Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67818 | Canola | nucleus | 96.88 | 96.88 |
| Bra003396.1-P | Field mustard | cytosol | 72.27 | 89.58 |
| AT3G59960.1 | Thale cress | nucleus | 66.36 | 64.74 |
| CDY41194 | Canola | nucleus | 69.47 | 64.27 |
| CDX71856 | Canola | nucleus | 68.85 | 61.39 |
| CDX79778 | Canola | cytosol | 55.14 | 48.49 |
| CDY17880 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 56.39 | 48.01 |
| CDX95590 | Canola | nucleus | 54.52 | 47.95 |
| CDX83438 | Canola | cytosol | 53.27 | 46.34 |
| GSMUA_Achr2P12180_001 | Banana | nucleus | 50.78 | 43.7 |
| PGSC0003DMT400010951 | Potato | cytosol | 30.84 | 43.04 |
| Os09t0307800-01 | Rice | cytosol | 43.93 | 41.47 |
| KRH75137 | Soybean | cytosol | 16.2 | 40.94 |
| TraesCS7A01G453700.1 | Wheat | nucleus | 42.68 | 40.53 |
| VIT_16s0039g00740.t01 | Wine grape | mitochondrion | 56.7 | 40.09 |
| TraesCS7B01G354300.1 | Wheat | nucleus | 42.37 | 40.0 |
| TraesCS7D01G443000.1 | Wheat | nucleus | 42.06 | 39.94 |
| TraesCS5D01G184500.1 | Wheat | nucleus | 43.61 | 39.44 |
| Solyc12g100290.1.1 | Tomato | nucleus | 53.27 | 39.4 |
| TraesCS5B01G177800.2 | Wheat | nucleus | 43.3 | 38.4 |
| TraesCS5A01G179900.1 | Wheat | nucleus | 43.3 | 38.4 |
| Zm00001d005563_P006 | Maize | nucleus | 40.5 | 38.35 |
| Solyc01g006220.2.1 | Tomato | endoplasmic reticulum | 52.96 | 37.69 |
| HORVU5Hr1G054880.2 | Barley | mitochondrion | 43.3 | 36.29 |
| Zm00001d020038_P001 | Maize | nucleus | 40.19 | 36.24 |
| OQU89246 | Sorghum | nucleus | 40.19 | 34.58 |
| HORVU7Hr1G103420.7 | Barley | nucleus | 42.06 | 32.69 |
| CDX67669 | Canola | cytosol, nucleus, plastid | 19.31 | 24.12 |
| CDY36467 | Canola | nucleus | 34.27 | 22.22 |
| CDY23260 | Canola | nucleus | 33.02 | 21.46 |
| CDX88310 | Canola | nucleus | 26.17 | 18.22 |
| CDX87571 | Canola | nucleus | 26.17 | 18.22 |
| CDY15252 | Canola | nucleus | 16.2 | 11.74 |
| CDX95185 | Canola | endoplasmic reticulum, nucleus | 17.76 | 11.66 |
| CDX89960 | Canola | nucleus | 16.2 | 8.15 |
| CDY32472 | Canola | nucleus | 16.2 | 8.09 |
| CDY37467 | Canola | nucleus | 16.2 | 7.83 |
| CDY22021 | Canola | nucleus | 19.0 | 7.16 |
| CDY07102 | Canola | nucleus | 19.0 | 7.13 |
| CDY38942 | Canola | nucleus, plastid | 19.94 | 7.06 |
| CDX89569 | Canola | nucleus, plastid | 19.63 | 6.92 |
| CDX92851 | Canola | mitochondrion | 19.31 | 6.77 |
| CDY29869 | Canola | mitochondrion | 19.94 | 6.69 |
| CDX67860 | Canola | nucleus | 18.38 | 6.12 |
| CDY25072 | Canola | nucleus | 18.38 | 6.04 |
| CDY19078 | Canola | nucleus | 19.0 | 5.92 |
| CDY15398 | Canola | nucleus | 19.0 | 5.9 |
