Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016081_P002 | Maize | nucleus | 71.02 | 70.19 |
| KXG29961 | Sorghum | nucleus | 71.62 | 69.79 |
| Zm00001d053382_P002 | Maize | nucleus | 68.05 | 69.45 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 70.31 | 69.4 |
| TraesCS7D01G343700.1 | Wheat | cytosol | 69.95 | 69.38 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 68.88 | 68.97 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 67.22 | 66.28 |
| Os06t0524300-01 | Rice | nucleus | 54.51 | 56.6 |
| Bra037384.1-P | Field mustard | nucleus | 12.23 | 44.98 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 38.95 | 43.27 |
| GSMUA_Achr10P... | Banana | nucleus | 39.31 | 42.22 |
| GSMUA_Achr10P... | Banana | cytosol | 38.84 | 42.14 |
| CDX79176 | Canola | cytosol | 5.58 | 41.59 |
| KRG99688 | Soybean | cytosol | 3.33 | 41.18 |
| GSMUA_Achr10P... | Banana | nucleus | 35.99 | 40.35 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 34.68 | 34.39 |
| CDY42041 | Canola | cytosol | 24.82 | 32.35 |
| CDX71720 | Canola | cytosol | 28.27 | 32.16 |
| CDY11374 | Canola | cytosol | 27.91 | 31.71 |
| Bra007625.1-P | Field mustard | cytosol | 27.79 | 31.58 |
| CDX80013 | Canola | nucleus | 24.82 | 31.43 |
| Bra004541.1-P | Field mustard | nucleus | 24.82 | 31.15 |
| Bra033264.1-P | Field mustard | nucleus | 21.02 | 30.46 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 28.03 | 30.22 |
| KRG97141 | Soybean | nucleus | 32.66 | 30.19 |
| CDY15177 | Canola | nucleus | 19.95 | 30.16 |
| CDY11373 | Canola | cytosol | 26.25 | 30.15 |
| KRH68892 | Soybean | nucleus | 32.3 | 30.09 |
| AT2G46380.1 | Thale cress | nucleus | 27.43 | 30.08 |
| AT3G61670.1 | Thale cress | nucleus | 27.91 | 29.75 |
| CDX90032 | Canola | nucleus | 19.36 | 29.11 |
| CDY48504 | Canola | nucleus | 19.12 | 28.6 |
| KRH06502 | Soybean | nucleus | 30.29 | 28.59 |
| CDX91876 | Canola | nucleus | 19.6 | 28.25 |
| KRH47938 | Soybean | nucleus | 29.81 | 28.08 |
| CDY67475 | Canola | nucleus | 18.76 | 26.73 |
| Bra000943.1-P | Field mustard | nucleus | 18.76 | 26.33 |
| Solyc08g082040.2.1 | Tomato | nucleus | 29.45 | 26.24 |
| CDY07174 | Canola | nucleus | 19.71 | 26.1 |
| AT1G01440.1 | Thale cress | nucleus | 20.55 | 26.05 |
| PGSC0003DMT400032053 | Potato | nucleus | 29.22 | 26.0 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.74 | 25.03 |
| PGSC0003DMT400000290 | Potato | nucleus | 29.69 | 24.9 |
| Os01t0621300-01 | Rice | nucleus | 23.63 | 24.66 |
| AT4G01090.1 | Thale cress | nucleus | 20.19 | 23.81 |
| Os05t0586400-01 | Rice | nucleus | 21.62 | 23.33 |
