Factsheet for Os01t0201000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0316600-01
Os01t0621300-01
Os01t0919900-01
Os02t0133000-00
Os02t0258300-01
Os02t0438200-01
Os02t0504800-01
Os03t0344100-02
Os04t0379900-01
Os05t0364600-01
Os05t0586400-01
Os06t0524300-01
Os07t0673500-01
Os08t0428400-01
Os09t0132600-01
Os09t0509000-01
Os11t0586300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10270.1	Os02t0133000-00	AT1G27630.1	12678503
AT5G10270.1	Os02t0438200-01	AT1G27630.1	12678503
AT5G10270.1	Os09t0132600-01	AT3G15000.1	12678503
AT5G10270.1	Os09t0509000-01	AT3G15000.1	12678503
AT5G10270.1	Os08t0428400-01	AT3G17860.1	21798944
AT5G64960.1	Os01t0316600-01	AT1G02840.1	18208522
AT5G64960.1	Os03t0344100-02	AT1G02840.1	18208522
AT5G64960.1	Os05t0364600-01	AT1G02840.1	18208522
AT5G64960.1	Os07t0673500-01	AT1G02840.1	18208522
AT5G64960.1	Os02t0133000-00	AT1G27630.1	12678503
AT5G64960.1	Os02t0438200-01	AT1G27630.1	12678503
AT5G64960.1	Os01t0919900-01	AT2G43710.1	20706207
AT5G64960.1	Os02t0504800-01	AT2G43710.1	20706207
AT5G64960.1	Os04t0379900-01	AT2G43710.1	20706207
AT5G64960.1	Os09t0132600-01	AT3G15000.1	12678503
AT5G64960.1	Os09t0509000-01	AT3G15000.1	12678503
AT5G64960.1	Os11t0586300-01	AT3G55760.1	20706207
AT5G64960.1	Os01t0621300-01	AT4G01090.1	21798944
AT5G64960.1	Os02t0258300-01	AT4G01090.1	21798944
AT5G64960.1	Os05t0586400-01	AT4G01090.1	21798944
AT5G64960.1	Os06t0524300-01	AT4G01090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0112500-01	Rice	nucleus	21.88	3.74
Os02t0559300-02	Rice	plasma membrane	21.09	3.7
CDY18101	Canola	cytosol	9.38	2.6
CDY56227	Canola	nucleus	10.16	2.55
Os01t0958000-01	Rice	plasma membrane	10.16	2.53
Os01t0925700-01	Rice	cytosol	7.03	2.43
AT5G10270.1	Thale cress	nucleus	9.38	2.38
Bra028333.1-P	Field mustard	nucleus	9.38	2.36
CDX96988	Canola	nucleus	9.38	2.36
AT5G64960.1	Thale cress	nucleus	9.38	2.34
Bra009045.1-P	Field mustard	nucleus	8.59	2.16
CDX69849	Canola	nucleus	8.59	2.16
Solyc04g056280.2.1	Tomato	nucleus	8.59	2.15
CDY33994	Canola	nucleus	8.59	2.13
CDY31293	Canola	nucleus	8.59	2.12
Bra031892.1-P	Field mustard	nucleus	8.59	2.12
Os07t0596600-02	Rice	plasma membrane	11.72	2.12
Os01t0367700-01	Rice	plasma membrane	8.59	1.97
Os05t0389700-01	Rice	nucleus	7.81	1.93
CDY14526	Canola	cytosol	9.38	1.67
Os12t0577700-00	Rice	plasma membrane	4.69	0.81
CDY08835	Canola	cytosol	1.56	0.47
CDY72385	Canola	cytosol	0.0	0.0
Os02t0304500-00	Rice	plastid	0.0	0.0
Os07t0668000-00	Rice	cytosol, plasma membrane	0.0	0.0
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	0.0	0.0
Os11t0242500-01	Rice	mitochondrion	0.0	0.0
Bra024341.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Os01t0201000-01	EnsemblPlantsGene:Os01g0201000	ProteinID:BAS70906.1	SEG:seg	UniParc:UPI0003939753	UniProt:A0A0P0UZC0
MapMan:35.2	:	:	:	:	:

Description

CDK-LIKE 4, cyclin-dependent kinase-like 4Similar to protein kinase family protein. (Os01t0201000-01)

Coordinates

chr1:+:5498215..5499226

Molecular Weight (calculated)

14426.7 Da

IEP (calculated)

10.443

GRAVY (calculated)

-1.116

Length

128 amino acids

Sequence
(BLAST)

001: AEAFPHERRL SESINERFSS SGKYDQVFQQ KDDRSSRVDG AIGYGSKGNK IHHSGPLICP SGNVDQMLKE NDRQIQEVFR RTRVEKSRAR RGHGHSGDGH
101: HQFGLRPSDF GAAPVFPSSR SSYRAMQQ

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.