Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020107.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY51845 | Canola | cytosol | 24.41 | 88.57 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 87.8 | 86.77 |
| CDY16540 | Canola | cytosol | 88.19 | 85.5 |
| AT5G20510.1 | Thale cress | cytosol | 86.22 | 84.23 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 79.53 | 80.16 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 77.95 | 77.95 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 77.56 | 77.56 |
| CDY17594 | Canola | cytosol | 35.83 | 77.12 |
| KRH71913 | Soybean | cytosol | 28.35 | 75.79 |
| GSMUA_Achr8P30680_001 | Banana | nucleus | 72.83 | 73.71 |
| CDY52629 | Canola | nucleus | 75.59 | 73.56 |
| CDX88221 | Canola | nucleus | 75.2 | 73.18 |
| CDY19781 | Canola | cytosol | 74.02 | 73.15 |
| CDX87061 | Canola | cytosol | 74.02 | 73.15 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 70.08 | 71.2 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 68.9 | 68.9 |
| CDX84026 | Canola | nucleus | 66.14 | 67.2 |
| CDX96851 | Canola | cytosol | 65.35 | 66.4 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 63.78 | 66.39 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 63.78 | 66.39 |
| TraesCS2D01G179400.2 | Wheat | nucleus | 71.26 | 66.3 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 71.26 | 66.3 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 71.26 | 66.3 |
| Os07t0608400-01 | Rice | nucleus | 72.44 | 66.19 |
| EER97523 | Sorghum | nucleus | 69.29 | 65.43 |
| CDY03049 | Canola | cytosol | 62.99 | 65.31 |
| CDY53545 | Canola | cytosol | 61.81 | 64.61 |
| CDX81645 | Canola | cytosol | 61.02 | 63.79 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 25.2 | 63.37 |
| CDY00726 | Canola | nucleus | 59.84 | 62.04 |
| CDX73886 | Canola | nucleus | 59.84 | 62.04 |
| CDY36305 | Canola | cytosol | 61.02 | 62.0 |
| CDY08544 | Canola | nucleus | 60.24 | 61.94 |
| CDY01002 | Canola | nucleus | 60.63 | 61.6 |
| CDY65375 | Canola | nucleus | 57.87 | 60.25 |
| CDX70142 | Canola | cytosol | 56.3 | 59.58 |
| HORVU2Hr1G031990.2 | Barley | nucleus | 70.87 | 59.41 |
| CDY17593 | Canola | cytosol | 27.56 | 59.32 |
| CDY45267 | Canola | nucleus | 47.64 | 59.31 |
| CDX98851 | Canola | nucleus | 55.51 | 58.75 |
| Zm00001d022110_P002 | Maize | nucleus | 69.29 | 55.87 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 55.12 | 48.61 |
| CDX80967 | Canola | mitochondrion | 25.59 | 35.91 |
| CDY11330 | Canola | mitochondrion | 25.59 | 35.33 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 29.13 | 33.79 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 29.13 | 33.79 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078JYY1 | UniProt:A0A078JYY1 | InterPro:Alfin | EnsemblPlants:CDY70751 |
| ProteinID:CDY70751 | ProteinID:CDY70751.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00007287001 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 |
| ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 | SMART:SM00249 | SUPFAM:SSF57903 |
| UniParc:UPI0002543366 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng34840DBnaAnng34840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYY1]
Coordinates
chrLK043181:+:1162..2936
Molecular Weight (calculated)
28921.7 Da
IEP (calculated)
4.726
GRAVY (calculated)
-0.725
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGGARYN PRTVEEVFRD FKGRRAGILR ALTTDVKEFF QQCNPEKDNL CLYGFPNEVW EVNLPAEEVP PELPEPALGI NFARDGMQEK EWISLVAVHS
101: DAWLLSVSFY FGSRFGFDKA DRKRLFNMIN EVPTVFEVVT GSAKKQTEEQ PSSVNRNGNR SKSNSKVRDL EVKSSRTIEV NDEEEGVEEE EEDEEEHGET
201: LCGACGDNYA SDFWICCDMC EKWFHGKCVK ITPARAEHIK QYKCPSCSNK RARP
101: DAWLLSVSFY FGSRFGFDKA DRKRLFNMIN EVPTVFEVVT GSAKKQTEEQ PSSVNRNGNR SKSNSKVRDL EVKSSRTIEV NDEEEGVEEE EEDEEEHGET
201: LCGACGDNYA SDFWICCDMC EKWFHGKCVK ITPARAEHIK QYKCPSCSNK RARP
001: MEGGTAHYSP RTVEEVFRDF KGRRAGIIQA LTTDVEDFFQ QCDPEKQNLC LYGFPNEVWE VNLPAEEVPP ELPEPALGIN FARDGMQERN WLSLVAVHSD
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMRGLE SKSSKTIHAK DEEEGLELEE GEEEEDEDED
201: EHGETLCGAC GDNYASDEFW ICCDMCEKWF HGECVKITPA RAEHIKHYKC PTCSNKRARP
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMRGLE SKSSKTIHAK DEEEGLELEE GEEEEDEDED
201: EHGETLCGAC GDNYASDEFW ICCDMCEKWF HGECVKITPA RAEHIKHYKC PTCSNKRARP
Arabidopsis Description
AL5PHD finger protein ALFIN-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.