Factsheet for HORVU5Hr1G039730.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G123200.1	Wheat	plastid	97.66	97.66
TraesCS5A01G123600.2	Wheat	plastid	97.4	97.4
TraesCS5D01G131500.1	Wheat	plastid	96.62	97.38
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	82.34	79.45
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	33.77	79.27
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	31.69	77.22
PGSC0003DMT400002555	Potato	plastid	70.91	69.47
Solyc06g053480.2.1	Tomato	plastid	71.43	69.27
VIT_00s0499g00030.t01	Wine grape	plastid	70.65	69.21
Solyc03g063110.2.1	Tomato	plastid	70.13	68.7
PGSC0003DMT400042118	Potato	plastid	70.65	68.51
KRH71270	Soybean	endoplasmic reticulum, nucleus	68.83	67.77
Solyc11g008680.1.1	Tomato	plastid	68.57	67.18
CDY44250	Canola	plastid	69.35	66.92
Bra000321.1-P	Field mustard	plastid	69.09	66.83
GSMUA_Achr7P22860_001	Banana	plastid	62.6	66.76
CDY17916	Canola	plastid	69.09	66.67
PGSC0003DMT400041874	Potato	plastid	68.05	66.67
CDX83464	Canola	plastid	68.83	66.58
KRH50195	Soybean	plastid	69.35	66.42
VIT_05s0094g00750.t01	Wine grape	plastid	55.58	66.25
KXG30261	Sorghum	plastid	71.43	66.11
CDX79807	Canola	plastid	68.83	66.08
Bra004778.1-P	Field mustard	plastid	68.57	65.84
GSMUA_Achr8P08750_001	Banana	plastid	60.26	65.72
AT2G43710.1	Thale cress	plastid	68.31	65.59
VIT_12s0034g00180.t01	Wine grape	cytosol	17.92	65.09
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	74.55	64.49
Zm00001d050552_P001	Maize	plastid	71.43	62.5
Os02t0504800-01	Rice	plastid	52.21	62.42
HORVU3Hr1G091320.2	Barley	plastid	59.22	60.32
HORVU3Hr1G094050.3	Barley	plastid	71.69	59.35
GSMUA_Achr5P25160_001	Banana	plastid	59.48	58.12
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	46.75	56.07
VIT_12s0034g00190.t01	Wine grape	extracellular	22.08	50.9
HORVU2Hr1G012780.1	Barley	mitochondrion	48.83	46.77
HORVU2Hr1G012600.2	Barley	mitochondrion	48.83	46.53
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	50.39	44.5
HORVU5Hr1G068310.1	Barley	plastid	49.09	44.16
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	50.39	44.09
HORVU2Hr1G006990.1	Barley	plastid	46.23	43.52

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A287QWA9	InterPro:FADS-2_CS	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300
GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G039730	EnsemblPlants:HORVU5Hr1G039730.1	InterPro:IPR012348	PFAM:PF03405
PIRSF:PIRSF000346	ScanProsite:PS00574	PANTHER:PTHR31155	PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240
UniParc:UPI000B463E96	:	:	:	:	:

Description

Acyl-[acyl-carrier-protein] desaturase [Source:UniProtKB/TrEMBL;Acc:A0A287QWA9]

Coordinates

chrchr5H:+:289444110..289446880

Molecular Weight (calculated)

43663.2 Da

IEP (calculated)

6.323

GRAVY (calculated)

-0.381

Length

385 amino acids

Sequence
(BLAST)

001: MYLMACMPSC GTFHAPLVSS CLRRKFTVVA TASKAKVGTP GKAFTQVQFA QPFPPEKKEV FDSLERWAED NILVLLKPVE KSWQPQDYLP DPSSDGFYDE
101: VKELRERAKE IPDDYLVCLV GDMVTEEALP TYQTMLNILD GGVGDDTGTS PASWAVWTRA WTAEENRHGD LMNKYMYLTG RVDMRQIEKT IQYLLGAGMD
201: PKTEGNPYQG YIYTSFQERA TFISHGNTAR HARKYGDLKL AQVCGTIAAD EKRHETAYTK IVEKLFEVDP DYTVLAFAAM MRKKVTMPAH LMYDGQDDNL
301: FEHFSAVAQR LGVYTAMDYA DILEFLVQRW NVANLTGLSG EGRRAQDFLC SLGPRFRKLE ERAQGRAKQL PVVPFSWIHG RQVQL

Best Arabidopsis Sequence Match ( AT2G43710.1 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKEVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.