Factsheet for HORVU3Hr1G092740.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	99.09	100.0
TraesCS3D01G413500.1	Wheat	plastid	81.82	86.12
TraesCS3B01G453200.2	Wheat	mitochondrion, plastid	80.91	84.96
TraesCS3A01G418000.1	Wheat	plastid	80.91	84.96
Os03t0423300-01	Rice	plastid	67.27	70.81
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	47.95	65.73
OQU92381	Sorghum	plastid	65.0	63.7
HORVU5Hr1G068310.1	Barley	plastid	56.36	57.94
HORVU3Hr1G091320.2	Barley	plastid	44.77	52.12
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.32	51.71
HORVU2Hr1G012780.1	Barley	mitochondrion	46.36	50.75
HORVU5Hr1G039730.1	Barley	plastid	44.09	50.39
GSMUA_Achr5P25190_001	Banana	mitochondrion	7.5	50.0
HORVU2Hr1G012600.2	Barley	mitochondrion	45.68	49.75
Bra039178.1-P	Field mustard	plastid	42.95	47.85
AT3G02620.2	Thale cress	plastid	43.41	47.04
HORVU2Hr1G006990.1	Barley	plastid	43.64	46.94
AT5G16230.1	Thale cress	plastid	42.73	46.88
AT3G02610.2	Thale cress	plastid	43.86	46.73
CDY26509	Canola	plastid	42.73	46.65
CDX69460	Canola	plastid	42.73	46.65
Bra008632.1-P	Field mustard	plastid	42.73	46.65
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	42.27	46.62
CDY57537	Canola	plastid	42.95	46.21
CDY43232	Canola	plastid	42.73	45.97
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	43.41	42.92
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	14.09	42.47
HORVU3Hr1G094050.3	Barley	plastid	43.64	41.29

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A287MAQ7	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G092740
EnsemblPlants:HORVU3Hr1G092740.3	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF14
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000B47F991	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:640172008..640173714

Molecular Weight (calculated)

48265.5 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.172

Length

440 amino acids

Sequence
(BLAST)

001: ASSVHVREDL LLLLQQERRG LGEGHAPRVD APSCKLWMQV HACNAIYATF ELYTCSSNNY VRFAAASLAT RWTAAAAAAV EAPARSIDVG FAPVPREQAE
101: MVQSLNGWVA ENMLPLLSPV ESSWQPHDFL PCSAAPPGAS EEEALSAFME GVAALRAGAA GVPDEVLVCL VGNMVTEEAL PSYQSMGNRT EGIADDTGAS
201: GLPWAQWLRG WTAEENRHGD LLNRYLYLSG RVDMRQVETT VHHLLRNGME MLVPKSPYHS VIYGAFQERA TFVSHVNTAR LAGQHGDQAL AKICGVIAAD
301: EKRHEAGYTR VSAKLFEVDP DGIVRALAHV MRGKVTMPGL LMSDGRDAES SLFDRFSAVA QRAGVYTARD YGDLVEHFVR RWRVAELAGL SGEGRRAQEY
401: VCGLPPKIRR MEELAHQKAA RSELRPARFS WIFGRHVMVG

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.