| CDY17381 | Canola | nucleus | 14.95 | 5.71 |
| CDX88357 | Canola | nucleus | 29.28 | 5.67 |
| CDX87527 | Canola | nucleus | 29.28 | 5.67 |
| CDY06182 | Canola | nucleus | 18.69 | 5.65 |
| CDY14381 | Canola | nucleus | 17.13 | 5.65 |
| CDY35655 | Canola | nucleus | 17.13 | 5.65 |
| CDY10007 | Canola | nucleus | 18.38 | 5.3 |
| CDY52297 | Canola | nucleus | 19.31 | 4.81 |
| CDX95184 | Canola | cytosol | 5.3 | 1.51 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | GO:A0A078E8H1 | InterPro:AWS_dom | EnsemblPlants:CDX98400 |
| ProteinID:CDX98400 | ProteinID:CDX98400.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00105984001 | InterPro:Hist-Lys_N-MeTrfase_SET2_plant | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR006560 | InterPro:IPR025787 |
| PFAM:PF00856 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51215 | PFscan:PS51578 | PANTHER:PTHR22884 |
| InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 |
| UniParc:UPI0004EE4F49 | SEG:seg | : | : | : | : |
Description
BnaC06g17610D
Coordinates
chrLK031904:+:1105594..1108029
Molecular Weight (calculated)
36673.2 Da
IEP (calculated)
9.289
GRAVY (calculated)
-0.666
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQVGDYSKR YLAMVTAKNK GSGRNQIKKG FRKFSKQMEG SEKLKSPDRL NKRKPAFIKR NIYLKEKFKK TINKDHGIFC SCSSSSGSST LCGKNCNCEL
101: LLSSCSPSCP CRCECTNKPF QQRHIKKMKI VQTEKCGYGI VADEDINSGE FIIEYVGEVI DNEICEQRLW KLKHKVETNF YLCQINNNLL VDATYKGNKS
201: RYFNHSCDPN TVMQKWMIDG ETRLGIFATR DINKGEHLTY DYQKYSRLVQ FGEDQDCHCG AVCCKKKLGA KTSKTKNILS DENVNLTACK AVTRKRPKVT
301: YEDGVTETID MSGEVWKLIT V
101: LLSSCSPSCP CRCECTNKPF QQRHIKKMKI VQTEKCGYGI VADEDINSGE FIIEYVGEVI DNEICEQRLW KLKHKVETNF YLCQINNNLL VDATYKGNKS
201: RYFNHSCDPN TVMQKWMIDG ETRLGIFATR DINKGEHLTY DYQKYSRLVQ FGEDQDCHCG AVCCKKKLGA KTSKTKNILS DENVNLTACK AVTRKRPKVT
301: YEDGVTETID MSGEVWKLIT V
001: MSSSKKGSDR NQIRKSLRKL KKQIGELEKL ESPDRLNNVK PIFIKRNIYL KKKLKKKVKD HGIFCSCSLD PGSSTLCGSD CNCGILLSSC SSSCKCSSEC
101: TNKPFQQRHI KKMKLVQTEK CGYGIVADED INSGEFIIEY VGEVIDDKIC EERLWKLNHK VETNFYLCQI NWNMVIDATH KGNKSRYINH SCSPNTEMQK
201: WIIDGETRIG IFATRFINKG EQLTYDYQFV QFGADQDCYC GAVCCRKKLG AKPCKTKNTT LEEAVKPVAC KVTWKTPKGK TRGRRIAGQA WNNHSQRKIC
301: CRDCIGAVIW LARPMNQKCF GIITQYDEF
101: TNKPFQQRHI KKMKLVQTEK CGYGIVADED INSGEFIIEY VGEVIDDKIC EERLWKLNHK VETNFYLCQI NWNMVIDATH KGNKSRYINH SCSPNTEMQK
201: WIIDGETRIG IFATRFINKG EQLTYDYQFV QFGADQDCYC GAVCCRKKLG AKPCKTKNTT LEEAVKPVAC KVTWKTPKGK TRGRRIAGQA WNNHSQRKIC
301: CRDCIGAVIW LARPMNQKCF GIITQYDEF
Arabidopsis Description
ASHH4histone-lysine N-methyltransferase ASHH4 [Source:TAIR;Acc:AT3G59960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.