CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79807	Canola	plastid	97.24	96.76
CDX83464	Canola	plastid	94.99	95.23
CDY44250	Canola	plastid	94.99	94.99
AT2G43710.1	Thale cress	plastid	93.73	93.27
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	36.59	89.02
Solyc06g053480.2.1	Tomato	plastid	83.96	84.38
PGSC0003DMT400042118	Potato	plastid	83.96	84.38
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	33.08	83.54
KRH71270	Soybean	endoplasmic reticulum, nucleus	81.45	83.12
VIT_05s0094g00750.t01	Wine grape	plastid	66.17	81.73
KRH50195	Soybean	plastid	80.95	80.35
Zm00001d012033_P002	Maize	mitochondrion	77.44	78.83
Os01t0919900-01	Rice	plastid	78.2	78.0
EES04113	Sorghum	plastid	77.19	77.58
TraesCS3B01G463000.1	Wheat	plastid	75.94	77.1
TraesCS3D01G421700.1	Wheat	plastid	75.69	77.04
Os04t0379900-01	Rice	plastid	75.19	76.92
CDY34739	Canola	plastid	52.38	76.84
TraesCS2A01G280700.2	Wheat	plastid	75.19	76.53
VIT_12s0034g00180.t01	Wine grape	cytosol	20.3	76.42
EES10606	Sorghum	plastid	74.94	76.28
TraesCS2D01G279500.2	Wheat	golgi, plastid	74.94	76.28
TraesCS2B01G298000.1	Wheat	plastid	74.94	76.28
GSMUA_Achr8P08750_001	Banana	plastid	67.42	76.2
GSMUA_Achr7P22860_001	Banana	plastid	68.92	76.18
Zm00001d025170_P001	Maize	plastid	74.19	75.51
Zm00001d042344_P002	Maize	plastid	77.69	75.24
Zm00001d004019_P001	Maize	plastid	73.68	75.0
CDY26510	Canola	plastid	73.43	73.8
CDX69459	Canola	plastid	73.43	73.8
CDX74242	Canola	plastid	73.18	73.74
CDX92006	Canola	plastid	72.93	73.48
TraesCS5D01G131500.1	Wheat	plastid	66.42	69.37
TraesCS5A01G123600.2	Wheat	plastid	66.92	69.35
HORVU5Hr1G039730.1	Barley	plastid	66.67	69.09
TraesCS5B01G123200.1	Wheat	plastid	66.42	68.83
VIT_12s0034g00190.t01	Wine grape	extracellular	28.57	68.26
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	75.19	67.42
TraesCS5D01G548700.1	Wheat	plastid	65.16	66.5
TraesCS5B01G539600.1	Wheat	plastid	64.41	65.73
HORVU3Hr1G094050.3	Barley	plastid	76.19	65.38
GSMUA_Achr5P25160_001	Banana	plastid	64.41	65.23
KXG30261	Sorghum	plastid	67.67	64.9
CDY57537	Canola	plastid	65.91	64.3
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	64.16	64.16
TraesCS4A01G326700.1	Wheat	plastid	65.66	64.06
CDY26509	Canola	plastid	64.66	64.02
CDY43232	Canola	plastid	65.41	63.81
CDX69460	Canola	plastid	64.41	63.77
TraesCS3A01G426800.3	Wheat	plastid	74.44	61.62
Zm00001d050552_P001	Maize	plastid	67.92	61.59
Os02t0504800-01	Rice	plastid	48.87	60.56

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	GO:A0A078FY22	UniProt:A0A078FY22	unigene:Bna.2919	EnsemblPlants:CDY17916
ProteinID:CDY17916	ProteinID:CDY17916.1	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872
GO:GO:0055114	GO:GO:0102786	EnsemblPlantsGene:GSBRNA2T00002263001	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346
ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240	UniPathway:UPA00199
UniParc:UPI000189D7FA	SEG:seg	:	:	:	:

Description

BnaC04g03030DAcyl-[acyl-carrier-protein] desaturase [Source:UniProtKB/TrEMBL;Acc:A0A078FY22]

Coordinates

chrLK032079:-:448019..450809

Molecular Weight (calculated)

45419.1 Da

IEP (calculated)

6.263

GRAVY (calculated)

-0.517

Length

399 amino acids

Sequence
(BLAST)

001: MALKFNPLVS QPYKLASSAR PPVSTFRSPK FLCLASSSSP ALSSKEVESL KKPFTPPREV HLQVLHSMPP QKIEIFKSME DWAEQNLLPH LKDVEKSWQP
101: QDFLPDPASD GFEDQVKELR ERARELPDDY FVVLVGDMIT EEALPTYQTM LNTLDGVRDE TGASPTSWAV WTRAWTAEEN RHGDLLNKYL YLSGRVDMRQ
201: IEKTIQYLIG SGMDPRTENN PYLGFIYTSF QERATFVSHG NTARQAKEHG DLKLAQICGT IAADEKRHET AYTKIVEKLL EIDPDGTVVA FADMMRKKIS
301: MPAHLMYDGR DDNLFDNFSS VAQRLGVYTA KDYADILEFL VGRWRIESLT GLSGEGNKAQ EYLCGLTPRI RRLDERAQAR AKKGPKIPFS WIHDREVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.