Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004809.1-P | Field mustard | nucleus | 81.54 | 80.0 |
| CDX79778 | Canola | cytosol | 79.89 | 79.45 |
| CDY17880 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 81.82 | 78.78 |
| Bra000343.1-P | Field mustard | cytosol | 72.18 | 72.38 |
| CDX95590 | Canola | nucleus | 72.45 | 72.05 |
| CDX83438 | Canola | cytosol | 72.18 | 71.0 |
| AT3G59960.1 | Thale cress | nucleus | 59.23 | 65.35 |
| PGSC0003DMT400010951 | Potato | cytosol | 40.22 | 63.48 |
| GSMUA_Achr2P12180_001 | Banana | nucleus | 61.16 | 59.52 |
| VIT_16s0039g00740.t01 | Wine grape | mitochondrion | 68.32 | 54.63 |
| Solyc12g100290.1.1 | Tomato | nucleus | 64.19 | 53.69 |
| TraesCS7A01G453700.1 | Wheat | nucleus | 49.86 | 53.55 |
| TraesCS7D01G443000.1 | Wheat | nucleus | 49.59 | 53.25 |
| TraesCS7B01G354300.1 | Wheat | nucleus | 49.86 | 53.24 |
| Os09t0307800-01 | Rice | cytosol | 49.59 | 52.94 |
| TraesCS5D01G184500.1 | Wheat | nucleus | 50.96 | 52.11 |
| KRH75137 | Soybean | cytosol | 17.91 | 51.18 |
| TraesCS5A01G179900.1 | Wheat | nucleus | 50.41 | 50.55 |
| TraesCS5B01G177800.2 | Wheat | nucleus | 50.41 | 50.55 |
| Solyc01g006220.2.1 | Tomato | endoplasmic reticulum | 61.16 | 49.22 |
| Zm00001d005563_P006 | Maize | nucleus | 45.18 | 48.38 |
| HORVU5Hr1G054880.2 | Barley | mitochondrion | 50.14 | 47.52 |
| Zm00001d020038_P001 | Maize | nucleus | 44.63 | 45.51 |
| HORVU7Hr1G103420.7 | Barley | nucleus | 49.86 | 43.83 |
| OQU89246 | Sorghum | nucleus | 44.9 | 43.7 |
| AT4G30860.1 | Thale cress | nucleus | 33.06 | 24.14 |
| AT1G76710.3 | Thale cress | nucleus | 26.72 | 18.69 |
| AT1G02580.1 | Thale cress | nucleus | 14.6 | 7.69 |
| AT2G23380.1 | Thale cress | nucleus | 17.91 | 7.21 |
| AT4G02020.1 | Thale cress | nucleus | 16.25 | 6.89 |
| AT2G31650.1 | Thale cress | nucleus | 18.18 | 6.21 |
| AT1G05830.3 | Thale cress | nucleus | 18.18 | 6.09 |
| AT4G27910.1 | Thale cress | nucleus | 16.8 | 5.94 |
| AT3G61740.1 | Thale cress | nucleus | 16.25 | 5.8 |
| AT5G53430.1 | Thale cress | nucleus | 16.53 | 5.75 |
| AT1G77300.1 | Thale cress | nucleus | 28.37 | 5.71 |
| AT5G42400.2 | Thale cress | nucleus | 18.46 | 4.83 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.4 | Gene3D:2.170.270.10 | EntrezGene:819021 | UniProt:A0A178VNH9 | ProteinID:AAC23419.2 |
| ProteinID:AEC10383.1 | EMBL:AF408060 | Symbol:ASHH3 | ArrayExpress:AT2G44150 | EnsemblPlantsGene:AT2G44150 | RefSeq:AT2G44150 |
| TAIR:AT2G44150 | RefSeq:AT2G44150-TAIR-G | EnsemblPlants:AT2G44150.1 | TAIR:AT2G44150.1 | InterPro:AWS_dom | EMBL:AY045886 |
| EMBL:AY091447 | Unigene:At.25522 | GO:GO:0000775 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006325 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016279 | GO:GO:0016569 |
| GO:GO:0016740 | GO:GO:0018022 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 |
| InterPro:Hist-Lys_N-MeTrfase_SET2_plant | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR006560 | InterPro:IPR025787 | RefSeq:NP_566010.1 |
| ProteinID:OAP07354.1 | PFAM:PF00856 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50280 | PFscan:PS50868 | PFscan:PS51215 |
| PFscan:PS51578 | PANTHER:PTHR22884 | InterPro:Post-SET_dom | UniProt:Q945S8 | InterPro:SET_dom | SMART:SM00317 |
| SMART:SM00508 | SMART:SM00570 | SUPFAM:SSF82199 | UniParc:UPI00000A73CB | SEG:seg | : |
Description
ASHH3SDG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VNH9]
Coordinates
chr2:+:18258569..18261542
Molecular Weight (calculated)
41288.2 Da
IEP (calculated)
7.949
GRAVY (calculated)
-0.572
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MPASKKISDR NHLGQVFDKL LNQIGESEEF ELPEWLNKGK PTPYIFIRRN IYLTKKVKRR VEDDGIFCSC SSSSPGSSST VCGSNCHCGM LFSSCSSSCK
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.