Factsheet for HORVU3Hr1G091320.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G403800.1	Wheat	plastid	96.56	95.55
TraesCS3A01G408700.1	Wheat	mitochondrion, plastid	95.5	95.5
Zm00001d012221_P001	Maize	plastid	86.51	86.05
EES01858	Sorghum	mitochondrion, plastid	85.71	85.26
Os01t0880800-01	Rice	plastid	85.19	84.51
GSMUA_Achr8P32640_001	Banana	cytosol	58.99	81.69
GSMUA_Achr7P03060_001	Banana	plastid	61.64	73.97
KRH15948	Soybean	cytosol, nucleus	64.02	71.81
Solyc06g059700.2.1	Tomato	cytosol	25.66	68.31
VIT_18s0001g15460.t01	Wine grape	plastid	69.84	67.87
PGSC0003DMT400079078	Potato	cytoskeleton, peroxisome, plastid	45.5	66.15
VIT_10s0003g04810.t01	Wine grape	cytosol	20.9	65.83
AT1G43800.1	Thale cress	plastid	66.4	64.19
KRH18113	Soybean	plastid	62.43	62.43
PGSC0003DMT400013389	Potato	cytosol	42.33	61.78
PGSC0003DMT400079076	Potato	cytosol, peroxisome, plastid	20.9	61.72
HORVU7Hr1G040140.1	Barley	cytosol, nucleus, peroxisome	51.59	60.75
Solyc01g009960.2.1	Tomato	plastid	48.15	60.47
Solyc06g054670.1.1	Tomato	plastid	60.32	60.16
PGSC0003DMT400079085	Potato	plastid	60.85	59.43
HORVU5Hr1G039730.1	Barley	plastid	60.32	59.22
PGSC0003DMT400079075	Potato	plastid	60.58	58.72
PGSC0003DMT400095159	Potato	plastid	58.73	57.81
Solyc06g059720.2.1	Tomato	plastid	58.2	56.85
Solyc06g059710.2.1	Tomato	plastid	57.67	56.33
HORVU2Hr1G068670.2	Barley	mitochondrion, plastid	65.61	55.73
KRH18114	Soybean	cytosol	55.03	55.47
HORVU5Hr1G123110.1	Barley	mitochondrion, plastid	57.94	54.89
HORVU3Hr1G094050.3	Barley	plastid	64.55	52.47
HORVU2Hr1G012780.1	Barley	mitochondrion	51.32	48.26
VIT_07s0005g03820.t01	Wine grape	nucleus, peroxisome, plastid	33.86	47.94
HORVU2Hr1G012600.2	Barley	mitochondrion	51.06	47.77
PGSC0003DMT400079080	Potato	plastid	27.25	46.82
HORVU3Hr1G061520.7	Barley	cytosol, peroxisome	52.12	45.18
HORVU3Hr1G092740.3	Barley	cytosol, peroxisome	52.12	44.77
HORVU2Hr1G006990.1	Barley	plastid	48.41	44.74
HORVU5Hr1G068310.1	Barley	plastid	49.74	43.93

Protein Annotations

Gene3D:1.10.620.20	MapMan:5.1.7.1	InterPro:Fatty_acid_desaturase-2	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0045300	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:HORVU3Hr1G091320	EnsemblPlants:HORVU3Hr1G091320.2	InterPro:IPR012348	UniProt:M0XMW5	PFAM:PF03405	PIRSF:PIRSF000346
PANTHER:PTHR31155	PANTHER:PTHR31155:SF6	InterPro:RNR-like	SUPFAM:SSF47240	UniParc:UPI00029505B3	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:635115456..635117317

Molecular Weight (calculated)

42391.7 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.324

Length

378 amino acids

Sequence
(BLAST)

001: MQAQSILRVP GHPAAALPLP RRQCRRVSAV AAAPSVQRGV THSMPPEKAE VFQSLRGWAG SSLLPLLRPV EDIWQPADFL PDSSSEMFEH EVAELRARAA
101: ALPDEYFVVL VGDMVTEEAL PTYQTMINTL DGVRDETGAS ACPWAVWTRA WTAEENRHGD VLNKYMYLSG RVDMRMVEKT VQYLIGSGMD PRTENNPYLG
201: FVYTSFQERA TAVSHGNTAR LAKAHGDDVL ARACGTIAAD EKRHETAYSR IVEQLLRLDP DGAMLAIADM MRKRITMPAH LMHDGSDMDL FEHFASVAQR
301: LGVYTAQDYT DIVEFLVKRW KLETLEGGLS GEGRRARDFV CGLAPRMRRA AERAADRARK DEPRKVKFSW IFDREVVV

Best Arabidopsis Sequence Match ( AT1G43800.1 )
(BLAST)

001: MLAHKSLLSF TTQWATLMPS PSTFLASRPR GPAKISAVAA PVRPALKHQN KIHTMPPEKM EIFKSLDGWA KDQILPLLKP VDQCWQPASF LPDPALPFSE
101: FTDQVRELRE RTASLPDEYF VVLVGDMITE DALPTYQTMI NTLDGVRDET GASESAWASW TRAWTAEENR HGDLLRTYLY LSGRVDMLMV ERTVQHLIGS
201: GMDPGTENNP YLGFVYTSFQ ERATFVSHGN TARLAKSAGD PVLARICGTI AADEKRHENA YVRIVEKLLE IDPNGAVSAV ADMMRKKITM PAHLMTDGRD
301: PMLFEHFSAV AQRLEVYTAD DYADILEFLV GRWRLEKLEG LTGEGQRAQE FVCGLAQRIR RLQERADERA KKLKKTHEVC FSWIFDKQIS V

Arabidopsis Description

S-ACP-DES6Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84VY3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.