Factsheet for Solyc01g095890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0655300-01	Rice	cytosol, nucleus	4.01	80.77
VIT_15s0046g00760.t01	Wine grape	nucleus	58.4	58.73
KRH47912	Soybean	nucleus	55.06	58.34
KRH06474	Soybean	nucleus	54.48	57.85
Solyc03g112690.1.1	Tomato	nucleus	34.45	56.06
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	50.0	53.41
GSMUA_Achr10P...	Banana	nucleus	49.62	53.33
KRH68208	Soybean	nucleus	49.24	52.49
KRG96460	Soybean	cytosol, mitochondrion, nucleus, plastid	49.24	52.33
GSMUA_Achr2P06290_001	Banana	nucleus	47.23	52.16
CDY25072	Canola	nucleus	48.57	52.1
CDX67860	Canola	nucleus	47.42	51.56
AT3G61740.1	Thale cress	nucleus	49.52	50.98
PGSC0003DMT400023546	Potato	nucleus	33.59	50.0
Zm00001d044020_P001	Maize	cytosol	12.12	49.61
OQU87254	Sorghum	nucleus	41.98	49.61
GSMUA_Achr8P28030_001	Banana	nucleus	46.47	48.75
TraesCS3D01G237600.2	Wheat	nucleus	45.23	46.38
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	45.32	46.34
Zm00001d011490_P003	Maize	nucleus	45.9	46.34
TraesCS3B01G265800.1	Wheat	nucleus	45.32	46.21
TraesCS3A01G237200.2	Wheat	nucleus	45.32	46.21
Bra003467.1-P	Field mustard	nucleus	44.75	45.31
Solyc09g098260.1.1	Tomato	nucleus	15.08	26.87
Solyc07g006060.2.1	Tomato	nucleus	5.92	25.2
Solyc07g008580.1.1	Tomato	nucleus	6.01	22.66
Solyc09g060000.1.1	Tomato	nucleus	5.34	21.29
Solyc07g008500.1.1	Tomato	nucleus	5.25	19.1
Solyc02g093200.2.1	Tomato	endoplasmic reticulum, vacuole	6.97	15.77
Solyc07g008460.2.1	Tomato	nucleus	6.58	15.27
Solyc12g100290.1.1	Tomato	nucleus	5.63	13.59
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	5.82	13.53
Solyc03g044380.2.1	Tomato	nucleus	10.4	11.84
Solyc01g079390.2.1	Tomato	nucleus	9.16	11.58
Solyc09g098250.2.1	Tomato	nucleus	6.97	9.91
Solyc02g093190.2.1	Tomato	nucleus	2.29	7.12
Solyc01g006880.2.1	Tomato	nucleus	10.78	7.08
Solyc04g057880.2.1	Tomato	nucleus	8.78	6.59
Solyc06g059960.2.1	Tomato	nucleus	9.16	5.77

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140	Gene3D:3.30.40.10	InterPro:EPHD
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	GO:GO:0046872	GO:GO:0051571	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214
InterPro:IPR003616	InterPro:IPR013083	InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	UniProt:K4AZX8
PFAM:PF00628	PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359
PFscan:PS50016	PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566	PFscan:PS51805
PANTHER:PTHR13793	PANTHER:PTHR13793:SF92	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249
SMART:SM00293	SMART:SM00317	SMART:SM00508	SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199
EnsemblPlantsGene:Solyc01g095890.2	EnsemblPlants:Solyc01g095890.2.1	UniParc:UPI0002767500	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD
InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

Histone-lysine N-methyltransferase ATX3 [Source:Projected from Arabidopsis thaliana (AT3G61740) UniProtKB/Swiss-Prot;Acc:Q9M364]

Coordinates

chr1:-:87014259..87026437

Molecular Weight (calculated)

118378.0 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.468

Length

1048 amino acids

Sequence
(BLAST)

