Factsheet for VIT_16s0098g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g01290.t01	Wine grape	cytosol, nucleus, plastid	5.0	100.0
Os01t0655300-01	Rice	cytosol, nucleus	3.89	80.77
KRH64461	Soybean	nucleus	68.12	69.34
KRH53486	Soybean	nucleus	68.4	69.17
Solyc03g083410.2.1	Tomato	mitochondrion, nucleus	61.08	67.18
CDY29869	Canola	mitochondrion	59.04	66.56
Bra040838.1-P	Field mustard	mitochondrion, nucleus	55.98	64.81
AT4G27910.1	Thale cress	nucleus	61.26	64.36
CDY35655	Canola	nucleus	57.83	64.07
CDY14381	Canola	nucleus	57.55	63.76
AT5G53430.1	Thale cress	nucleus	60.7	62.8
CDX92851	Canola	mitochondrion	53.2	62.66
Bra003056.1-P	Field mustard	nucleus	41.33	61.69
VIT_15s0046g00760.t01	Wine grape	nucleus	58.67	60.75
GSMUA_Achr2P06290_001	Banana	nucleus	53.01	60.27
GSMUA_Achr10P...	Banana	nucleus	53.2	58.87
Zm00001d044020_P001	Maize	cytosol	13.44	56.64
GSMUA_Achr8P28030_001	Banana	nucleus	52.27	56.46
OQU87254	Sorghum	nucleus	44.11	53.66
TraesCS3B01G265800.1	Wheat	nucleus	48.19	50.58
TraesCS3D01G237600.2	Wheat	nucleus	47.82	50.49
Zm00001d011490_P003	Maize	nucleus	48.56	50.48
TraesCS3A01G237200.2	Wheat	nucleus	48.01	50.39
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	47.64	50.15
VIT_05s0124g00250.t01	Wine grape	nucleus	21.78	21.68
VIT_18s0072g00220.t01	Wine grape	nucleus	6.3	18.38
VIT_11s0037g00880.t01	Wine grape	nucleus	7.88	17.21
VIT_18s0072g00210.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	5.84	16.8
VIT_16s0039g00740.t01	Wine grape	mitochondrion	5.93	14.1
VIT_07s0031g00320.t01	Wine grape	nucleus	10.47	12.94
VIT_07s0005g01490.t01	Wine grape	nucleus	9.82	12.25
VIT_18s0072g00200.t01	Wine grape	nucleus	5.75	12.04
VIT_04s0008g06180.t01	Wine grape	nucleus	11.58	11.03
VIT_00s0429g00030.t01	Wine grape	nucleus	6.12	5.95
VIT_18s0001g01700.t01	Wine grape	nucleus	5.65	5.85
VIT_05s0049g02100.t01	Wine grape	cytosol	0.37	4.44

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100246975	wikigene:100246975	MapMan:12.3.3.5	Gene3D:2.170.270.10	Gene3D:2.30.30.140
Gene3D:3.30.40.10	ProteinID:CBI24549	ProteinID:CBI24549.3	ProteinID:CCB48129	ProteinID:CCB48129.1	InterPro:EPHD
UniProt:F6H7C9	EMBL:FN595247	EMBL:FN595506	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
GO:GO:0046872	InterPro:Hist-Lys_N-MeTrfase_ATX	InterPro:IPR000313	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR013083
InterPro:IPR019787	InterPro:IPR025780	InterPro:IPR034732	EntrezGene:LOC100246975	wikigene:LOC100246975	PFAM:PF00628
PFAM:PF00855	PFAM:PF00856	PFAM:PF13831	PFAM:PF13832	ScanProsite:PS01359	PFscan:PS50016
PFscan:PS50280	PFscan:PS50812	PFscan:PS50868	PFscan:PS51566	PFscan:PS51805	PANTHER:PTHR13793
PANTHER:PTHR13793:SF5	InterPro:PWWP_dom	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00249	SMART:SM00317
SUPFAM:SSF57903	SUPFAM:SSF63748	SUPFAM:SSF82199	TMHMM:TMhelix	UniParc:UPI000210815C	ArrayExpress:VIT_16s0098g00350
EnsemblPlantsGene:VIT_16s0098g00350	EnsemblPlants:VIT_16s0098g00350.t01	RefSeq:XP_002268525	RefSeq:XP_002268525.2	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD
InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H7C9]

Coordinates

chr16:-:20769708..20783973

Molecular Weight (calculated)

121737.0 Da

IEP (calculated)

8.325

GRAVY (calculated)

-0.507

Length

1079 amino acids

Sequence
(BLAST)

