Factsheet for HORVU3Hr1G094050.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G463000.1	Wheat	plastid	83.01	98.22
TraesCS3D01G421700.1	Wheat	plastid	82.8	98.21
Os01t0919900-01	Rice	plastid	75.27	87.5
Zm00001d012033_P002	Maize	mitochondrion	73.55	87.24
EES04113	Sorghum	plastid	74.19	86.9
GSMUA_Achr8P00820_001	Banana	cytosol, nucleus, peroxisome	30.54	86.59
Zm00001d042344_P002	Maize	plastid	73.33	82.77
GSMUA_Achr6P27590_001	Banana	nucleus, peroxisome, plastid	27.31	80.38
Solyc06g053480.2.1	Tomato	plastid	66.88	78.34
TraesCS3A01G426800.3	Wheat	plastid	81.08	78.22
PGSC0003DMT400042118	Potato	plastid	66.24	77.58
CDY44250	Canola	plastid	66.24	77.19
Bra000321.1-P	Field mustard	plastid	65.81	76.88
CDX83464	Canola	plastid	65.81	76.88
VIT_00s0499g00030.t01	Wine grape	plastid	64.73	76.59
Solyc03g063110.2.1	Tomato	plastid	64.73	76.59
PGSC0003DMT400002555	Potato	plastid	64.73	76.59
Bra004778.1-P	Field mustard	plastid	66.02	76.56
CDX79807	Canola	plastid	66.02	76.56
VIT_12s0034g00180.t01	Wine grape	cytosol	17.42	76.42
CDY17916	Canola	plastid	65.38	76.19
KRH71270	Soybean	endoplasmic reticulum, nucleus	63.87	75.96
GSMUA_Achr7P22860_001	Banana	plastid	58.71	75.62
AT2G43710.1	Thale cress	plastid	65.16	75.56
VIT_05s0094g00750.t01	Wine grape	plastid	52.47	75.54
KRH50195	Soybean	plastid	64.52	74.63
Solyc11g008680.1.1	Tomato	plastid	62.8	74.3
PGSC0003DMT400041874	Potato	plastid	62.37	73.79
GSMUA_Achr8P08750_001	Banana	plastid	55.91	73.65
HORVU5Hr1G039730.1	Barley	plastid	59.35	71.69
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	66.24	69.21
GSMUA_Achr5P25160_001	Banana	plastid	56.56	66.75
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	56.99	66.42
HORVU3Hr1G091320.2	Barley	plastid	52.47	64.55
VIT_12s0034g00190.t01	Wine grape	extracellular	22.15	61.68
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	39.14	56.7
HORVU2Hr1G012780.1	Barley	mitochondrion	42.37	49.01
HORVU2Hr1G012600.2	Barley	mitochondrion	42.37	48.76
HORVU2Hr1G006990.1	Barley	plastid	40.22	45.72
HORVU5Hr1G068310.1	Barley	plastid	40.65	44.16
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	41.29	44.04
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	41.29	43.64

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	UniProt:A0A287MCL6	ncoils:Coil	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:HORVU3Hr1G094050	EnsemblPlants:HORVU3Hr1G094050.3	InterPro:IPR012348	PFAM:PF03405	PIRSF:PIRSF000346	PANTHER:PTHR31155
PANTHER:PTHR31155:SF11	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI000B488E26	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:644883615..644888023

Molecular Weight (calculated)

51946.2 Da

IEP (calculated)

9.369

GRAVY (calculated)

-0.444

Length

465 amino acids

Sequence
(BLAST)

001: ACRPRSHRSA TQDTAAPRGH TPAPHRIAIS LSLSLSLSLS APRHHTHLSP SAPRRRRRTT ATAALGSPPA MASRMALRPH AVTPPLSAAG RAARRTGSLR
101: VLAVASSASA SAKVESKKTF APPKEVHVQV THSMPPQKME IFQSLDGWAR DNLLLHLKPV EKCWQPQDFL PDPASDGFHD EVKELRERAK EIPDDYLVCL
201: VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTAWAVWTRA WTAEENRHGD LLNKYLYLTG RVDMRQIEKT IQYLIGSGMD PRTENNPYLG FIYTSFQERA
301: TFISHGNTAR HAKDFGDLKL AQICGIIASD EKRHETAYTK IVEKLFEIDP DGTVLALADM MRKKIAMPAH LMFDGQDEKL FDHFSMVAQR LGVYTARDYA
401: DILEFLVGRW KVPELTGLSG EGHKAQDYLC TLAGRIRKLD ERAQSRAKQA GKMPFSWVYG REVQM

Best Arabidopsis Sequence Match ( AT2G43710.2 )
(BLAST)

001: MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW
101: QPQDFLPDPA SDGFEDQVRE LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE ENRHGDLLNK YLYLSGRVDM
201: RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK
301: ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ
401: L

Arabidopsis Description

FAB2Stearoyl-[acyl-carrier-protein] 9-desaturase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22832]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.