0001: MVKRTVKVEM PKLKRCKAEG NDSGGEGESC SASPKKLKTD ELFTVPIREL EDYRTSLVDS FCREALSYAG EVESSLVLAG ASRSLDKALE VSNNKPPLLK
0101: SSRGRIQVLP SKFNDSVLPS WRKEENQEEQ ELLCLNEKDE EAVLPRKKRF KLERSNVDIH FFKNQLIHLP SSIKIQDREF SSMQSKDCSR SSVTSIGDGG
0201: SSVVVESGEC KLRVKRGTVR ADNFTKEKVG KKKDFFEPAD FVSGDIVWAK CGKNYPAWPA VVIDPLCEAP EAVLRACVPG TICVMFYGYS RSGQRDYGWV
0301: KAGMIFPFQE YMDRFQEQTK LYGSRPSDFQ MAIEEAILAE HGYTNKCPEM EQEASPATND SGVEEATGSN QELEFCFSDQ DGYDKRKDTR PCDSCGLVVL
0401: RRTLKKVKDK MSKAQFSCEH CTKLKKSKQY CGICKKIWHH SDGGNWVCCD GCDVWVHVEC TDISSNALKN LQNTDYFCPK CKGISNKKLL GSVQGGPKAR
0501: LRESSGSVMP DKITVVCTGV EGIYYPDIHL VQCKCGSCGI RKQTLSEWEK HTGCRAKKWK CSVKVKGSMI TLEQWLSDNN AHNVSYQKLD QQQLFAFLRE
0601: KYEPVHAKWT TERCAICRWV EDWDYNKIII CNRCQIAVHQ ECYGVSNGQD FASWVCRACE TPEIERECCL CPVKGGALKP TDIDSLWVHV TCAWFRPEVA
0701: FHNADKMEPA AGLLRIPPNT FLKACVICKQ VHGSCTQCCK CATSFHAMCA LRAGYHMELN CSEKNGIQIT RWLSYCAFHR TPDTDNVLVM RTPFGVFSTK
0801: SLVERQSQEH CSGGKRLISS KTLELPDASD AGRSSFEPLS AARCRVFQRS SYKRAGQEAV FHRLMGPRRH SLEAIDCLSA QELTRDVKAF STLKERLIHL
0901: QMMENRRVCF GKSGIHGWGL FARRSIQEGE MVLEYRGEKV RRSVADLREA RYRLEGKDCY LFKVSEEVVI DATNKGNIAR LINHSCMPSC YARILSLGEE
1001: ESRIVLIAKR NVSAGDELTY DYLFDPDEHD DVKVPCLCGA PNCRKFMN

Best Arabidopsis Sequence Match ( AT4G27910.1 )
(BLAST)

0001: MIIKRKFKTQ IPSLERCKLG NESRKKKRKL NLGGGGYYYP LNLLGEIAAG IVPGNGRNGF SASWCTEVTK PVEVEESLSK RRSDSGTVRD SPPAEVSRPP
0101: LVRTSRGRIQ VLPSRFNDSV LDNWRKDSKS DCDLEEEEIE CRNEKVVSFR VPKATNLKSK ELDRKSKYSA LCKEERFHEQ HNDEARARVD EKLPNKKGTF
0201: GPENFYSGDL VWAKSGRNEP FWPAIVIDPM TQAPELVLRS CIPDAACVVF FGHSGNENER DYAWVRRGMI FPFVDYVARF QEQPELQGCK PGNFQMALEE
0301: AFLADQGFTE KLMHDIHLAA GNSTFDDSFY RWIQETAVSN QELNNNAPRQ GLLKKHRNPL ACAGCETVIS FEMAKKMKDL IPGDQLLCKP CSRLTKSKHI
0401: CGICKKIRNH LDNKSWVRCD GCKVRIHAEC DQISDRHLKD LRETDYYCPT CRAKFNFDLS DSEKQNSKSK VAKGDGQMVL PDKVIVVCAG VEGVYFPRLH
0501: LVVCKCGSCG PKKKALSEWE RHTGSKSKNW KTSVKVKSSK LALEDWMMNL AELHANATAA KVPKRPSIKQ RKQRLLAFLS ETYEPVNAKW TTERCAVCRW
0601: VEDWDYNKII ICNRCQIAVH QECYGARHVR DFTSWVCKAC ERPDIKRECC LCPVKGGALK PTDVETLWVH VTCAWFQPEV CFASEEKMEP AVGILSIPST
0701: NFVKICVICK QIHGSCTQCC KCSTYYHAMC ASRAGYRMEL HCLEKNGQQI TKMVSYCAYH RAPNPDNVLI IQTPSGAFSA KSLVQNKKKG GSRLISLIRE
0801: DDEAPAENTI TCDPFSAARC RVFKRKINSK KRIEEEAIPH HTRGPRHHAS AAIQTLNTFR HVPEEPKSFS SFRERLHHLQ RTEMDRVCFG RSGIHGWGLF
0901: ARRNIQEGEM VLEYRGEQVR GSIADLREAR YRRVGKDCYL FKISEEVVVD ATDKGNIARL INHSCTPNCY ARIMSVGDEE SRIVLIAKAN VAVGEELTYD
1001: YLFDPDEAEE LKVPCLCKAP NCRKFMN

Arabidopsis Description

ATX4Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UVA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.