Factsheet for GSMUA_Achr8P00820_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 2
vacuole 1
peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	84.76	87.97
GSMUA_Achr5P25190_001	Banana	mitochondrion	33.54	83.33
VIT_12s0034g00180.t01	Wine grape	cytosol	28.66	44.34
GSMUA_Achr7P22860_001	Banana	plastid	92.68	42.11
GSMUA_Achr8P32640_001	Banana	cytosol	69.51	41.76
GSMUA_Achr8P08750_001	Banana	plastid	89.02	41.36
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.12	39.38
Zm00001d012033_P002	Maize	mitochondrion	89.63	37.5
Os04t0379900-01	Rice	plastid	89.02	37.44
Os01t0919900-01	Rice	plastid	90.85	37.25
CDY44250	Canola	plastid	90.24	37.09
GSMUA_Achr5P25160_001	Banana	plastid	89.02	37.06
EES10606	Sorghum	plastid	88.41	36.99
Bra000321.1-P	Field mustard	plastid	89.63	36.93
CDX83464	Canola	plastid	89.63	36.93
AT2G43710.1	Thale cress	plastid	90.24	36.91
CDY17916	Canola	plastid	89.02	36.59
EES04113	Sorghum	plastid	88.41	36.52
Zm00001d025170_P001	Maize	plastid	86.59	36.22
TraesCS3D01G421700.1	Wheat	plastid	86.59	36.22
Bra004778.1-P	Field mustard	plastid	88.41	36.16
CDX79807	Canola	plastid	88.41	36.16
VIT_00s0499g00030.t01	Wine grape	plastid	86.59	36.13
TraesCS3B01G463000.1	Wheat	plastid	86.59	36.13
Zm00001d004019_P001	Maize	plastid	85.98	35.97
PGSC0003DMT400042118	Potato	plastid	86.59	35.77
Solyc06g053480.2.1	Tomato	plastid	86.59	35.77
TraesCS2D01G279500.2	Wheat	golgi, plastid	85.37	35.71
TraesCS2B01G298000.1	Wheat	plastid	85.37	35.71
TraesCS2A01G280700.2	Wheat	plastid	85.37	35.71
KRH71270	Soybean	endoplasmic reticulum, nucleus	84.76	35.55
Zm00001d042344_P002	Maize	plastid	89.02	35.44
VIT_05s0094g00750.t01	Wine grape	plastid	69.51	35.29
Solyc03g063110.2.1	Tomato	plastid	84.15	35.11
PGSC0003DMT400002555	Potato	plastid	84.15	35.11
KRH50195	Soybean	plastid	85.37	34.83
GSMUA_Achr7P03060_001	Banana	plastid	66.46	34.6
TraesCS5D01G131500.1	Wheat	plastid	79.88	34.29
TraesCS5A01G123600.2	Wheat	plastid	79.88	34.03
TraesCS5B01G123200.1	Wheat	plastid	79.88	34.03
HORVU5Hr1G039730.1	Barley	plastid	79.27	33.77
Solyc11g008680.1.1	Tomato	plastid	80.49	33.59
PGSC0003DMT400041874	Potato	plastid	79.88	33.33
TraesCS5B01G539600.1	Wheat	plastid	75.61	31.71
TraesCS5D01G548700.1	Wheat	plastid	75.61	31.71
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	85.37	31.46
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	75.0	30.83
TraesCS4A01G326700.1	Wheat	plastid	76.22	30.56
HORVU3Hr1G094050.3	Barley	plastid	86.59	30.54
KXG30261	Sorghum	plastid	75.0	29.57
TraesCS3A01G426800.3	Wheat	plastid	86.59	29.46
VIT_12s0034g00190.t01	Wine grape	extracellular	29.27	28.74
Zm00001d050552_P001	Maize	plastid	75.0	27.95
Os02t0504800-01	Rice	plastid	52.44	26.71
GSMUA_Achr5P25180_001	Banana	cytosol	9.15	9.09

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G00820_001	EnsemblPlants:GSMUA_Achr8P00820_001	EnsemblPlants:GSMUA_Achr8T00820_001	InterPro:IPR012348
UniProt:M0TLI4	PFAM:PF03405	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI000294DD1B	:	:	:	:	:

Description

Acyl-[acyl-carrier-protein] desaturase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G00820_001]

Coordinates

chr8:+:698732..700388

Molecular Weight (calculated)

18583.4 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.425

Length

164 amino acids

Sequence
(BLAST)

001: MRQIEKTIQY LIGSGMDPRT ENNPYLGFIY TSFQERATFI SHGNTARLAK EHGDLKLAQI CGIIASDEKR HETAYTKIVE KLFEIDPDGT VLAFADMMKK
101: KISMPAHLMY DGELTGLSGE GNKAQDFVCT LAPRIRRLEE RAQGRAKKAP AIPFSWIYDR EVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.