CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06474	Soybean	nucleus	93.73	93.92
Os01t0655300-01	Rice	cytosol, nucleus	4.04	76.92
KRH68208	Soybean	nucleus	64.61	65.01
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	64.0	64.2
KRG94193	Soybean	cytosol, nucleus	33.87	63.09
VIT_15s0046g00760.t01	Wine grape	nucleus	60.77	57.68
CDY25072	Canola	nucleus	56.12	56.81
CDX67860	Canola	nucleus	54.6	56.02
AT3G61740.1	Thale cress	nucleus	57.13	55.5
Solyc01g095890.2.1	Tomato	nucleus	58.34	55.06
GSMUA_Achr10P...	Banana	nucleus	52.98	53.74
KRH64461	Soybean	nucleus	55.61	51.89
GSMUA_Achr2P06290_001	Banana	nucleus	49.65	51.74
KRH53486	Soybean	nucleus	55.51	51.45
Zm00001d044020_P001	Maize	cytosol	13.14	50.78
OQU87254	Sorghum	nucleus	45.2	50.39
PGSC0003DMT400023546	Potato	nucleus	35.39	49.72
GSMUA_Achr8P28030_001	Banana	nucleus	49.95	49.45
Bra003467.1-P	Field mustard	nucleus	51.67	49.37
Zm00001d011490_P003	Maize	nucleus	48.84	46.53
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	47.62	45.95
TraesCS3B01G265800.1	Wheat	nucleus	47.73	45.91
TraesCS3D01G237600.2	Wheat	nucleus	47.42	45.89
TraesCS3A01G237200.2	Wheat	nucleus	47.62	45.82
KRG94170	Soybean	nucleus	18.71	38.87
KRH45215	Soybean	nucleus	24.17	21.97
KRH01524	Soybean	nucleus	23.96	21.78
KRH75137	Soybean	cytosol	2.53	19.68
KRH38763	Soybean	cytosol	6.47	18.34
KRH09264	Soybean	nucleus	6.37	18.05
KRH54981	Soybean	plastid	8.49	15.97
KRH28654	Soybean	nucleus	9.1	12.86
KRG96530	Soybean	cytosol, nucleus	8.8	12.83
KRH35109	Soybean	nucleus	6.07	12.5
KRH68267	Soybean	nucleus	9.1	12.1
KRG91687	Soybean	nucleus	6.07	12.1
KRH77020	Soybean	nucleus	10.52	12.08
KRH28444	Soybean	nucleus	10.41	11.96
KRH69214	Soybean	nucleus	9.81	11.18
KRH31789	Soybean	nucleus	9.81	11.15
KRH68336	Soybean	nucleus	8.8	10.69
KRH12193	Soybean	nucleus	11.93	9.62
KRH37214	Soybean	nucleus	11.73	9.45
KRH05241	Soybean	nucleus	16.08	7.82
KRH15817	Soybean	nucleus	15.87	7.82
KRH53306	Soybean	nucleus	9.71	4.71
KRH64610	Soybean	nucleus	9.91	4.7

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100793624	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10
EMBL:ACUP02004183	InterPro:EPHD	EnsemblPlantsGene:GLYMA_07G056000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046872	InterPro:Hist-Lys_N-MeTrfase_ATX
UniProt:I1KHV6	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787
InterPro:IPR025780	InterPro:IPR034732	EnsemblPlants:KRH47912	ProteinID:KRH47912	ProteinID:KRH47912.1	PFAM:PF00628
PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016
PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566	PFscan:PS51805	PANTHER:PTHR13793
PANTHER:PTHR13793:SF92	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249	SMART:SM00293
SMART:SM00317	SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199	UniParc:UPI000295ACF2
InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:4953958..4962304

Molecular Weight (calculated)

111354.0 Da

IEP (calculated)

7.850

GRAVY (calculated)

-0.414

Length

989 amino acids

Sequence
(BLAST)

