CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64461	Soybean	nucleus	94.85	95.47
VIT_16s0022g01290.t01	Wine grape	cytosol, nucleus, plastid	4.69	92.59
KRG94193	Soybean	cytosol, nucleus	41.71	83.8
Os01t0655300-01	Rice	cytosol, nucleus	3.75	76.92
CDY29869	Canola	mitochondrion	61.48	68.55
VIT_16s0098g00350.t01	Wine grape	nucleus	69.17	68.4
AT4G27910.1	Thale cress	nucleus	65.7	68.26
AT5G53430.1	Thale cress	nucleus	65.04	66.54
Bra040838.1-P	Field mustard	mitochondrion, nucleus	57.92	66.31
CDY35655	Canola	nucleus	60.45	66.22
CDY14381	Canola	nucleus	60.26	66.02
KRG94170	Soybean	nucleus	29.33	65.76
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	59.42	64.63
CDX92851	Canola	mitochondrion	54.83	63.86
Bra003056.1-P	Field mustard	nucleus	43.21	63.76
GSMUA_Achr10P...	Banana	nucleus	53.23	58.26
GSMUA_Achr2P06290_001	Banana	nucleus	51.64	58.06
Zm00001d044020_P001	Maize	cytosol	13.5	56.25
KRH47912	Soybean	nucleus	51.45	55.51
KRH06474	Soybean	nucleus	51.08	55.22
GSMUA_Achr8P28030_001	Banana	nucleus	50.42	53.85
OQU87254	Sorghum	nucleus	43.95	52.87
KRH68208	Soybean	nucleus	47.42	51.48
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	46.67	50.51
TraesCS3D01G237600.2	Wheat	nucleus	48.36	50.49
TraesCS3B01G265800.1	Wheat	nucleus	48.55	50.39
TraesCS3A01G237200.2	Wheat	nucleus	48.55	50.39
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	48.08	50.05
Zm00001d011490_P003	Maize	nucleus	48.27	49.61
KRH75137	Soybean	cytosol	2.62	22.05
KRH45215	Soybean	nucleus	20.9	20.5
KRH01524	Soybean	nucleus	20.9	20.5
KRH38763	Soybean	cytosol	5.9	18.05
KRH09264	Soybean	nucleus	5.81	17.77
KRH54981	Soybean	plastid	8.62	17.49
KRH77020	Soybean	nucleus	11.34	14.05
KRG96530	Soybean	cytosol, nucleus	8.9	14.01
KRH28444	Soybean	nucleus	11.15	13.82
KRH28654	Soybean	nucleus	8.72	13.29
KRH31789	Soybean	nucleus	10.78	13.22
KRH69214	Soybean	nucleus	10.68	13.13
KRH35109	Soybean	nucleus	5.81	12.92
KRH68267	Soybean	nucleus	9.0	12.9
KRG91687	Soybean	nucleus	5.81	12.5
KRH68336	Soybean	nucleus	9.18	12.04
KRH12193	Soybean	nucleus	11.34	9.87
KRH37214	Soybean	nucleus	11.25	9.78
KRH15817	Soybean	nucleus	14.81	7.87
KRH05241	Soybean	nucleus	14.34	7.53
KRH53306	Soybean	nucleus	10.97	5.74
KRH64610	Soybean	nucleus	11.06	5.66

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100811337	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10
EMBL:ACUP02003467	InterPro:EPHD	EnsemblPlantsGene:GLYMA_06G127800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046872	InterPro:Hist-Lys_N-MeTrfase_ATX
UniProt:I1KAR4	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787
InterPro:IPR025780	InterPro:IPR034732	EnsemblPlants:KRH53486	ProteinID:KRH53486	ProteinID:KRH53486.1	PFAM:PF00628
PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016
PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566	PFscan:PS51805	PANTHER:PTHR13793
PANTHER:PTHR13793:SF5	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249	SMART:SM00317
SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199	TMHMM:TMhelix	UniParc:UPI00023395F1
InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:10494216..10505117

Molecular Weight (calculated)

120901.0 Da

IEP (calculated)

8.515

GRAVY (calculated)

-0.533

Length

1067 amino acids

Sequence
(BLAST)

