CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX75032
CDX76587
CDX84179
CDX84180
CDX91573
CDX99960
CDY00460
CDY16330
CDY27567
CDY31712
CDY33160
CDY35632
CDY42943
CDY43476
CDY53612
CDY71414

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02020.1	CDX75032	AT2G35670.1	15456723
AT4G02020.1	CDX84179	AT2G35670.1	15456723
AT4G02020.1	CDX84180	AT2G35670.1	15456723
AT4G02020.1	CDY31712	AT2G35670.1	15456723
AT4G02020.1	CDY33160	AT2G35670.1	15456723
AT4G02020.1	CDX75032	AT2G35670.1	16924116
AT4G02020.1	CDX84179	AT2G35670.1	16924116
AT4G02020.1	CDX84180	AT2G35670.1	16924116
AT4G02020.1	CDY31712	AT2G35670.1	16924116
AT4G02020.1	CDY33160	AT2G35670.1	16924116
AT4G02020.1	CDY27567	AT3G20740.1	15456723
AT4G02020.1	CDY53612	AT3G20740.1	15456723
AT4G02020.1	CDX76587	AT4G16845.1	15456723
AT4G02020.1	CDY35632	AT4G16845.1	15456723
AT4G02020.1	CDY42943	AT4G16845.1	15456723
AT4G02020.1	CDY43476	AT4G16845.1	15456723
AT4G02020.1	CDY71414	AT4G16845.1	15456723
AT4G02020.1	CDX91573	AT5G51230.1	15456723
AT4G02020.1	CDX99960	AT5G51230.1	15456723
AT4G02020.1	CDY00460	AT5G51230.1	15456723
AT4G02020.1	CDY16330	AT5G51230.1	15456723

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036300.1-P	Field mustard	nucleus	85.05	93.33
CDY22021	Canola	nucleus	92.29	92.72
CDY17381	Canola	nucleus	89.72	91.32
AT4G02020.1	Thale cress	nucleus	82.71	82.71
VIT_07s0005g01490.t01	Wine grape	nucleus	57.59	56.99
PGSC0003DMT400023342	Potato	nucleus	54.21	55.97
Solyc01g079390.2.1	Tomato	nucleus	53.86	55.61
CDY15252	Canola	nucleus	26.05	50.34
GSMUA_Achr1P24850_001	Banana	nucleus	49.77	48.35
Os03t0307800-01	Rice	nucleus	48.95	46.82
KXG40039	Sorghum	nucleus	48.72	46.38
TraesCS4D01G184600.3	Wheat	nucleus, plastid	47.66	45.84
TraesCS4B01G181400.3	Wheat	nucleus, plastid	47.55	45.73
HORVU4Hr1G053740.8	Barley	cytosol, mitochondrion, nucleus	47.78	44.85
CDX89960	Canola	nucleus	31.43	42.16
TraesCS4A01G121300.4	Wheat	mitochondrion	47.31	41.84
CDY38942	Canola	nucleus, plastid	44.04	41.57
CDX89569	Canola	nucleus, plastid	43.81	41.21
CDY37467	Canola	nucleus	31.43	40.51
Zm00001d047636_P002	Maize	nucleus	41.94	40.43
CDY32472	Canola	nucleus	30.14	40.12
Zm00001d028890_P002	Maize	nucleus	44.86	34.56
CDX67669	Canola	cytosol, nucleus, plastid	5.84	19.46
CDX98400	Canola	nucleus	7.13	19.0
CDX67818	Canola	nucleus	6.89	18.38
CDY41194	Canola	nucleus	7.13	17.58
CDX83438	Canola	cytosol	7.36	17.07
CDX79778	Canola	cytosol	7.24	16.99
CDX95590	Canola	nucleus	7.13	16.71
CDX71856	Canola	nucleus	7.01	16.67
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.13	16.18
CDY36467	Canola	nucleus	9.23	15.96
CDY23260	Canola	nucleus	8.64	14.98
CDX87571	Canola	nucleus	7.71	14.32
CDX88310	Canola	nucleus	7.59	14.1
CDX95185	Canola	endoplasmic reticulum, nucleus	6.66	11.66
CDY29869	Canola	mitochondrion	12.27	10.97
CDX92851	Canola	mitochondrion	10.98	10.26
CDX67860	Canola	nucleus	11.45	10.17
CDY14381	Canola	nucleus	11.57	10.16
CDY35655	Canola	nucleus	11.57	10.16
CDY25072	Canola	nucleus	11.33	9.93
CDY06182	Canola	nucleus	11.8	9.51
CDY15398	Canola	nucleus	11.33	9.38
CDY19078	Canola	nucleus	11.21	9.32
CDY10007	Canola	nucleus	11.21	8.63
CDY52297	Canola	nucleus	10.05	6.68
CDX88357	Canola	nucleus	11.68	6.04
CDX87527	Canola	nucleus	11.68	6.04
CDX95184	Canola	cytosol	5.26	3.99