0001: MIIKRNLKSK MPSMKRCRLG HSAADDDESP AAKKKRKMNG YFPLNLLGDV AAGIIPLSGY GLQRIFGGHV GDDGDGVGAM NRAAQVHRPP LVRTSRGRVQ
0101: VLPSRFNDSI LDNWRKESKP NAREIILDED FEPEKEKPCS KTPKQSVKKG LNEGKFGHQC RKFSALCQED GDEMGYVGFK NVGTKKKYSS SRSSLTSLHE
0201: QLAEVERYPT DEVEEKFGLG RVDRESKGGS RLEEFISGDI VWAKSGKKDP FWPAIVIDPT SQAPGQVLSS CIAGAVCVMF FGYSGNGSRD YGWIKRGMIF
0301: SFIDNVERFQ GQSDLNDCKP SDFRTAIEEA FLAENGFIEK LTEDINVASG KPNYLESTRG IQEATGSNQD QECDSQDQAS GDVFRKKDTW SCDGCGLRIP
0401: LKSTKKMKVL TPKGRFLCKT CDRLLKSKQY CGICKKMQNQ SDSGTWVRCD GCKVWVHAEC GKISSKLFKN LGATDYYCPA CKAKFNFELS DSERWQPKVK
0501: CNKNNSQLVL PNKVTVTCSG VEGIYFPSIH LVVCKCGSCG MEKQSLTEWE RHTGSKGKNW KTSVRVKGSM LSLEQWMLQV AEYHDNSFLA VNPPKRPSIR
0601: ERRQKLLTFL QDTLEAAVTD ESTDCIPTSV VTEKYEPVHA RWTTERCAVC RWVEDWDYNK IIICNRCQIA VHQECYGARN VRDFTSWVCR ACETPDVERE
0701: CCLCPVKGGA LKPTDIETLW VHVTCAWFQP EVSFSSDEKM EPAVGILSIP SNSFIKICVI CKQIHGSCTQ CCKCSTYYHA MCASRAGYRM ELHSLVKNGR
0801: QITKMVSYCA YHRAPNPDTV LIIQTPLGVF STKSLIQNKK KSGSRLISSN RIELQQIPTV ETDEFEPFSA ARCRIFRRSK SNTKRTVEEA IAHQVKGPFH
0901: HSLSAIESLN IFREVEEPKN FSTFRERLYH LQRTENDRVC FGRSGIHGWG LFARQAIQEG DMVLEYRGEQ VRRSIADMRE VRYRLEGKDC YLFKISEEVV
1001: VDATDKGNIA RLINHSCAPN CYARIMSVGD DESRIVLIAK TNVAAGDELT YDYLFDPDEP DECKVPCLCK APNCRKFMN

Best Arabidopsis Sequence Match ( AT4G27910.1 )
(BLAST)

0001: MIIKRKFKTQ IPSLERCKLG NESRKKKRKL NLGGGGYYYP LNLLGEIAAG IVPGNGRNGF SASWCTEVTK PVEVEESLSK RRSDSGTVRD SPPAEVSRPP
0101: LVRTSRGRIQ VLPSRFNDSV LDNWRKDSKS DCDLEEEEIE CRNEKVVSFR VPKATNLKSK ELDRKSKYSA LCKEERFHEQ HNDEARARVD EKLPNKKGTF
0201: GPENFYSGDL VWAKSGRNEP FWPAIVIDPM TQAPELVLRS CIPDAACVVF FGHSGNENER DYAWVRRGMI FPFVDYVARF QEQPELQGCK PGNFQMALEE
0301: AFLADQGFTE KLMHDIHLAA GNSTFDDSFY RWIQETAVSN QELNNNAPRQ GLLKKHRNPL ACAGCETVIS FEMAKKMKDL IPGDQLLCKP CSRLTKSKHI
0401: CGICKKIRNH LDNKSWVRCD GCKVRIHAEC DQISDRHLKD LRETDYYCPT CRAKFNFDLS DSEKQNSKSK VAKGDGQMVL PDKVIVVCAG VEGVYFPRLH
0501: LVVCKCGSCG PKKKALSEWE RHTGSKSKNW KTSVKVKSSK LALEDWMMNL AELHANATAA KVPKRPSIKQ RKQRLLAFLS ETYEPVNAKW TTERCAVCRW
0601: VEDWDYNKII ICNRCQIAVH QECYGARHVR DFTSWVCKAC ERPDIKRECC LCPVKGGALK PTDVETLWVH VTCAWFQPEV CFASEEKMEP AVGILSIPST
0701: NFVKICVICK QIHGSCTQCC KCSTYYHAMC ASRAGYRMEL HCLEKNGQQI TKMVSYCAYH RAPNPDNVLI IQTPSGAFSA KSLVQNKKKG GSRLISLIRE
0801: DDEAPAENTI TCDPFSAARC RVFKRKINSK KRIEEEAIPH HTRGPRHHAS AAIQTLNTFR HVPEEPKSFS SFRERLHHLQ RTEMDRVCFG RSGIHGWGLF
0901: ARRNIQEGEM VLEYRGEQVR GSIADLREAR YRRVGKDCYL FKISEEVVVD ATDKGNIARL INHSCTPNCY ARIMSVGDEE SRIVLIAKAN VAVGEELTYD
1001: YLFDPDEAEE LKVPCLCKAP NCRKFMN

Arabidopsis Description

ATX4Histone-lysine N-methyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UVA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.