CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004778.1-P	Field mustard	plastid	98.75	98.75
CDY17916	Canola	plastid	96.76	97.24
CDX83464	Canola	plastid	96.01	96.73
CDY44250	Canola	plastid	96.01	96.49
AT2G43710.1	Thale cress	plastid	93.02	93.02
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	36.16	88.41
Solyc06g053480.2.1	Tomato	plastid	84.29	85.14
PGSC0003DMT400042118	Potato	plastid	84.29	85.14
KRH71270	Soybean	endoplasmic reticulum, nucleus	81.55	83.63
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	32.92	83.54
VIT_05s0094g00750.t01	Wine grape	plastid	66.08	82.04
KRH50195	Soybean	plastid	81.05	80.85
Zm00001d012033_P002	Maize	mitochondrion	78.05	79.85
EES04113	Sorghum	plastid	77.81	78.59
Os01t0919900-01	Rice	plastid	78.05	78.25
TraesCS3B01G463000.1	Wheat	plastid	76.31	77.86
TraesCS3D01G421700.1	Wheat	plastid	76.06	77.81
CDY34739	Canola	plastid	52.37	77.21
GSMUA_Achr7P22860_001	Banana	plastid	69.33	77.01
GSMUA_Achr8P08750_001	Banana	plastid	67.58	76.77
VIT_12s0034g00180.t01	Wine grape	cytosol	20.2	76.42
Zm00001d042344_P002	Maize	plastid	78.3	76.21
Os04t0379900-01	Rice	plastid	74.06	76.15
EES10606	Sorghum	plastid	73.82	75.51
TraesCS2A01G280700.2	Wheat	plastid	73.82	75.51
TraesCS2D01G279500.2	Wheat	golgi, plastid	73.57	75.26
TraesCS2B01G298000.1	Wheat	plastid	73.57	75.26
Zm00001d025170_P001	Maize	plastid	73.07	74.74
Zm00001d004019_P001	Maize	plastid	72.57	74.23
CDX74242	Canola	plastid	72.82	73.74
CDX92006	Canola	plastid	72.57	73.48
CDX69459	Canola	plastid	72.57	73.3
CDY26510	Canola	plastid	72.57	73.3
TraesCS5D01G131500.1	Wheat	plastid	65.84	69.11
TraesCS5A01G123600.2	Wheat	plastid	66.33	69.09
VIT_12s0034g00190.t01	Wine grape	extracellular	28.68	68.86
HORVU5Hr1G039730.1	Barley	plastid	66.08	68.83
TraesCS5B01G123200.1	Wheat	plastid	65.84	68.57
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	73.82	66.52
HORVU3Hr1G094050.3	Barley	plastid	76.56	66.02
TraesCS5D01G548700.1	Wheat	plastid	64.09	65.73
CDY26509	Canola	plastid	65.34	65.01
GSMUA_Achr5P25160_001	Banana	plastid	63.84	64.97
TraesCS5B01G539600.1	Wheat	plastid	63.34	64.96
KXG30261	Sorghum	plastid	67.33	64.9
CDX69460	Canola	plastid	64.84	64.52
CDY57537	Canola	plastid	65.59	64.3
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	63.59	63.91
CDY43232	Canola	plastid	65.09	63.81
TraesCS4A01G326700.1	Wheat	plastid	64.59	63.33
TraesCS3A01G426800.3	Wheat	plastid	75.06	62.45
Zm00001d050552_P001	Maize	plastid	67.08	61.14
Os02t0504800-01	Rice	plastid	48.13	59.94

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	ProteinID:CAA52786.1	EnsemblPlants:CDX79807	ProteinID:CDX79807	ProteinID:CDX79807.1
InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00132639001
InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11
GO:Q39355	UniProt:Q39355	InterPro:RNR-like	SUPFAM:SSF47240	UniPathway:UPA00199	UniParc:UPI000009CA27
SEG:seg	:	:	:	:	:

Description

BnaA05g03490DAcyl-[acyl-carrier-protein] desaturase [Source:UniProtKB/TrEMBL;Acc:Q39355]

Coordinates

chrLK031819:-:227645..230590

Molecular Weight (calculated)

45485.2 Da

IEP (calculated)

6.438

GRAVY (calculated)

-0.522

Length

401 amino acids

Sequence
(BLAST)

001: MALKLNPLAS QPYKLPSSAR PPISTLRSPK FLCLASSSSP ALSSSTKEVE SLKKPFTPPK EVHVQVLHSM PPQKIEIFKS MEDWAEQNLL THLKDVEKSW
101: QPQDFLPDPA SDGFEDQVKE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AVWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFVS HGNTARQAKE HGDLKLAQIC GTIAADEKRH ETAYTKIVEK LLEIDPDGTV VAFADMMRKK
301: ISMPAHLMYD GRDDKLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIES LSGLSGEGNK AQEYLCGLTP RIRRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.