CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71270	Soybean	endoplasmic reticulum, nucleus	95.52	98.21
VIT_05s0094g00750.t01	Wine grape	plastid	69.4	86.38
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	34.83	85.37
PGSC0003DMT400042118	Potato	plastid	83.33	84.38
Solyc06g053480.2.1	Tomato	plastid	82.84	83.88
Bra000321.1-P	Field mustard	plastid	81.09	81.91
CDX83464	Canola	plastid	81.09	81.91
CDY44250	Canola	plastid	80.85	81.45
AT2G43710.1	Thale cress	plastid	81.09	81.3
VIT_12s0034g00180.t01	Wine grape	cytosol	21.39	81.13
CDX79807	Canola	plastid	80.85	81.05
CDY17916	Canola	plastid	80.35	80.95
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	31.59	80.38
Bra004778.1-P	Field mustard	plastid	80.1	80.3
GSMUA_Achr7P22860_001	Banana	plastid	70.9	78.95
GSMUA_Achr8P08750_001	Banana	plastid	68.41	77.9
EES04113	Sorghum	plastid	76.87	77.83
Zm00001d012033_P002	Maize	mitochondrion	75.87	77.81
Os01t0919900-01	Rice	plastid	76.37	76.75
Os04t0379900-01	Rice	plastid	73.88	76.15
TraesCS3B01G463000.1	Wheat	plastid	74.13	75.83
TraesCS3D01G421700.1	Wheat	plastid	73.88	75.77
EES10606	Sorghum	plastid	73.63	75.51
Zm00001d042344_P002	Maize	plastid	76.87	75.0
Zm00001d025170_P001	Maize	plastid	73.13	75.0
Zm00001d004019_P001	Maize	plastid	72.89	74.74
TraesCS2A01G280700.2	Wheat	plastid	72.64	74.49
TraesCS2B01G298000.1	Wheat	plastid	72.39	74.23
TraesCS2D01G279500.2	Wheat	golgi, plastid	72.39	74.23
VIT_12s0034g00190.t01	Wine grape	extracellular	29.1	70.06
TraesCS5A01G123600.2	Wheat	plastid	66.92	69.87
KRH15948	Soybean	cytosol, nucleus	58.21	69.44
TraesCS5D01G131500.1	Wheat	plastid	65.92	69.37
HORVU5Hr1G039730.1	Barley	plastid	66.42	69.35
TraesCS5B01G123200.1	Wheat	plastid	66.17	69.09
TraesCS5D01G548700.1	Wheat	plastid	65.17	67.01
GSMUA_Achr5P25160_001	Banana	plastid	65.67	67.01
TraesCS5B01G539600.1	Wheat	plastid	64.18	65.98
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	72.89	65.84
KXG30261	Sorghum	plastid	67.91	65.62
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	64.68	65.16
HORVU3Hr1G094050.3	Barley	plastid	74.63	64.52
TraesCS4A01G326700.1	Wheat	plastid	65.17	64.06
Zm00001d050552_P001	Maize	plastid	68.41	62.5
Os02t0504800-01	Rice	plastid	49.5	61.8
TraesCS3A01G426800.3	Wheat	plastid	73.63	61.41
KRH18113	Soybean	plastid	57.71	61.38
KRH18114	Soybean	cytosol	51.49	55.2

Protein Annotations

Gene3D:1.10.620.20	EntrezGene:100217331	MapMan:5.1.7.1	EMBL:ACUP02004667	UniProt:B8XJY4	InterPro:FADS-2_CS
EMBL:FJ393222	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	EnsemblPlantsGene:GLYMA_07G207200	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114
InterPro:IPR012348	EnsemblPlants:KRH50195	ProteinID:KRH50195	ProteinID:KRH50195.1	EMBL:KX881934	PFAM:PF03405
PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI0001895373	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:37639602..37643509

Molecular Weight (calculated)

46088.2 Da

IEP (calculated)

6.449

GRAVY (calculated)

-0.486

Length

402 amino acids

Sequence
(BLAST)

001: MLPLLHLTHS SMALRLNPIP TQTFSLPQMP SLRSPRFRMA STLRSGSKEV ENIKKPFTPP REVHVQVTHS MPPQKIEIFK SLEDWADQNI LTHLKPVEKC
101: WQPQDFLPDP SSDGFEEQVK ELRERAKEIP DDYFVVLVGD MITEEALPTY QTMLNTLDGV RDETGASLTS WAIWTRAWTA EENRHGDLLN KYLYLSGRVD
201: MKQIEKTIQY LIGSGMDPRT ENSPYLGFIY TSFQERATFI SHGNTARLAK EHGDIKLAQI CGMIASDEKR HETAYTKIVE KLFEVDPDGT VMAFADMMRK
301: KIAMPAHLMY DGRDDNLFDN YSAVAQRIGV YTAKDYADIL EFLVGRWKVE QLTGLSGEGR KAQEYVCGLP PRIRRLEERA QARGKESSTL KFSWIHDREV
401: LL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.