001: MIVKRTMKTE TPNLKRCKIE DSENAIQKKR RVTGFYSLGV PGEAEYFSSC SGSWSSEGSY WGGGGGGGEV QSNSNSVLFN RKTAKEACLP PLLRSSRGRA
101: QKLPSRFNDS VLDAADGDLS FEDNDKSFVE DGKGGIGVKE EKSDSVCYSS SVGKRTVVKA ESNTSGISFE GVDQKPVGEK RREVYKPEDF ALGDIVWAKC
201: GKRYPAWPAV VIDPVLEAPE SVLSCCVPGA LCVMFFGYSK NGTQRDYAWV KQGTVFPFSE FMDRFQGQTR LYKSKPSDFR MALEEAMLAE DGVLESHLGR
301: EELTGVDAHP DGLMEATVSY VDGECYGQDQ DTRCCAGCGL MFPCKTMKKI KDSNGAPQFC CKYCSKLRKS KQYCGICKRI WHHSDGGNWV CCDGCNVWVH
401: AECDKISSKV FKDLENTDYY CPDCKGKFNC KLPASQTYKS NIELIENSQK SMIPEKVLVV CNGMEGFYIP KLHLVMCKCG SCGSRKQTLS EWEKHTGCRS
501: KKWKHSVKVK STMLPLEKWM EENIPLDGIP EQLDQQQVLA FLQEKYEPVN VKWTTERCAV CRWVEDWEDN KIIICNRCQI AVHQECYGAK NVQDFTSWVC
601: RVCETPDVER ECCLCPVKGG ALKPTDVEML WVHVTCAWFR PQVVFQNHEA MEPAMGILKI PPNSFVKTCV ICKQSHGSCI SCCKCSTYFH VMCASRAGYT
701: MELHSMEKNG TQVTRKLIYC AIHRVPNPDS VLVVHTPLGI FSPRTSLQNQ KGCFRGSRLI LSKNIELNES STTENDLVEP LSAARCRVYR RSPNKRADVP
801: IIHLLGGPSL HSLGAITQLN IFKDADESKV FTSFKERLHH LWETEKFRVC FGKSGIHGWG LFARRDIQEG EMVVEYRGVH VRRSVADLRE EKYRSEGKDC
901: YLFKISEEVV VDATNRGNIA RLINHSCMPN CYARIMSLGD QGSRIVLIAK TNVSAGEELT YDYLFDPDER DELKVPCLCK APNCRRFMN

Best Arabidopsis Sequence Match ( AT3G61740.2 )
(BLAST)

001: MILKRTLTTF ENQNLKRCKI DSEIEYGRKK GEIIVYKKRQ RATVDQPCSK EPELLTSSSS SLTSKEESQQ VCSDQSKSSR GRVRAVPSRF KDSIVGTWKS
101: SRRKGESTES SHDDDDVSLG KKVKGFSGSS KLHRSKDSKV FPRKDNGDSS EVDCDYWDVQ ISYDDANFGM PKKSDASRKG VYKPEEFTVG DLVWAKCGKR
201: FPAWPAVVID PISQAPDGVL KHCVPGAICV MFFGYSKDGT QRDYAWVRQG MVYPFTEFMD KFQDQTNLFN YKASEFNKAL EEAVLAENGN FGDAEIISPD
301: SSATESDQDY GPASRFQGSY HEDIRTCDGC GSVMPLKSLK RTKDSQPEEL LCKHCSKLRK SNQYCGICKR IWHPSDDGDW VCCDGCDVWV HAECDNITNE
401: RFKELEHNNY YCPDCKVQHE LTPTILEEQN SVFKSTEKTT ETGLPDAITV VCNGMEGTYI RKFHAIECKC GSCGSRKQSP SEWERHTGCR AKKWKYSVRV
501: KDTMLPLEKW IAEFSTYTLE TQMLDKQKML SLLEEKYEPV RAKWTTERCA VCRWVEDWEE NKMIICNRCQ VAVHQECYGV SKSQDLTSWV CRACETPDIE
601: RDCCLCPVKG GALKPSDVEG LWVHVTCAWF RPEVGFLNHE NMEPAVGLFK IPANSFLKVC TICKQTHGSC VHCCKCATHF HAMCASRAGY NMELHCLEKN
701: GVQRTRKSVY CSFHRKPDPD SVVVVHTPSG VFGSRNLLQN QYGRAKGSRL VLTKKMKLPG FQTQTQAEQS RVFDSLSAAR CRIYSRSNTK KIDLEAISHR
801: LKGPSHHSLS AIENLNSFKE ADFTSFRERL KHLQRTENFR VCFGKSGIHG WGLFARKSIQ EGEMIIEYRG VKVRRSVADL REANYRSQGK DCYLFKISEE
901: IVIDATDSGN IARLINHSCM PNCYARIVSM GDGEDNRIVL IAKTNVAAGE ELTYDYLFEV DESEEIKVPC LCKAPNCRKF MN

Arabidopsis Description

ATX3Histone-lysine N-methyltransferase ATX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M364]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.