Protein Annotations
| EnsemblPlants:Os02t0258300-01 | EnsemblPlantsGene:Os02g0258300 | EntrezGene:4328928 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 |
| PANTHER:PTHR31105:SF7 | PFAM:PF11331 | ProteinID:BAD20057.1 | ProteinID:BAF08389.1 | ProteinID:BAS77969.1 | ProteinID:EEE56684.1 |
| RefSeq:XP_015623905.1 | SEG:seg | UniParc:UPI0000375A30 | UniProt:Q6K2T0 | MapMan:35.2 | : |
Description
Zinc finger, FYVE/PHD-type domain containing protein. (Os02t0258300-01);Similar to extra-large G-protein-related. (Os02t0258300-02)
Coordinates
chr2:-:8938210..8943482
Molecular Weight (calculated)
93058.0 Da
IEP (calculated)
7.513
GRAVY (calculated)
-0.775
Length
842 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALGDMEGE EGQRRQQQIR VVRCPKCEKF LPELPNYSVY VCGGCGATLQ AKKNSASENS SEKSDGGHVK YLEVLESSPD NKGAASKDTC EAAQEGEAKN
101: GEAKAEERQV LLDRMAACDD SRIPREPNAL KLEASLRDDS REIREAKYRR IRSEDKGEAK HTVRARDRSP RSVVDAIPPN AYPAEGPSDY HIKSRFRHTN
201: GEQADMRNLE GLNRVNGLEK DRADLLRMLD ELRDQVQRSC EITNKPSGST STDKAVDASG LYNPRERLSR LRHGSPQLQR SGSQQSPSLN GQAPCIPQAY
301: APGTAQQDLH GYGEPMAHMG APSYPVGTYP WRNFDNYFYG QYDPDPLISY HHDGFYHQPA CSCLHCYHRE FLPVQGPPLG FNHRRVPPYV MNNPRVYPVD
401: GPAMFGTQNY NSRVNASMQR NHMRAAMSKK PAQTCEPIAC GAPFTICYNC YEVLQLPKKS PVPGKDEYKL RCGSCSHALV VKLDGSRLDV SAPSPISHIS
501: GGSKISSNDG QGSNANSAPH ERVLPLYSFS AASHGSQDLP SNSSEAEKMQ GISSSCSISE DENSPARSNS QRDTPGSRDL HPEAEVSTRV PSLHLRDHFG
601: YSPSEKVVDG SGKGSRSTRS EHEKAVLTES FKQNTVKDVS VVNIMDLSDD EYDDPDYMQD RGDVAQPVDH PRAVKTGDSF FTNLIKKSFK INNGMGNGRA
701: KVFINGYPIS DRAVRKAEKI AGPIYPGEYW YDYRAGFWGV MGQSCLGMIP PYIPELNYPM PKKCAAGNTG VFVNGRELHQ KDLDLLVGRG LPDSPGRSYR
801: VEMSGKVSDE VSGEELYCLG KLAPTVEKMK RGFGMRVPRI IP
101: GEAKAEERQV LLDRMAACDD SRIPREPNAL KLEASLRDDS REIREAKYRR IRSEDKGEAK HTVRARDRSP RSVVDAIPPN AYPAEGPSDY HIKSRFRHTN
201: GEQADMRNLE GLNRVNGLEK DRADLLRMLD ELRDQVQRSC EITNKPSGST STDKAVDASG LYNPRERLSR LRHGSPQLQR SGSQQSPSLN GQAPCIPQAY
301: APGTAQQDLH GYGEPMAHMG APSYPVGTYP WRNFDNYFYG QYDPDPLISY HHDGFYHQPA CSCLHCYHRE FLPVQGPPLG FNHRRVPPYV MNNPRVYPVD
401: GPAMFGTQNY NSRVNASMQR NHMRAAMSKK PAQTCEPIAC GAPFTICYNC YEVLQLPKKS PVPGKDEYKL RCGSCSHALV VKLDGSRLDV SAPSPISHIS
501: GGSKISSNDG QGSNANSAPH ERVLPLYSFS AASHGSQDLP SNSSEAEKMQ GISSSCSISE DENSPARSNS QRDTPGSRDL HPEAEVSTRV PSLHLRDHFG
601: YSPSEKVVDG SGKGSRSTRS EHEKAVLTES FKQNTVKDVS VVNIMDLSDD EYDDPDYMQD RGDVAQPVDH PRAVKTGDSF FTNLIKKSFK INNGMGNGRA
701: KVFINGYPIS DRAVRKAEKI AGPIYPGEYW YDYRAGFWGV MGQSCLGMIP PYIPELNYPM PKKCAAGNTG VFVNGRELHQ KDLDLLVGRG LPDSPGRSYR
801: VEMSGKVSDE VSGEELYCLG KLAPTVEKMK RGFGMRVPRI IP
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.