Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80967 | Canola | mitochondrion | 23.11 | 30.39 |
| Bra005861.1-P | Field mustard | mitochondrion | 21.85 | 28.57 |
| CDY11330 | Canola | mitochondrion | 21.85 | 28.26 |
| GSMUA_Achr10P... | Banana | cytosol | 21.43 | 28.18 |
| Os11t0244800-01 | Rice | nucleus | 29.41 | 27.56 |
| Os03t0818300-01 | Rice | nucleus | 28.57 | 27.53 |
| GSMUA_Achr10P... | Banana | cytosol | 17.23 | 27.33 |
| Os05t0419100-01 | Rice | nucleus | 29.41 | 27.13 |
| Os07t0233300-01 | Rice | nucleus | 26.47 | 25.82 |
| Os02t0564100-01 | Rice | nucleus | 28.57 | 25.47 |
| Os04t0444900-01 | Rice | nucleus | 27.31 | 25.39 |
| Os01t0887700-01 | Rice | nucleus | 28.99 | 25.37 |
| Os07t0608400-01 | Rice | nucleus | 26.47 | 22.66 |
| GSMUA_Achr10P... | Banana | cytosol | 17.65 | 21.99 |
| GSMUA_Achr10P... | Banana | cytosol | 16.81 | 20.73 |
| Os05t0163100-01 | Rice | nucleus | 17.23 | 15.41 |
Protein Annotations
| EnsemblPlants:Os01t0158800-00 | EnsemblPlantsGene:Os01g0158800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 |
| InterPro:Alfin | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF37 | PFAM:PF12165 | ProteinID:BAS70506.1 | SEG:seg |
| UniParc:UPI0003938C4B | UniProt:A0A0P0UZ01 | MapMan:15.5.8 | : | : | : |
Description
Similar to PHD finger protein. (Os01t0158800-00)
Coordinates
chr1:-:3079533..3084696
Molecular Weight (calculated)
25867.7 Da
IEP (calculated)
6.103
GRAVY (calculated)
-0.255
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYPSTISVT FSLLPRPSIS HFANGHFNLQ PPRRHPTASP ARRWPERSLA SQRPPPPPPP PPWTPLPAAA PASPRCAPSR TSSATSAPAA PPSSAPSPKV
101: CDLFSRLAGA DLDCLCLYGN SDGTWEVAPP PEMVPPELPE PALGINFSRD TMYRSDWVAL LSVFSDSWLL AVAFFHGARL DRDDRVRLFN MINDLPTVYE
201: VVFGVEQSDE QSGMDNGAKD TPSPQVKLNV YITVLPLC
101: CDLFSRLAGA DLDCLCLYGN SDGTWEVAPP PEMVPPELPE PALGINFSRD TMYRSDWVAL LSVFSDSWLL AVAFFHGARL DRDDRVRLFN MINDLPTVYE
201: VVFGVEQSDE QSGMDNGAKD TPSPQVKLNV YITVLPLC
001: MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
Arabidopsis Description
AL1AL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.