Factsheet for Os02t0504800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0034g00180.t01	Wine grape	cytosol	22.36	67.92
VIT_05s0094g00750.t01	Wine grape	plastid	62.73	62.54
GSMUA_Achr7P22860_001	Banana	plastid	61.49	54.85
KXG30261	Sorghum	plastid	69.25	53.61
Os04t0379900-01	Rice	plastid	64.6	53.33
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	26.71	52.44
HORVU5Hr1G039730.1	Barley	plastid	62.42	52.21
VIT_12s0034g00190.t01	Wine grape	extracellular	27.02	52.1
TraesCS5B01G123200.1	Wheat	plastid	61.8	51.69
TraesCS5A01G123600.2	Wheat	plastid	61.8	51.69
TraesCS5D01G131500.1	Wheat	plastid	61.18	51.57
GSMUA_Achr8P08750_001	Banana	plastid	56.52	51.56
VIT_00s0499g00030.t01	Wine grape	plastid	62.73	51.4
Os01t0919900-01	Rice	plastid	63.04	50.75
TraesCS5B01G539600.1	Wheat	plastid	61.49	50.64
KRH71270	Soybean	endoplasmic reticulum, nucleus	61.49	50.64
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	24.84	50.63
TraesCS5D01G548700.1	Wheat	plastid	61.18	50.38
PGSC0003DMT400002555	Potato	plastid	61.49	50.38
Zm00001d050552_P001	Maize	plastid	68.63	50.23
Solyc03g063110.2.1	Tomato	plastid	61.18	50.13
PGSC0003DMT400042118	Potato	plastid	61.8	50.13
Solyc06g053480.2.1	Tomato	plastid	61.49	49.87
KRH50195	Soybean	plastid	61.8	49.5
Solyc11g008680.1.1	Tomato	plastid	60.25	49.36
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	60.87	49.12
PGSC0003DMT400041874	Potato	plastid	59.94	49.11
AT2G43710.1	Thale cress	plastid	60.87	48.88
CDY17916	Canola	plastid	60.56	48.87
CDY44250	Canola	plastid	60.25	48.62
Bra000321.1-P	Field mustard	plastid	59.94	48.49
CDX83464	Canola	plastid	59.94	48.49
TraesCS4A01G326700.1	Wheat	plastid	61.49	48.41
Bra004778.1-P	Field mustard	plastid	60.25	48.38
GSMUA_Achr5P25160_001	Banana	plastid	59.01	48.22
CDX79807	Canola	plastid	59.94	48.13
Os01t0880800-01	Rice	plastid	55.28	46.72
Os08t0200100-01	Rice	plastid	47.2	37.62
Os08t0199400-01	Rice	plastid	47.83	36.75
Os03t0423300-01	Rice	plastid	47.2	36.36
Os03t0741000-00	Rice	plastid	30.75	33.0
Os06t0503800-00	Rice	plastid	23.91	31.56

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A0P0VJG5	ProteinID:BAS78819.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	InterPro:IPR012348	EnsemblPlantsGene:Os02g0504800	EnsemblPlants:Os02t0504800-01	PFAM:PF03405
PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF8	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI0000DF0704
SEG:seg	:	:	:	:	:

Description

Similar to Delta-9 stearoyl-acyl carrier protein desaturase (EC 1.14.99.6) (Fragment). (Os02t0504800-01)

Coordinates

chr2:-:17952030..17957355

Molecular Weight (calculated)

34986.5 Da

IEP (calculated)

7.570

GRAVY (calculated)

-0.458

Length

322 amino acids

Sequence
(BLAST)

001: MSLTGCLPPR PPCSMRRRTS GGGASVSPVV AMASTAGVGG IGNPTPRGKK PFAPWREVPP QVTHTLPPEK KEVFDSLEGW AADTILPYLK PVEESWQPQD
101: HLPDPRSPSF GDEVAALRER AAGLPDDHLV CLVGDMVTEE ALPTYQTMLN TMDGGVRDET GAGGSAWAVW TRAWAAEENR HGDLMNKYLY LTGRVDMRQV
201: EKTIQYLIGS GMDPRTENDP YMGFIYTTFQ ERATSISHGN TARHAGRHGD AALARVCGTV ARWGVPGLAA GLSGEGRRAQ DFVCSLGPRF RRMEERAQEA
301: AKRAPPAAAA PFSWIHGRQV QL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.