Factsheet for HORVU2Hr1G006990.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
MultiLoc:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	57.21	72.9
TraesCS2D01G074000.1	Wheat	plastid	72.13	72.84
TraesCS2A01G075300.1	Wheat	mitochondrion	71.39	71.57
HORVU2Hr1G012780.1	Barley	mitochondrion	69.68	70.9
HORVU2Hr1G012600.2	Barley	mitochondrion	68.95	69.8
GSMUA_Achr6P01210_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.85	55.82
GSMUA_Achr5P25190_001	Banana	mitochondrion	8.56	53.03
HORVU3Hr1G091320.2	Barley	plastid	44.74	48.41
Bra039178.1-P	Field mustard	plastid	45.23	46.84
AT5G16230.1	Thale cress	plastid	45.48	46.38
HORVU5Hr1G039730.1	Barley	plastid	43.52	46.23
CDX69460	Canola	plastid	45.23	45.91
CDY26509	Canola	plastid	45.23	45.91
Bra008632.1-P	Field mustard	plastid	45.23	45.91
AT3G02610.2	Thale cress	plastid	46.21	45.76
CDY57537	Canola	plastid	45.48	45.48
CDY43232	Canola	plastid	45.23	45.23
AT3G02620.2	Thale cress	plastid	44.74	45.07
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	42.79	43.86
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	46.7	43.81
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	46.94	43.64
HORVU5Hr1G068310.1	Barley	plastid	43.77	41.82
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	44.99	41.35
HORVU3Hr1G094050.3	Barley	plastid	45.72	40.22
PGSC0003DMT400041719	Potato	cytosol, peroxisome, plastid	13.94	39.04

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A287GZY1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G006990
EnsemblPlants:HORVU2Hr1G006990.1	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155	PANTHER:PTHR31155:SF10
InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000B46518B	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:14409948..14411177

Molecular Weight (calculated)

41120.2 Da

IEP (calculated)

9.798

GRAVY (calculated)

-0.316

Length

409 amino acids

Sequence
(BLAST)

001: IAMSSPSEAD RLRXXXXSDH ATARLRPSAS STSASPSSSP CLHQAKLTFS ARRPKPRRRR QRILPXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD
101: LLPDPASLGA DGFHAACCDI RARAACLPDA HLVCLVGNMV TEEALPSYQS MANRFEAVHD LTGSSGTAWA RWTRGWSAEE NRHGDVLNRY LFLSGRVDMP
201: QVERTIHNLI NSGMVLKAAR SPYHGFIYVA FQERATSISH GNMARRAKEH GDLALARICG AIAADEKRHE LAYTRIVGKL FEVDPDGAVR ALAYMMRRRI
301: VMPASLMNDG RDGDLFAHYG AVAQQAGIYT ASDYRSILEH LIKQWGVEEL AAAGLSDEGR RARDYVCALP QKIRMLEEKA HQRSAQKAQP IKSASFSWIF
401: DRPVRITMA

Best Arabidopsis Sequence Match ( AT3G02610.1 )
(BLAST)

001: MALLLNSTIT VAMKQNPLVA VSFPRTTCLG SSFSPPRLLR VSCVATNPSK TSEETDKKKF RPIKEVPNQV THTITQEKLE IFKSMENWAQ ENLLSYLKPV
101: EASWQPQDFL PETNDEDRFY EQVKELRDRT KEIPDDYFVV LVGDMITEEA LPTYQTTLNT LDGVKDETGG SLTPWAVWVR AWTAEENRHG DLLNKYLYLS
201: GRVDMRHVEK TIQYLIGSGM DSKFENNPYN GFIYTSFQER ATFISHGNTA KLATTYGDTT LAKICGTIAA DEKRHETAYT RIVEKLFEID PDGTVQALAS
301: MMRKRITMPA HLMHDGRDDD LFDHYAAVAQ RIGVYTATDY AGILEFLLRR WEVEKLGMGL SGEGRRAQDY LCTLPQRIRR LEERANDRVK LASKSKPSVS
401: FSWIYGREVE L

Arabidopsis Description

Plant stearoyl-acyl-carrier desaturase family protein [Source:UniProtKB/TrEMBL;Acc:A0A178V7P2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.