0001: MIIKRNLKSQ MPSLKRVKLG DSVGENDECS YARKKRKTNN GYYPLNLLGD VAAGVIPVSF HGLLGAAGVV EKGFSAAWCN GVESNVKNEV VVEVKKKNEV
0101: QRPPLVRTSR GRVQVLPSRF NDSVIDNWRK ESKSSSGGLR DCDYDEEFEC KKEKFSFKAP KVCNNNQKKG KSEEKTGSKA RKYSALCNSF ERSKCLSSPG
0201: DGSLALRHSG AAAVEEDDEK GRFLEVEKVG LMGLKEKRNG LFGPEDFYAG DIVWAKAGRK EPFWPAIVID PMTQAPELVL RSCIADAACV MFLGYAGNED
0301: QRDYAWVNHG MIFPFMDYVD RFQGQSELSY YTPSDFQMAI EEAFLAERGF TEKLIADINT AASSNGYDDS ILKAFQKVSG SNQYAGYHFL NQDLFDKKET
0401: RPCEACGLSL PYKMLKKTKD SSPGGQFLCR TCARLTKSKH YCGICKKVWN HSDSGSWVRC DGCKVWVHAE CDKISSNLFK NLEGTDYYCP TCKAKFDFEL
0501: SDSEKPQPKV KWSKNNGQLV LPNRVTVLCN GVEGTYFPSL HSVVCKCGFC GTEKQALSEW ERHTGSKLRN WRTSIRVKDS MLPLEQWMLQ LAEFHATAQV
0601: PAKPKKPSLK ERKQKLLTFL QEKYEPVHAK WTTERCAVCR WVEDWDYNKI IICNRCQIAV HQECYGARNV RDFTSWVCKA CETPDIKREC CLCPVKGGAL
0701: KPTDVDTLWV HVTCAWFRPE VSFASDEKME PALGILSIPS NSFVKICVIC KQIHGSCTQC CKCSTYFHAM CASRAGYRME LHCLEKNGKQ TTKMVSYCAY
0801: HRAPNPDTVL IMQTPLGVIS TKSLLQTKKK SGSRLISSNR RKQDDTPVDN TEHEPFSAAR CRIFQRTNHT KKRAADEAVS HRVRGPYHHP LDAIESLNTH
0901: RVVHEPQAFS SFRERLYHLQ RTENDRVCFG RSGIHGWGLF ARRNIQEGDM VLEYRGEQVR RSIADLREAR YRLEGKDCYL FKISEEVVVD ATDKGNIARL
1001: INHSCMPNCY ARIMSVGDDE SRIVLIAKTN VVAGDELTYD YLFDPDEPEE NKVPCLCKAP NCRKYMN

Best Arabidopsis Sequence Match ( AT5G53430.1 )
(BLAST)

0001: MIIKRKLKTL KRCNSTNEED DIVRKKRKVN LNGGGSGGDY YYPLNLLGEI GAGIVPGKNG FSVSLCKQVS CSPKVEVVEE EEEEEEIKST RLVSRPPLVK
0101: TSRGRVQVLP SRFNDSVIEN WRKDNKSSGE EREEEIEEEA CRKEKVKVSS NHSLKIKQQE TKFTPRNYKY SSSSALCGEI DDEDKCEEIV RYGNSFEMKK
0201: QRYVDDEPRP KKEGVYGPED FYSGDLVWGK SGRNEPFWPA IVIDPMTQAP ELVLRSCIPD AACVMFFGHS GTENERDYAW VRRGMIFPFV DYVERLQEQS
0301: ELRGCNPRDF QMALEEALLA DQGFTEKLMQ DIHMAAGNQT FDDSVYRWVE EAAGSSQYLD HVAPSQDMKK YRNPRACVGC GMVLSFKMAQ KMKALIPGDQ
0401: LLCQPCSKLT KPKHVCGICK RIWNHLDSQS WVRCDGCKVW IHSACDQISH KHFKDLGETD YYCPTCRTKF DFELSDSEKP DSKSKLGKNN APMVLPDKVI
0501: VVCSGVEGIY FPSLHLVVCK CGSCGPERKA LSEWERHTGS KAKNWRTSVK VKSSKLPLEE WMMKLAEFHA NATAAKPPKR PSIKQRKQRL LSFLREKYEP
0601: VNVKWTTERC AVCRWVEDWD YNKIIICNRC QIAVHQECYG TRNVRDFTSW VCKACETPEI KRECCLCPVK GGALKPTDVE TLWVHVTCAW FQPEVCFASE
0701: EKMEPALGIL SIPSSNFVKI CVICKQIHGS CTQCCKCSTY YHAMCASRAG YRMELHCLEK NGRQITKMVS YCSYHRAPNP DTVLIIQTPS GVFSAKSLVQ
0801: NKKKSGTRLI LANREEIEES AAEDTIPIDP FSSARCRLYK RTVNSKKRTK EEGIPHYTGG LRHHPSAAIQ TLNAFRHVAE EPKSFSSFRE RLHHLQRTEM
0901: ERVCFGRSGI HGWGLFARRN IQEGEMVLEY RGEQVRGIIA DLREARYRRE GKDCYLFKIS EEVVVDATEK GNIARLINHS CMPNCYARIM SVGDDESRIV
1001: LIAKTTVASC EELTYDYLFD PDEPDEFKVP CLCKSPNCRK FMN

Arabidopsis Description

ATX5Histone-lysine N-methyltransferase ATX5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.