CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039178.1-P	Field mustard	plastid	96.33	99.75
CDY43232	Canola	plastid	97.31	97.31
AT3G02610.2	Thale cress	plastid	89.49	88.62
AT3G02620.2	Thale cress	plastid	85.09	85.71
CDY26509	Canola	plastid	79.22	80.4
CDX69460	Canola	plastid	79.22	80.4
CDX83464	Canola	plastid	64.3	66.08
CDY17916	Canola	plastid	64.3	65.91
CDX79807	Canola	plastid	64.3	65.59
CDY34739	Canola	plastid	43.52	65.44
CDY44250	Canola	plastid	63.81	65.41
CDX69459	Canola	plastid	62.59	64.48
CDX74242	Canola	plastid	62.35	64.39
CDX92006	Canola	plastid	62.35	64.39
CDY26510	Canola	plastid	62.35	64.23
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.48	63.7
GSMUA_Achr5P25190_001	Banana	mitochondrion	9.78	60.61
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	44.74	57.01
Zm00001d030165_P001	Maize	cytosol	45.97	55.95
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	19.07	53.42
TraesCS2D01G074000.1	Wheat	plastid	50.12	50.62
TraesCS2A01G075300.1	Wheat	mitochondrion	49.88	50.0
KXG38794	Sorghum	plastid	47.19	48.61
HORVU2Hr1G012600.2	Barley	mitochondrion	47.43	48.02
HORVU2Hr1G012780.1	Barley	mitochondrion	47.19	48.01
TraesCS7A01G196500.1	Wheat	plastid	47.19	47.54
Os08t0200100-01	Rice	plastid	46.7	47.28
TraesCS7B01G102300.1	Wheat	plastid	46.94	47.17
TraesCS5B01G235800.1	Wheat	plastid	46.21	47.01
TraesCS5A01G236800.1	Wheat	plastid	45.97	46.53
Zm00001d014498_P001	Maize	plastid	46.21	46.32
Zm00001d024273_P001	Maize	plastid	47.92	46.23
TraesCS5A01G237000.1	Wheat	plastid	45.48	46.04
TraesCS5B01G235900.1	Wheat	plastid	45.72	45.95
TraesCS5A01G237800.1	Wheat	plastid	45.48	45.7
KXG35977	Sorghum	plastid	46.21	45.65
HORVU2Hr1G006990.1	Barley	plastid	45.48	45.48
TraesCS5D01G244700.1	Wheat	plastid	45.23	45.45
TraesCS3D01G413500.1	Wheat	plastid	46.45	45.45
EER88838	Sorghum	plastid	45.48	45.37
Os03t0423300-01	Rice	plastid	46.21	45.22
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	46.21	45.11
Zm00001d021059_P001	Maize	plastid	44.99	44.99
KXG24679	Sorghum	plastid	46.45	44.92
TraesCS3A01G418000.1	Wheat	plastid	45.48	44.39
TraesCS2A01G075500.1	Wheat	plastid	48.17	44.27
HORVU5Hr1G068310.1	Barley	plastid	45.97	43.93
TraesCS2B01G090400.1	Wheat	mitochondrion	47.92	43.56
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	46.21	43.35
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	46.21	42.95
TraesCS2D01G074200.1	Wheat	mitochondrion, plastid	46.94	42.76
Os08t0199400-01	Rice	plastid	43.77	42.72
EER91728	Sorghum	mitochondrion, plastid	44.74	42.66
TraesCS2D01G074100.1	Wheat	mitochondrion	47.19	42.32
TraesCS2A01G075400.1	Wheat	mitochondrion	46.94	42.11
TraesCS2B01G090700.1	Wheat	plastid	40.59	41.81
Zm00001d030328_P001	Maize	mitochondrion	44.25	41.71
OQU92381	Sorghum	plastid	45.72	41.65
Os03t0741000-00	Rice	plastid	24.69	33.67
Os06t0503800-00	Rice	plastid	19.8	33.2

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	GO:A0A078J4B4	UniProt:A0A078J4B4	EnsemblPlants:CDY57537	ProteinID:CDY57537
ProteinID:CDY57537.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00022315001	InterPro:IPR012348	PFAM:PF03405
PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF6	InterPro:RNR-like	SUPFAM:SSF47240	UniPathway:UPA00199
UniParc:UPI000189D7F8	SEG:seg	:	:	:	:

Description

BnaA05g33500DBnaA05g33500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4B4]

Coordinates

chrLK033583:-:38171..40588

Molecular Weight (calculated)

46619.5 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.499

Length

409 amino acids

Sequence
(BLAST)

001: MTMTLPLNST KTTPMKQNPV VAVSSSPSLS LGPSFPRRLR VSCVATSPRK TSEQTHKKTF RPIKEVPNQI THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: ETSWQPQDLL PQTNDEDQFY EQVKELRDRT REIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMQHVER TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHANTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDN LFDHYGAVAQ RIGVYTAMDY AGILEFLLRR WKVESLGVGL TGEGRRAQEY LCSLPQRITR LEERANDRVK LGSRPSVAFS
401: WIYGREVGL

Best Arabidopsis Sequence Match ( AT3G02610.2 )
(BLAST)

001: MKMALLLNST ITVAMKQNPL VAVSFPRTTC LGSSFSPPRL LRVSCVATNP SKTSEETDKK KFRPIKEVPN QVTHTITQEK LEIFKSMENW AQENLLSYLK
101: PVEASWQPQD FLPETNDEDR FYEQVKELRD RTKEIPDDYF VVLVGDMITE EALPTYQTTL NTLDGVKDET GGSLTPWAVW VRAWTAEENR HGDLLNKYLY
201: LSGRVDMRHV EKTIQYLIGS GMDSKFENNP YNGFIYTSFQ ERATFISHGN TAKLATTYGD TTLAKICGTI AADEKRHETA YTRIVEKLFE IDPDGTVQAL
301: ASMMRKRITM PAHLMHDGRD DDLFDHYAAV AQRIGVYTAT DYAGILEFLL RRWEVEKLGM GLSGEGRRAQ DYLCTLPQRI RRLEERANDR VKLASKSKPS
401: VSFSWIYGRE VEL

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.