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.1.1.4	MapMan:12.3.3.3	Gene3D:2.170.270.10	GO:A0A078F1X9	EnsemblPlants:CDY07102
ProteinID:CDY07102	ProteinID:CDY07102.1	InterPro:CXC_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0031519
EnsemblPlantsGene:GSBRNA2T00123442001	InterPro:Hist-Lys_N-MeTrfase_EZ	InterPro:IPR001214	InterPro:IPR025778	InterPro:IPR026489	PFAM:PF00856
PFscan:PS50280	PFscan:PS51576	PFscan:PS51633	PANTHER:PTHR22884	PANTHER:PTHR22884:SF237	InterPro:SET_dom
SMART:SM00317	SMART:SM01114	SUPFAM:SSF82199	InterPro:Tesmin/TSO1-like_CXC	UniParc:UPI0004EDEBE8	SEG:seg

Description

BnaCnng01170D

Coordinates

chrLK031975:-:135437..140886

Molecular Weight (calculated)

95727.7 Da

IEP (calculated)

5.977

GRAVY (calculated)

-0.797

Length

856 amino acids

Sequence
(BLAST)

001: MVTETDDSDS SGRIRIEDVV DDDIDDDAGE SLVEGLDEKL NHLKRKIQGE RVRSIQERFE VNKKKVDVHV TTPFSSNGGD DSDVFCTRMG KPLCKLTGFP
101: HGVAERDYVP TKDVLSGSVR LPSAERIPPY TTWIFLDRHE FHSDVLNQNQ RMVEDQSVVG RRQIYYDQHG GETLICSDSE EEPEPEEEKR EYSEGEDCII
201: WLIGQEYGMG EEVQDALSQF LILDASEILE RYNELKLKNQ QNVEAFSDSG FKLGISLDKG LSAALDSFDN LFCRRCLVFD CRLHGCSQPL ISASEKQPYW
301: SDYEGDRNPC SKHCYLQAVR EVPGGSSSFA SKTEEKASEE GCSKADSFDN PHDPAGGVNL PVEKTNTGSN NLDSSSGIEQ DNKTREKREA TRLEDSSDLP
401: NLSNKKQKTA VLDTKMPLVN TISRLEGDQG GKSETSEVNR DSGASLKELA EYIPDKTVHD GGSSSFKPEH GSGKGTMVIA EMSETSQPST EWKPIEKDLY
501: LKGVEMFGRN SCLIARNLLS GLKTCLDVSS YMRENEVSVI RRSSTPNLLL DEGRTDPGNE DDEVPPRTRL FRRKGKARKL KYSTKSAGHP SVWKRIAGGK
601: NQSCKQYTPC GCLSMCGKDC PCLTNETCCE KYCGCSKSCK NRFRGCHCAK SQCRSRQCPC FAAGRECDPD VCRNCWVSCG DGSLGEAPRR GEGQCGNMRL
701: LLRQQQRILL GKSDVAGWGA FLKNSVSKNE YLGEYTGELI SHREADKRGK IYDRANSSFL FDLNDQFVLD AQRKGDKLKF ANHSAKPNCY AKVMFVAGDH
801: RVGIFANERI EASEELFYDY RYGPDQAPAW ARKPEGSSKK DDSSITHRRP RKHQSH

Best Arabidopsis Sequence Match ( AT4G02020.1 )
(BLAST)

001: MVTDDSNSSG RIKSHVDDDD DGEEEEDRLE GLENRLSELK RKIQGERVRS IKEKFEANRK KVDAHVSPFS SAASSRATAE DNGNSNMLSS RMRMPLCKLN
101: GFSHGVGDRD YVPTKDVISA SVKLPIAERI PPYTTWIFLD RNQRMAEDQS VVGRRQIYYE QHGGETLICS DSEEEPEPEE EKREFSEGED SIIWLIGQEY
201: GMGEEVQDAL CQLLSVDASD ILERYNELKL KDKQNTEEFS NSGFKLGISL EKGLGAALDS FDNLFCRRCL VFDCRLHGCS QPLISASEKQ PYWSDYEGDR
301: KPCSKHCYLQ LKAVREVPET CSNFASKAEE KASEEECSKA VSSDVPHAAA SGVSLQVEKT DIGIKNVDSS SGVEQEHGIR GKREVPILKD SNDLPNLSNK
401: KQKTAASDTK MSFVNSVPSL DQALDSTKGD QGGTTDNKVN RDSEADAKEV GEPIPDNSVH DGGSSICQPH HGSGNGAIII AEMSETSRPS TEWNPIEKDL
501: YLKGVEIFGR NSCLIARNLL SGLKTCLDVS NYMRENEVSV FRRSSTPNLL LDDGRTDPGN DNDEVPPRTR LFRRKGKTRK LKYSTKSAGH PSVWKRIAGG
601: KNQSCKQYTP CGCLSMCGKD CPCLTNETCC EKYCGCSKSC KNRFRGCHCA KSQCRSRQCP CFAAGRECDP DVCRNCWVSC GDGSLGEAPR RGEGQCGNMR
701: LLLRQQQRIL LGKSDVAGWG AFLKNSVSKN EYLGEYTGEL ISHHEADKRG KIYDRANSSF LFDLNDQYVL DAQRKGDKLK FANHSAKPNC YAKVMFVAGD
801: HRVGIFANER IEASEELFYD YRYGPDQAPV WARKPEGSKK DDSAITHRRA RKHQSH

Arabidopsis Description

EZA1Histone-lysine N-methyltransferase EZA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.