRLI LANREEIEES AAEDTIPIDP FSSARCRLYK RTVNSKKRTK EEGIPHYTGG LRHHPSAAIQ TLNAFRHVAE EPKSFSSFRE RLHHLQRTEM
0901: ERVCFGRSGI HGWGLFARRN IQEGEMVLEY RGEQVRGIIA DLREARYRRE GKDCYLFKIS EEVVVDATEK GNIARLINHS CMPNCYARIM SVGDDESRIV
1001: LIAKTTVASC EELTYDYLFD PDEPDEFKVP CLCKSPNCRK FMN

Arabidopsis Description

ATX5Histone-lysine N-methyltransferase ATX5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.