CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64461	Soybean	nucleus	65.97	29.62
KRH53486	Soybean	nucleus	65.76	29.33
KRH47912	Soybean	nucleus	38.87	18.71
KRH06474	Soybean	nucleus	38.03	18.34
KRH68208	Soybean	nucleus	34.87	16.89
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	34.24	16.53
KRH01524	Soybean	nucleus	13.87	6.07
KRH45215	Soybean	nucleus	13.87	6.07
KRG96530	Soybean	cytosol, nucleus	6.51	4.57
KRH68267	Soybean	nucleus	6.93	4.44
KRH28444	Soybean	nucleus	7.98	4.41
KRH77020	Soybean	nucleus	7.77	4.3
KRH69214	Soybean	nucleus	7.77	4.26
KRH31789	Soybean	nucleus	7.77	4.25
KRH68336	Soybean	nucleus	6.93	4.05
KRH28654	Soybean	nucleus	5.67	3.86
KRH54981	Soybean	plastid	3.78	3.42
KRH12193	Soybean	nucleus	6.72	2.61
KRH37214	Soybean	nucleus	6.51	2.53
KRH15817	Soybean	nucleus	7.35	1.74
KRH53306	Soybean	nucleus	7.35	1.72
KRH64610	Soybean	nucleus	7.35	1.68
KRH05241	Soybean	nucleus	5.88	1.38
KRH38763	Soybean	cytosol	0.42	0.57
KRH09264	Soybean	nucleus	0.21	0.29
KRG91687	Soybean	nucleus	0.0	0.0
KRH35109	Soybean	nucleus	0.0	0.0
KRH75137	Soybean	cytosol	0.0	0.0
KRG94193	Soybean	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:2.30.30.140	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A0R0EV20	EMBL:ACUP02011802	EnsemblPlantsGene:GLYMA_19G0668002
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872
InterPro:IPR000313	InterPro:IPR013083	InterPro:IPR019787	ProteinID:KRG94168.1	ProteinID:KRG94169.1	EnsemblPlants:KRG94170
ProteinID:KRG94170	ProteinID:KRG94170.1	PFAM:PF00628	PFAM:PF00855	PFscan:PS50016	PFscan:PS50812
PANTHER:PTHR13793	PANTHER:PTHR13793:SF5	InterPro:PWWP_dom	SMART:SM00249	SUPFAM:SSF57903	SUPFAM:SSF63748
TMHMM:TMhelix	UniParc:UPI0006ED5B9B	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:18371899..18374930

Molecular Weight (calculated)

53283.7 Da

IEP (calculated)

8.188

GRAVY (calculated)

-0.486

Length

476 amino acids

Sequence
(BLAST)

001: MIIKRNLKSQ MPSLKRRRLG DAAGEDDGDE CTAERKKRRK TSGYCYPLNL LVGVIPASFS GLLGAPEKGC QVAASSEGGK KNGSRPPALV RTSRGRVQAL
101: PSRFNDSVIE DWRKDSSKVE VECELDEEFE SVKKSRKGKI NNKGRGYSTL CEEVLLKNFD DASKEEKKKK EGLYEPEDFY AGDIVWAKAE MKEPFWPAIV
201: IDPICQAPEL VLKSCIPDAA CVMFLGSAGS GNERDYAWVK YGMIFPFMDH VDRFQGQSDL GCYNYNPSEF QISIEEAFLA DQGFTEKLIA DINTAAGRTG
301: CGDSVLKGFQ KVTASNQNAA CHFLNQDLFD KKKDMRSCEV CGFELPFKMS KKMNYLIPGS QFLCKTCARL TKSKHYCGIC KKIWNYSDSG SWVRCDGCKV
401: WVHAECDKIS SNLFKNLGGS DYFCPTCKIK FDFELTDSEK SQPIVKWKKN SGQLVLPNKV TVLCNGMEGT YFPSLH

Best Arabidopsis Sequence Match ( AT3G61740.1 )
(BLAST)

0001: MILKRTLTTF ENQNLKRCKI DSEIEYGRKK GEIIVYKKRQ RATVDQPCSK EPELLTSSSS SLTSKEESQQ VCSDQSKSSR GRVRAVPSRF KDSIVGTWKS
0101: SRRKGESTES SHDDDDVSLG KKVKGFSGSS KLHRSKDSKV FPRKDNGDSS EVDCDYWDVQ ISYDDANFGM PKKSDASRKG VYKPEEFTVG DLVWAKCGKR
0201: FPAWPAVVID PISQAPDGVL KHCVPGAICV MFFGYSKDGT QRDYAWVRQG MVYPFTEFMD KFQDQTNLFN YKASEFNKAL EEAVLAENGN FGDAEIISPD
0301: SSATESDQDY GPASRFQGSY HEDIRTCDGC GSVMPLKSLK RTKDSQPEEL LCKHCSKLRK SNQYCGICKR IWHPSDDGDW VCCDGCDVWV HAECDNITNE
0401: RFKELEHNNY YCPDCKVQHE LTPTILEEQN SVFKSTEKTT ETGLPDAITV VCNGMEGTYI RKFHAIECKC GSCGSRKQSP SEWERHTGCR AKKWKYSVRV
0501: KDTMLPLEKW IAEFSTYTLE TQMLDKQKML SLLEEKYEPV RAKWTTERCA VCRWVEDWEE NKMIICNRCQ VAVHQECYGV SKSQDLTSWV CRACETPDIE
0601: RDCCLCPVKG GALKPSDVEG LWVHVTCAWF RPEVGFLNHE NMEPAVGLFK IPANSFLKVC TICKQTHGSC VHCCKCATHF HAMCASRAGY NMELHCLEKN
0701: GVQRTRKSVY CSFHRKPDPD SVVVVHTPSG VFGSRNLLQN QYGRAKGSRL VLTKKMKLPG FQTQTQAEQS RVFDSLSAAR CRIYSRSNTK IDLEAISHRL
0801: KGPSHHSLSA IENLNSFKAS FSFRAPFMSV FCFLGATFSE YLRKILISIY LVTHQEADFT SFRERLKHLQ RTENFRVCFG KSGIHGWGLF ARKSIQEGEM
0901: IIEYRGVKVR RSVADLREAN YRSQGKDCYL FKISEEIVID ATDSGNIARL INHSCMPNCY ARIVSMGDGE DNRIVLIAKT NVAAGEELTY DYLFEVDESE
1001: EIKVPCLCKA PNCRKFMN

Arabidopsis Description

ATX3Histone-lysine N-methyltransferase ATX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M364]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.